Psol006114.1
Basic Information
- Insect
- Phenacoccus solenopsis
- Gene Symbol
- bab2
- Assembly
- GCA_009761765.1
- Location
- chr3:44275273-44279221[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 4.1e-12 2.5e-09 36.1 0.0 1 39 446 485 446 489 0.90 2 4 3.7e-12 2.3e-09 36.2 0.1 2 39 501 538 500 541 0.92 3 4 2.7e-18 1.7e-15 55.9 0.0 2 45 556 600 555 600 0.97 4 4 1.8e-16 1.1e-13 50.1 0.0 2 43 608 650 607 651 0.95
Sequence Information
- Coding Sequence
- ATGGCCAATATCGGACAACATTATTGTTTACGATGGAATAATTATCAGTCAAACATGACTTCGGTGTTTTATCAGCTCTTACGAACCGAGGCATTTGTAGATGTGACTTTAACATGCAACGAAAACTCTTTGAAAGCTCATAAAGTTGTCCTATCGGCATGTTCATCCTATTTTCAAAAATTATTAATGGATAACCCGTGCAAACACCCAACAATAATTTTACCTCAAGAAGTTGGCTTTAACGACTTAAAATTTATCATAGAATTTGTATATCGTGGAGAAATCGACGTTTCACAAGCCGAATTACAGTCGTTACTTAAAACAGCCGATCAGTTGAAAATCAAAGGTTTATGCGAAGTACCAGAAGGCGAAGAAGATGAAATGGATGATAACGGAGAATCGGTAACCGACGTGAATGTTTTAGGATCTCAAATGATGCAAGATAAATCTCAAAAACAGAAATTATTTAATAAATTAAGAAGTAAATTTCCCGCTCAAATTAAACGTAAAGTATCACAAGAAGCGAACGGTTCTCGCAAATATTATATCAAAGAAAGTAAAACTGTCGAACAAGGCGTACAGTTGATACAAACCACAACTATAAATCCAAACGATATTCTAGACACAAGTAATACTCAGCAGTATCATAATTTACAACCAGCTAATTGTATCACGGTGGCTACATCCACCGAAGAAGACGATAAAAATAAATCCGCCGGCAACGTACCTGTGGTCATTTTAGATAACCGCCATCAACAACAAATATCCGTTCCTTCTTCTTTACACTTCGTACAAAATAATCAACAGCCTCAAAGATGTCAGCAAACTGAGAAAATCATCATGACCAGTCCATCACCTATTATGACCTCGTGTACTACTTTGACAACGCTACAACCGCAACAACCTTTGATGTTGGATCAAAGTACACATCAGCATTTGAGTCAACAAAGACAAAATCCAGACGATGACAAATCTAGAGAAGTAGAAATGATGTCAGAAGCGCAACCTCCTGGGCCAACCGCCACACCGGTACCGGTTCATTGTCACTCTATGGATATGCAACAGCATAGTCCTACTCATCGTGATATCGCTGTGGACACATCTGGAATGCCATCAGATAATATCAAAGTTAAATTTGAAACTTTAAGAACCATGGATCAAACTTCAGAAAGCATGGATACTATTGAAAACCACATGTCTGAACATCATACAATGCAAACGATGATGATCACGCCAGAATTATTAGGATTAATACCTTCCACTTCATCGGCACCGTCTTCAGAAGTGGGAAGTGATAATGGTAAAAATAACATGTCAATGTCGAAAAAAGATTGGACCCAAGAAGACATGGACGCTGCCCTAGATGCCCTACGAAACCATCACATGAGTCTAACCAAAGCATCACTAACTTATGGTATTCCATCAACCACGTTATGGCAGAGAGCTCATCGACTCGGTATCGATACTCCAAAAAAGGATGGACCTTCTAAATCTTGGAATGAAGACGTACTAAACGTTGCATTGGAAGCTTTAAGAACCGGTTCACTTAGTGCCAATAAAGCCAGTAAAGCTTACGGTATTCCGAGTAGCACTTTGTATAAAATTGCTCGTCGAGAAGGTATTCGCTTAGCAGCTCCATTCAACGCAGCTCCCACTACATGGAGTCAAGAAGACCTGGAAAGAGCTTTAGAAGCTATTAGAACAGGTCAGACTACCGTTCAAAAAGCAGCCACAGAATTCGGCATACCTACGGGCACATTGTACGGACGTTGTAAGCGAGAAAAGATTGAATTATCGCGCAGCAATCCTACGCCTTGGTCTCAAGATGCCATGACAGAAGCTTTAGAAGCGATTAGATTGGGTCAGATGAGTATAAATCAAGCCTCTATTCATTTCAATTTGCCATATTCTTCGCTATACGGTAGATTTAGACGAGGTAAATACGAAGCCGATCATCCAGATCATGAAGAAGATAACGTATCTAATGTCGACGTTCAACAAGCTAATTCGCAGTCGATGGTTCAACACAGCGAACTTCAGCCAGAACCGCAGACTGCATCGCAACAGCCTCAACAGTCCACCATTCAACCGCAAATCATGCTGTTGCAATATCAGCACACTCCAACCACGCACATTCAAATGTATCAACCTGCGGCGCCTAGTTGA
- Protein Sequence
- MANIGQHYCLRWNNYQSNMTSVFYQLLRTEAFVDVTLTCNENSLKAHKVVLSACSSYFQKLLMDNPCKHPTIILPQEVGFNDLKFIIEFVYRGEIDVSQAELQSLLKTADQLKIKGLCEVPEGEEDEMDDNGESVTDVNVLGSQMMQDKSQKQKLFNKLRSKFPAQIKRKVSQEANGSRKYYIKESKTVEQGVQLIQTTTINPNDILDTSNTQQYHNLQPANCITVATSTEEDDKNKSAGNVPVVILDNRHQQQISVPSSLHFVQNNQQPQRCQQTEKIIMTSPSPIMTSCTTLTTLQPQQPLMLDQSTHQHLSQQRQNPDDDKSREVEMMSEAQPPGPTATPVPVHCHSMDMQQHSPTHRDIAVDTSGMPSDNIKVKFETLRTMDQTSESMDTIENHMSEHHTMQTMMITPELLGLIPSTSSAPSSEVGSDNGKNNMSMSKKDWTQEDMDAALDALRNHHMSLTKASLTYGIPSTTLWQRAHRLGIDTPKKDGPSKSWNEDVLNVALEALRTGSLSANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWSQEDLERALEAIRTGQTTVQKAATEFGIPTGTLYGRCKREKIELSRSNPTPWSQDAMTEALEAIRLGQMSINQASIHFNLPYSSLYGRFRRGKYEADHPDHEEDNVSNVDVQQANSQSMVQHSELQPEPQTASQQPQQSTIQPQIMLLQYQHTPTTHIQMYQPAAPS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00005683;
- 90% Identity
- iTF_01177853;
- 80% Identity
- iTF_01177853;