Psol003416.1
Basic Information
- Insect
- Phenacoccus solenopsis
- Gene Symbol
- cnc
- Assembly
- GCA_009761765.1
- Location
- chr2:29015974-29025268[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 8.7 7.3e+03 -3.5 0.7 40 46 342 348 331 356 0.49 2 3 5.6e-17 4.7e-14 51.5 6.3 3 58 390 445 388 452 0.91 3 3 1.4 1.2e+03 -1.0 0.1 14 27 501 514 497 515 0.85
Sequence Information
- Coding Sequence
- ATGGATGATGGATTGAGTCGAGTGATACCGCCTTATATGCGAACAATGGGTATGGATCACAGATGGCAAGACTTCGCCAGCATGATGAATTTCCCCGAGACAAATCATTCGTCCGCCTACCACCATCATCATCACTATCACCATCCGTCGGCGGCCTCCAATTACTCTTCGGTTGGATCATCGTACCAGCCTCACGTGCAGCTAACCCCTACGGCGGAGGGTAATTCTCGAAACGCTTTGCTACACAATTCTTCGTTGTCTACGTCATTAACGGATTTGAACAATACCCCGTCGTATCCGTCTTTAAATAACAGCTGTAGCATTGGTACTACTGTAGCAAATTCTATGAATTTAACCAATAACACGGTAACCGAAACCGTTATCACGTCGGATAACACGGCTCCTGTATTCAAAGTGGAACCCAGTCATCAGGAATCCATTTACCCTTACCAAAATGGTTGTGCGGAGATGAATCAAAATACAGAAGGTTTTTTGTCTTCGATTTTAAACGACGAAGATTTCCAGTTGATGGATATGGCCGTGAACGAAGGAATGTACCCAATGCGTATGTTAGACAATGGTTGTAGCGTTGCTCAAAACTGCATCGAACGCGGAACTGATTCAGACAGCGCCGTTAGTTCTATGGGTTCGGAAAGAGTCCCATCTTTATCATCGGATACCGAATGGATGGAGACAAATTCAGATTCCGGACATACTCCAGCCGATCATTATTCGTCAGATTATTGCAACAAGTATCGATGGTATGACAGTTACATGTACACTGCGAGGGGACATTCCGCTGGTGAAAGCTCACCGAATAGTACGTCATCGCGGTTGTCTCAATTACCGCAGAAAAAATACCAGCTCTATGGTCGAAGATGCTTTCAAGACCAGAACGCAAATAACCATATAATGCATAATCATACATACCCGATGCCGCCTGAGTCAATGAACGGTGCTAGTGGAACTGTACAGAAATCTATTTATAGGGATAAGTTGAAATCTAAGTCAGCACGTAGAAGCGAAGAGGAACAACTCACTAGGGACGAAAAGAAGGCCCGTAATCTTAATATACCAATTTCGGTATACGATATTATTAATTTACCAATGGATGAATTCAATGAAAGATTATCCAAATACGATCTCTCTGAAAATCAATTATCCTTAATCAGGGATATTAGAAGAAGAGGAAAAAATAAAGTTGCCGCGCAAAATTGCAGAAAACGTAAATTAGATCAAATTATGAGCTTAGCCGACGAAGTGAAACAAATGAAAGATAGGAAACAAAAACTGCATCAAGAAAGAGATTTCCTCATCTCAGAAAAGCAAAGAGTGCAAAGCAGATACGGACAATTATACAGGCATATATTCCAGTCTTTGAGAGACCCAGATGGAAATCCTTTTTCACCTTATGAATTTAGTCTTCAACAAGCAGCAGATGGATCGGTTATTCTAGTACCAAGAAACAGTTCTTCGAATTTACCTCTGGAACTGGATCAATCGTCTGCTCATAATTCTCGGTCAAAAAATAAAGATCAACGTAAACCGTGA
- Protein Sequence
- MDDGLSRVIPPYMRTMGMDHRWQDFASMMNFPETNHSSAYHHHHHYHHPSAASNYSSVGSSYQPHVQLTPTAEGNSRNALLHNSSLSTSLTDLNNTPSYPSLNNSCSIGTTVANSMNLTNNTVTETVITSDNTAPVFKVEPSHQESIYPYQNGCAEMNQNTEGFLSSILNDEDFQLMDMAVNEGMYPMRMLDNGCSVAQNCIERGTDSDSAVSSMGSERVPSLSSDTEWMETNSDSGHTPADHYSSDYCNKYRWYDSYMYTARGHSAGESSPNSTSSRLSQLPQKKYQLYGRRCFQDQNANNHIMHNHTYPMPPESMNGASGTVQKSIYRDKLKSKSARRSEEEQLTRDEKKARNLNIPISVYDIINLPMDEFNERLSKYDLSENQLSLIRDIRRRGKNKVAAQNCRKRKLDQIMSLADEVKQMKDRKQKLHQERDFLISEKQRVQSRYGQLYRHIFQSLRDPDGNPFSPYEFSLQQAADGSVILVPRNSSSNLPLELDQSSAHNSRSKNKDQRKP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01263096;
- 90% Identity
- -
- 80% Identity
- -