Pobe026919.1
Basic Information
- Insect
- Phasia obesa
- Gene Symbol
- pol
- Assembly
- GCA_949628195.1
- Location
- OX451217.1:55559105-55568736[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 1 1.9e+04 -2.6 0.3 1 4 717 720 717 721 0.89 2 10 0.00037 7.1 8.4 16.9 1 18 742 759 742 760 0.98 3 10 3.4e-10 6.4e-06 27.7 14.5 1 19 769 787 769 787 0.98 4 10 0.39 7.3e+03 -1.3 12.8 9 19 832 842 824 842 0.88 5 10 0.025 4.7e+02 2.5 5.2 4 11 856 863 845 864 0.87 6 10 0.69 1.3e+04 -2.1 0.9 6 10 923 927 922 927 0.90 7 10 9.3e-06 0.18 13.5 5.3 1 11 933 943 933 944 0.96 8 10 3 5.7e+04 -5.5 2.1 15 18 957 960 957 961 0.84 9 10 0.0092 1.7e+02 3.9 16.1 3 19 973 989 972 989 0.92 10 10 4.5e-07 0.0086 17.7 12.7 1 18 1040 1059 1040 1060 0.91
Sequence Information
- Coding Sequence
- ATGTCCCAAGTACAGAGGACAAGTTGCGGCGATGTGACGGCAGTCTGTGGAGAGGCTAAAGATGGACAAAGTCTCATTCTAGCCTCGGTCTACATGCCCTATGAGGCCGATAACCCACCGGGCATGATTGTAAAGGAGCTAACCAGGTATGTCAGTAGACGGAAAGCTAACCTGGTACTTGGCTGTGATGCCAATGCTCACCACAGTCAATGGGGAAGCAGTAACATCAACACCAGGGGTGAGTTGGtctttgattttattactaCTAATAACCTTATTATAACTAACAAGGGTAATATTCCGACATTTAGTAATAGGGTTAGGGAGGAAGTTATAGATATCACTTTGACCAACAATAGGGATCTAGTAATAGATTGGAGGGTTTCTACGGACTGCTCCTTTTCGGACCATAGTAGAATTTCCTTCAAACTGAACTTTAGTAAACCAAAGTGTAACCCTTATTTAAATCCCAGGAAAACAAATTGGGATCTATTCAGGGTTAATGTGGAGTCCAAGCTGGTTGTTACTTCCTTATGTGGGCAGTCACAAAGTGAAGTGGGTGCAGTGGTGAAGGTGAAGGTGACACAAGTCTTTAGGGAGAGTTTTGAGCTGTCATGTCCAAGAACCTTCCCGGGCAAAAGGGAACAGCCCTCCTGGTGGACCAAGGATCTAAAGGATCAAAGGTCTACGGTTAGAAGGCTCTTCAACAGGGCAAAACTCACGCGTAAGATTGAGGACTGGGACAGCCATAGAATAGCTTTCAATAAGTACAAGGGATCTCTTAAGAGGGTGAAAAGGGACTCGTGGACTAAGTACTGCGAATCCATTGATTCGGTCAGCGAGTTATCAAGGTTTAGACGTATACTATCCAAGGACCCCAGGGAAATCGGAAATATACAAAAGCTTGATGGCTCATGGACCGAAtctagctctgagaccctggaGCTACTTATGAACACGCACTTCCCGGGCTGTAGTGGGTTACGAGTCGATCATTCGGTTAGGGATTTTTACCCTAGATTGGTAGGGAGATCAGAGGTGGCGATCAAGGATTTAGTAACTGTGGACAAGGTTGCATGGGCGATTAATACCTTCGAGCCTTATAAATCTGCTGGCCCGGATGGTAGTTTTCCGGCCATGATGCAAAACGTCCCGATACATATCTTGAAGCTGTTTAGGGACATCTTTAGGACGTGTTTAGCAAGAGGTGTTATACCCAATTGGTGGAGAGAAGTTCGGGtaatatttattcccaaggcTGGTAAGGCAAGCCACTCGAAGCCAAAGGACTTCAGACCGATTAGCCTATCGTCTTTTCTGTTGAAAACGTTAGAGCGTGTTATCGATCTGCACCTAAGGAACTCAATTGACCAGCACGTCATTAGTGACGCTCAGCATGCTTACCTTAAGGGTAAATCGGTTGAGAGTGCGCTTCATAATGTGGTTAGGTATATTGAGCGCGGCTTACAGGATAAGGAATATACGTTAGCGGCGTTCttagatattgaaggtgccttcaaCAATGTTACTTTGGAGGCTATTAGGGAATCCCTAGTAGATCTTAACATCCAGGACTTCATAGTGGAGTGGATTATCCGTATGCTTAGCAGTAGGATCATCAACTCGGAGCTAGGAGGCGGCTGTTTGCGAAAATTAGTCACTAGGGGTACGCCGCAGGGTGGGGTTCTATCCCCACTACTATGGCTGTTAGTGGTGAATGTCATTTTACGACAATTTGATACACAGGGAAGGAAAATAGTGGCCTACGCAGATGACGTGGTGTTATTGGTGAAAGGGAAATTTCTCTCCACTATCACAGAAGTCATGCAGGCTGCACTTGGGGAGCTCTCATCCTGGGCCTCGAGCAAAGGGTTGGGGGTCAATGGTGATAAAACTGAACTAGTTCTCTTCACCAGGAGATACAAAGTGGTTGGCTTCAAACCACCCAAAGTTAATGGTGTTAAGTTGAAACTAGCAAGCGAGGCTAAATACCTAGGAGTTTATCTGGATAGTAAACTGGTCTGGAGCAGGAACATTCAGGAAAGACTTAAAAAGGGTATAAATGCCTATTATGCCTGCAAGAACTCCATAGGGAAAACTTGGGGCCTACAACCAAAGTGTTTAATTAGAACAAAGAAGAAATGCCGCTGTGGTATGCATGAAAAAGACTTGCCGTGCTTCAAGGAATTTTCTTGTGAAACCAAATGTAAACAGATTCGAGATTGTGGCAAGCATCCTTGTAATCGtaagtGCTGCGATAAAAATTGTCCACCATGTGATAAAGTGTGTGGCAAACCGTTGTCGTGTGGAAAACATAAATGTCAGTCGATTTGTCACAAGGGACCCTGTTATCCCTGCCAGCAAAAATCACAAATCAACTGTCGTtgtggtaaaactaaaaagtatgTTCCATGCGGCCGAGAGCGTACAGCACGTGTAGTTTGTTTGGAACCATGTCGTATCCCCTCAAAATGTCATCATGAAAACAAACATCGCTGTCACAAAAACGAGTGTCCACCTTGCCCACAACCCTGTGGCTTACCAAATGAAACCACCAAGTGCGATCATAAATGTATGGCGAAATGTCATGCATCGGTTAAGGTTGCTAAAAAATCAAGTCCCGATACATCGAGCATATGGGAACCCAATAAACAGTTTGAATATATACAAACGCCCCATCCGCGATGTGAACAAAAAGTAAGCGTTGCTTGCATAGGTGGCCACGAATTAGCCGTTTGGCCCTGTTGGAATTCTAAACCTACATCCTGCCAACGTTTGTGTAACCGTTATCTGCGCTGCGGCAATCATAAATGTTCTTTAGTCTGTCATGTTGTAGAGAATATAAAAGACATGAATGAGCAAACTGGCTGTTCCCCATGTGAAGAAGGTTGTAAGCTTCCTCGACCCGAAGGATGCACTCATAATTGTCCTAGACCATGTCACTTGCCACCTTGTAACCCATGCAGTGTCTTGATTAAGACAAAATGCCATTGTGGCTTAATGCCTGTTATTTACAAGTGTTGCGATTATTTTAATGCAGACGCCAGTGAAGGGGAAACTTtagaaaaacaagaaaacttGAAAAGTTGTGGAAATaggtgtttaaaaaatTACCCATGTGGTCATCGCTGTTCAGCCAAATGTCATTCTGGGCCTTGTCCTTATCCTGAATCTTGTCGCAAAAAAATGCGCATCTACTGTGATTGCAAACGTCTAAAATCTGAAATCTCTTGTGACAAATATCGCGCTGGCCTCGAAAAATTGAAATGCgatgaaaattgttttgaatcacaaaaaaatatcgaaCAAGCACGCCAAACGGAAGAGGAATTACgaagaaaacaagaaaaagagCGCAATCGTTTAGAAGTGGAAcagtttgaaaaaaagtttagcaAGCGAAAACCTAAGGAACGTAAAACATTGGAAGTGAAGCAGAAGAATGATATTAATTGGCAGCTAATTGGGGTGTATACTGGCGTTGTTGCAGCTGTGTTATTAGCAGTTGCTTTAGCTTTTTACGAGGATCGTTAG
- Protein Sequence
- MSQVQRTSCGDVTAVCGEAKDGQSLILASVYMPYEADNPPGMIVKELTRYVSRRKANLVLGCDANAHHSQWGSSNINTRGELVFDFITTNNLIITNKGNIPTFSNRVREEVIDITLTNNRDLVIDWRVSTDCSFSDHSRISFKLNFSKPKCNPYLNPRKTNWDLFRVNVESKLVVTSLCGQSQSEVGAVVKVKVTQVFRESFELSCPRTFPGKREQPSWWTKDLKDQRSTVRRLFNRAKLTRKIEDWDSHRIAFNKYKGSLKRVKRDSWTKYCESIDSVSELSRFRRILSKDPREIGNIQKLDGSWTESSSETLELLMNTHFPGCSGLRVDHSVRDFYPRLVGRSEVAIKDLVTVDKVAWAINTFEPYKSAGPDGSFPAMMQNVPIHILKLFRDIFRTCLARGVIPNWWREVRVIFIPKAGKASHSKPKDFRPISLSSFLLKTLERVIDLHLRNSIDQHVISDAQHAYLKGKSVESALHNVVRYIERGLQDKEYTLAAFLDIEGAFNNVTLEAIRESLVDLNIQDFIVEWIIRMLSSRIINSELGGGCLRKLVTRGTPQGGVLSPLLWLLVVNVILRQFDTQGRKIVAYADDVVLLVKGKFLSTITEVMQAALGELSSWASSKGLGVNGDKTELVLFTRRYKVVGFKPPKVNGVKLKLASEAKYLGVYLDSKLVWSRNIQERLKKGINAYYACKNSIGKTWGLQPKCLIRTKKKCRCGMHEKDLPCFKEFSCETKCKQIRDCGKHPCNRKCCDKNCPPCDKVCGKPLSCGKHKCQSICHKGPCYPCQQKSQINCRCGKTKKYVPCGRERTARVVCLEPCRIPSKCHHENKHRCHKNECPPCPQPCGLPNETTKCDHKCMAKCHASVKVAKKSSPDTSSIWEPNKQFEYIQTPHPRCEQKVSVACIGGHELAVWPCWNSKPTSCQRLCNRYLRCGNHKCSLVCHVVENIKDMNEQTGCSPCEEGCKLPRPEGCTHNCPRPCHLPPCNPCSVLIKTKCHCGLMPVIYKCCDYFNADASEGETLEKQENLKSCGNRCLKNYPCGHRCSAKCHSGPCPYPESCRKKMRIYCDCKRLKSEISCDKYRAGLEKLKCDENCFESQKNIEQARQTEEELRRKQEKERNRLEVEQFEKKFSKRKPKERKTLEVKQKNDINWQLIGVYTGVVAAVLLAVALAFYEDR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -