Pobe026915.1
Basic Information
- Insect
- Phasia obesa
- Gene Symbol
- nfxl1
- Assembly
- GCA_949628195.1
- Location
- OX451217.1:55543484-55552385[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 3 5.7e+04 -8.1 6.4 15 19 157 161 156 161 0.82 2 20 0.2 3.7e+03 -0.3 0.4 4 10 192 198 191 198 0.95 3 20 2.7e-08 0.00051 21.6 16.0 1 18 206 222 206 223 0.98 4 20 2.2 4.2e+04 -3.7 2.1 6 10 249 253 248 253 0.88 5 20 6e-05 1.1 10.9 13.3 3 19 261 278 259 278 0.90 6 20 3 5.7e+04 -6.3 3.0 6 15 297 307 297 308 0.60 7 20 3e-08 0.00056 21.5 13.3 1 19 313 331 313 331 0.99 8 20 1.7 3.2e+04 -3.3 0.5 1 9 356 363 356 363 0.61 9 20 7.8e-08 0.0015 20.1 11.2 1 18 366 383 366 384 0.97 10 20 0.72 1.4e+04 -2.1 0.3 1 4 393 396 393 397 0.89 11 20 0.00026 5 8.9 16.9 1 18 418 435 418 436 0.98 12 20 2.4e-10 4.5e-06 28.2 14.5 1 19 445 463 445 463 0.98 13 20 0.16 3.1e+03 -0.1 12.0 9 19 508 518 499 518 0.89 14 20 0.018 3.3e+02 3.0 5.2 4 11 532 539 521 540 0.87 15 20 0.49 9.3e+03 -1.6 0.9 6 10 599 603 598 603 0.90 16 20 6.5e-06 0.12 14.0 5.3 1 11 609 619 609 620 0.96 17 20 3 5.7e+04 -5.0 2.1 15 18 633 636 633 637 0.84 18 20 0.0065 1.2e+02 4.4 16.1 3 19 649 665 648 665 0.92 19 20 3 5.7e+04 -5.5 2.1 9 13 671 675 670 675 0.72 20 20 3.2e-07 0.006 18.2 12.7 1 18 716 735 716 736 0.91
Sequence Information
- Coding Sequence
- ATGCCgccaactaaaaataaacaacaaaatagcaataaaaattCTGCGGAAAAATTTAATGAGGCTCATGCAAGAAACATTGAAATTGCTAAGAAGCTGGTTGAAAGTTATATATCATCTTCTGAAGATGAGGACGAATTGGATGAGCCAACTATTTTAAAATCCTTATATCAACATTATAGTACGCGCAAGGAAGACGCACATCTTTTAGCGAAGACAGCAagctttttagaaaatattttacaaactggAGCTGCAACATGTCTAATCTGCATAGCAAGCATAAAACGATCAAATGCAATATGGTCTTGCAAATATTGCTATTGCTTCTTTCATTTAAACTGTATTCAAAGGTGGTCCAATGATAGTATGGCACATGCAAAAGCCCTATCTCAGAATGAACCAGGTTACTATAATCATATGGGAGAATATGTACCGCCCAAAAAACCCAAGGCATTGCACTGGTGTTGTCCGCAATGTAGAACAGAGTTTCACCCAGAAGAGAGACCAATAGAATATGAATGCTTTTGTGGCAAAGAAACTAATCCACCATCGCAAACATGGTTAGTTCCTCATTCCTGTGGTGAAATATGTGGCAAAGCTCTACTGCCAAACTGCGGGCATAAATGTACGTTACTATGCCATCCCGGACCTTGTCCGCCTTGTGCACAATACGCTACAACATCGTGTAAATGTGGAAAGTCTCCTTCAAAATCAGTTCGTTGTGCTGATAAGTTGTGGCAGTGCCAGCGGAAATGTGAATTAAAACTACCATGTAAGGAGCATGTCTGTAAAAAGCTTTGTCACAAAGCCGGGCAATGTCCACCTTGCCAACAAACAAGCATGCAACCGTGTGAGTGTGGTAGAGAAACGTCACAACGCCAATGTTGTGAACAGAAATGGCACTGTAAAGGAATCTGTGGAAAACCTTTTGCTTGTGGCATACACGCTTGCGGTAAAATTTGCCATTCTGGTGATTGTGGGGAATGTCCTTTAAGTTTGCCGCGTTCATGTCCATGTGGTAAAACTAAAAAAGTTGGCCCATGTTCGGATATCATTGAAGCTTGTGGTGATACTTGCCAAAAAGTACTAGTGTGCGGTTTGCATACTTGTACACAACGTTGTCATCAAGGCAGTTGTAATGTGTGTTTAATTAGAACAAAGAAGAAATGCCGCTGTGGTATGCATGAAAAAGACTTGCCGTGCTTCAAGGAATTTTCTTGTGAAACCAAATGTAAACAGATTCGAGATTGTGGCAAGCATCCTTGTAATCGtaagtGCTGCGATAAAAATTGTCCACCATGTGATAAAGTGTGTGGCAAACCGTTGTCGTGTGGAAAACATAAATGTCAGTCGATTTGTCACAAGGGACCCTGTTATCCCTGCCAGCAAAAATCACAAATCAACTGTCGTtgtggtaaaactaaaaagtatgTTCCATGCGGCCGAGAGCGTACAGCACGTGTAGTTTGTTTGGAACCATGTCGTATCCCCTCAAAATGTCATCATGAAAACAAACATCGCTGTCACAAAAACGAGTGTCCACCTTGCCCACAACCCTGTGGCTTACCAAATGAAACCACCAAGTGCGATCATAAATGTATGGCGAAATGTCATGCATCGGTTAAGGTTGCTAAAAAATCAAGTCCCGATACATCGAGCATATGGGAACCCAATAAACAGTTTGAATATATACAAACGCCCCATCCGCGATGTGAACAAAAAGTAAGCGTTGCTTGCATAGGTGGCCACGAATTAGCCGTTTGGCCCTGTTGGAATTCTAAACCTACATCCTGCCAACGTTTGTGTAACCGTTATCTGCGCTGCGGCAATCATAAATGTTCTTTAGTCTGTCATGTTGTAGAGAATATAAAAGACATGAATGAGCAAACTGGCTGTTCCCCATGTGAAGAAGGTTGTAAGCTTCCTCGACCCGAAGGATGCACTCATAATTGTCCTAGACCATGTCACTTGCCACCTTGTAACCCATGCAGTGTCTTGATTAAGACAAAATGCCATTGTGGCTTAATGCCTGTTATTTACAAGTGTTGCGATTATTTTAATGCAGACGCCAGTGAAGGGGAAACTTtagaaaaacaagaaaacttGAAAAGTTGTGGAAATaggtgtttaaaaaatTACCCATGTGGTCATCGCTGTTCAGCCAAATGTCATTCTGGGCCTTGTCCTTATCCTGAATCTTGTCGCAAAAAAATGCGCATCTACTGTGATTGCAAACGTCTAAAATCTGAAATCTCTTGTGACAAATATCGCGCTGGCCTCGAAAAATTGAAATGCgatgaaaattgttttgaatcacaaaaaaatatcgaaCAAGCACGCCAAACGGAAGAGGAATTACgaagaaaacaagaaaaagagCGCAATCGTTTAGAAGTGGAAcagtttgaaaaaaagtttagcaAGCGAAAACCTAAGGAACGTAAAACATTGGAAGTGAAGCAGAAGAATGATATTAATTGGCAGCTAATTGGGGTGTATACTGGCGTTGTTGCAGCTGTGTTATTAGCAGTTGCTTTAGCTTTTTACGAGGATCGTTAG
- Protein Sequence
- MPPTKNKQQNSNKNSAEKFNEAHARNIEIAKKLVESYISSSEDEDELDEPTILKSLYQHYSTRKEDAHLLAKTASFLENILQTGAATCLICIASIKRSNAIWSCKYCYCFFHLNCIQRWSNDSMAHAKALSQNEPGYYNHMGEYVPPKKPKALHWCCPQCRTEFHPEERPIEYECFCGKETNPPSQTWLVPHSCGEICGKALLPNCGHKCTLLCHPGPCPPCAQYATTSCKCGKSPSKSVRCADKLWQCQRKCELKLPCKEHVCKKLCHKAGQCPPCQQTSMQPCECGRETSQRQCCEQKWHCKGICGKPFACGIHACGKICHSGDCGECPLSLPRSCPCGKTKKVGPCSDIIEACGDTCQKVLVCGLHTCTQRCHQGSCNVCLIRTKKKCRCGMHEKDLPCFKEFSCETKCKQIRDCGKHPCNRKCCDKNCPPCDKVCGKPLSCGKHKCQSICHKGPCYPCQQKSQINCRCGKTKKYVPCGRERTARVVCLEPCRIPSKCHHENKHRCHKNECPPCPQPCGLPNETTKCDHKCMAKCHASVKVAKKSSPDTSSIWEPNKQFEYIQTPHPRCEQKVSVACIGGHELAVWPCWNSKPTSCQRLCNRYLRCGNHKCSLVCHVVENIKDMNEQTGCSPCEEGCKLPRPEGCTHNCPRPCHLPPCNPCSVLIKTKCHCGLMPVIYKCCDYFNADASEGETLEKQENLKSCGNRCLKNYPCGHRCSAKCHSGPCPYPESCRKKMRIYCDCKRLKSEISCDKYRAGLEKLKCDENCFESQKNIEQARQTEEELRRKQEKERNRLEVEQFEKKFSKRKPKERKTLEVKQKNDINWQLIGVYTGVVAAVLLAVALAFYEDR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01313435;
- 90% Identity
- -
- 80% Identity
- -