Basic Information

Insect: Phasia obesa
Gene Symbol: -
Assembly: GCA_949628195.1
Location: OX451219.1:2700051-2705491[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.0017 0.25 13.4 1.0 1 23 120 142 120 142 0.98

2 14 1.8 2.8e+02 3.9 2.4 1 23 148 171 148 171 0.93

3 14 1.2e-05 0.0018 20.2 1.2 2 23 382 403 381 403 0.97

4 14 6.8 1e+03 2.1 4.3 1 23 409 432 409 432 0.93

5 14 0.021 3.2 10.0 1.6 1 23 454 477 454 477 0.98

6 14 0.0001 0.016 17.2 2.3 2 23 736 757 735 757 0.96

7 14 0.23 35 6.7 3.1 1 23 763 786 763 786 0.96

8 14 0.19 30 6.9 1.3 1 23 857 880 857 880 0.96

9 14 1.9 2.9e+02 3.8 2.5 1 21 1022 1042 1022 1043 0.93

10 14 0.011 1.7 10.9 8.4 1 23 1062 1084 1062 1084 0.98

11 14 0.00088 0.13 14.3 1.4 1 23 1089 1111 1089 1111 0.96

12 14 0.0019 0.28 13.3 7.8 1 23 1117 1140 1117 1140 0.96

13 14 0.00095 0.14 14.2 0.5 2 22 1146 1168 1145 1169 0.87

14 14 0.19 29 7.0 3.3 1 19 1175 1193 1175 1198 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.0017	0.25	13.4	1.0	1	23	120	142	120	142	0.98
2	14	1.8	2.8e+02	3.9	2.4	1	23	148	171	148	171	0.93
3	14	1.2e-05	0.0018	20.2	1.2	2	23	382	403	381	403	0.97
4	14	6.8	1e+03	2.1	4.3	1	23	409	432	409	432	0.93
5	14	0.021	3.2	10.0	1.6	1	23	454	477	454	477	0.98
6	14	0.0001	0.016	17.2	2.3	2	23	736	757	735	757	0.96
7	14	0.23	35	6.7	3.1	1	23	763	786	763	786	0.96
8	14	0.19	30	6.9	1.3	1	23	857	880	857	880	0.96
9	14	1.9	2.9e+02	3.8	2.5	1	21	1022	1042	1022	1043	0.93
10	14	0.011	1.7	10.9	8.4	1	23	1062	1084	1062	1084	0.98
11	14	0.00088	0.13	14.3	1.4	1	23	1089	1111	1089	1111	0.96
12	14	0.0019	0.28	13.3	7.8	1	23	1117	1140	1117	1140	0.96
13	14	0.00095	0.14	14.2	0.5	2	22	1146	1168	1145	1169	0.87
14	14	0.19	29	7.0	3.3	1	19	1175	1193	1175	1198	0.89

Sequence Information

Coding Sequence: atggcggaaaaaaaatttgttcaggATTACACAATGGTGTGTCGGACATGTCTGCAATCAGAAGTGGAAATGCTTAGCTTAAGCGAGCCTATTAATGACCATATTAAAAAGGAAACTTCACCAATTTCTTATATGGAGTGTTTAAAAGCTTGCATGAATATCGAAGAGACGACAGACATTGAAATGCCCCAAAGAATTTGCTTAGAATGTGCATCCGCTTTGCAAATCTCCTAttggtttataaaaaatgctAGCAAAGCCCAGGAATTGCTGAAAGCTAAATTAAGGGAAATAAGGcggaaaaagcaaaaaattgaaATAGAGgCTGCagctgaagaaaataaaaaaacgaaaagataCCGTTGCAAAATTTGCAATGTAAAGGTGGAAACAAAAAGATCTCTCAAGGATCATGTCAAACTACATTTGGATATTATTGTCTATAATTGTCAAATGTGCCAATACGAAAGTAATAATCGTAATTGCTTAAGTGATCATTACATACAAATTCATGGTGTGGAAGCTACCAAGGAACAgctaaaaccaaaaacaaagcTGTCACCTACTTCAGTATCATCTGCATCCACCGTTACAGCTTATGAATGTATGGATGGAGCCATAAAAAACGAACTTTTTCAAATATTGCCCGAAGAACTACAACAAATGTCTTATGATGGATTTGATCAATCGATCATTGAAACCAACTCCCCATGTAGCACAGAAAACCTGCAAGAAGCCACAGCAATGACAACAGCAAACCCAGATTACACAACAATATCTGCACCTTTTAATGCTTTGGATGTAGATCTAAATAATGATCTTGACATCGCTAACGAATTTATGGTTATGGCCGACGGTACCTTAGAAAAAGTCATGAACAAAGGCGTTGTCATAGAGTATATAGATGATCACACAAATGATATAAAATTGGAAGATGATctagttttagaaaatataatacaGGTAGAAAATGTAGATAATACCGTCATGCTAGAACCACAAAATGACATTGCCCAAATGGACGTCGATGATTTGATTATTGAGGATCGAGGCGATGTTATGGAACATACACAAGCACCTATTTTACTTCCTCTTGATGAAGAAACTATACCAGTCTCTATTATTGAACAGCCTAAAAAAGTTATGTGTAAAATTTGTACCAAAGATTTTTTTACGCAAgagcaattaaaaaatcacatgTTAACACACAatgAAATTCCCCACTTTTTTTGTGATCaatgtaaattttatacattCTTTAAGATTGACCTACaacagcactataaaagtaaacacAATCTACTCCCGACGAACAAGCAATTGCAACCAAAAAACAAGCAGAAAACTATGAATGAGTTCTATACATGCGATTTGTGTTTTTATGAAGCCAATGTAAAGTCCGATCTAAAAACGCATTATAAAACTAAACACAATATTGAGACCAACGAAATACATTTGAAACCGACTAAGGTAGGCACATCTAGATCGATTTTGCCTCCGCTATCTGCTAAGGCAAAAGCTGCAGCAATCGTAACTAAACTAACAACAGCAGGAAcctcacaaaatataaaatttaaagctaTTGAACGGCCAACACCTGACTATCCTAATGGATTGCATTGCCGTAAATGTCATGAAATATTCTTTTGGCGTAAGAAACTTTATGAACATTATAAGATGCACAATGCTGAAGAAGCTGCTCTCAAACAACAGAAAcaacttataaaaatacaaaataagacTACTTCAAATTCTTATCAACACAAGACCAATGCCATCAAAACGCCGCAAACAACTCACACAACAAAAGTCGCACATAATCAATTGGAAATATCAAACACACCAACTTACCCCAGTTTATGTACGTTAGCCCTAAGTATCTCTTCGCCAAACAATAACACACTTAATTCAGTAGCTCCGCTGACACCATCGTCTAGCTCAACATACACCTTGCCCTCGGATGCAATACCGCAGATTGTTGAAACCGATCAAAACATAGAGAACGATATGGATTTTGATTTCCATTGCGATGATGACGCCTTGTTCGGAGATTTTGAGGACGATGTTGATGTAGAAAATGATTCCGATGATAATGATTCCGAATTTCGTAATATTTTGCTTACGTCCGATGACGATTTCGAAGACATGTTACAGGatcaaaataatgtaaataatccTTCTGCCGAGGCGGCCACAACTGAATCGTATTGTGCTCATTGCCAAAAGTCTTTCATAAGCCAATATCAGTTTGAAAATCACATGTTTGTTCACAGAGGGCTGGCTCCCTATCGTTGCGAATTGTGTACCAATCTGTACAATACTAAGCGTTGTTTAATACGTCACTATAAAGCAGTACATAAAAATGTACCTACCCGAGATATGATTCAAGCTAAAGGCGATAAAGtTTGTGACGATAAAACTCCTATGGAGCATATAAAATTGGAAGCGTCAACTTgttttatgtGTGCAAAATGTCCCTATGAATCTTCAGAATTAAATGATATTAAATTCCATTTAAAGTCTACTCACAGCATAGACGATGattctTATATAATGAAaaaACTTCCTTTTGAATGCCCGCGCTGCATACGGTCGttcaaaagtaaattgaaaatttcgaGACATTTAGAACGGAATCATAGTTCGACACCAATTAATCAACATCAAGTACAATTCGATGGTGCAGAGAAGACATCGGCAATATCAACAAATACGTCAGTAACATCAATCTCGACAACAACAAATAATCACGAAAATATGATAAAATCAGAAACTAGTGAAACAAATGCAAGTAGCGCAtacaatgaaatatttattaaagaaagtaatcaacaccaaCACACATGTCCAGCATCAACAAGAAAGAGAAGCTTATTTATAAATGCCGAAGCACCCAATAATACTATAATAACTCCTTTCGATGAATTCGCCACACATCAGAATTATAATGAAATCTCTACCAATAGCAACAATTCCTCTCTTCCCAACATGCACACATTTTTTACTCAAGCGATGGCCCCAACTACTGTAGACGAGAATGACATCAATATTAATCAACCTTtatttaagtgtaaaatatgccTTTTAACCTGTTATAATCTTGCAACATTTAATGAACATAGTAAACGTATTGCATGTCGTACCATTGGTAATATTGTCAGTAGTCTTGGCgataaattactttttgaatGTGAAATATGTCACTGCAACTATAAGACTATGTACTTATTAAAACATCATCTAAGACGTCACATAGGTAGAAAGTTTTTCTGCGCGATTTGCCCCAAAACGTTTATAAACCATATCGAATTGGAGGCCCACAAACATGTGCACAATGGAGAGAGACCACACAAATGTGATGTGTGCACGAAATCATTTCGCTATGTGCATCATTTAAAGCGTCACAAGGACACCGTGCACTTTGGCAAACGTCACGACTGCACCGAACCGAACTGTGGTCGTAAATTTACAACACTGGCTCAATTAAAGGCACACATATGGACTCACAATGGTATTGTTCCCTATCAGTGTCCATTTTGTAatcgtttatttaaaaagagatTGCTtcTGCGTGAGCATtgtttaaaaatccataaatttaTTCTAAGTGAGGAGGAAGTAGCTGAAATATTTCGCAATAATTTGGGCTATACGAATCCTCATGATTTTACCGTAACTATTGGCAATGGAAAAATGTTACGACGTGGTGATTTGGAAACAATGGGTGCTTCTGGCATAATCaaatctttatttaattaa
Protein Sequence: MAEKKFVQDYTMVCRTCLQSEVEMLSLSEPINDHIKKETSPISYMECLKACMNIEETTDIEMPQRICLECASALQISYWFIKNASKAQELLKAKLREIRRKKQKIEIEAAAEENKKTKRYRCKICNVKVETKRSLKDHVKLHLDIIVYNCQMCQYESNNRNCLSDHYIQIHGVEATKEQLKPKTKLSPTSVSSASTVTAYECMDGAIKNELFQILPEELQQMSYDGFDQSIIETNSPCSTENLQEATAMTTANPDYTTISAPFNALDVDLNNDLDIANEFMVMADGTLEKVMNKGVVIEYIDDHTNDIKLEDDLVLENIIQVENVDNTVMLEPQNDIAQMDVDDLIIEDRGDVMEHTQAPILLPLDEETIPVSIIEQPKKVMCKICTKDFFTQEQLKNHMLTHNEIPHFFCDQCKFYTFFKIDLQQHYKSKHNLLPTNKQLQPKNKQKTMNEFYTCDLCFYEANVKSDLKTHYKTKHNIETNEIHLKPTKVGTSRSILPPLSAKAKAAAIVTKLTTAGTSQNIKFKAIERPTPDYPNGLHCRKCHEIFFWRKKLYEHYKMHNAEEAALKQQKQLIKIQNKTTSNSYQHKTNAIKTPQTTHTTKVAHNQLEISNTPTYPSLCTLALSISSPNNNTLNSVAPLTPSSSSTYTLPSDAIPQIVETDQNIENDMDFDFHCDDDALFGDFEDDVDVENDSDDNDSEFRNILLTSDDDFEDMLQDQNNVNNPSAEAATTESYCAHCQKSFISQYQFENHMFVHRGLAPYRCELCTNLYNTKRCLIRHYKAVHKNVPTRDMIQAKGDKVCDDKTPMEHIKLEASTCFMCAKCPYESSELNDIKFHLKSTHSIDDDSYIMKKLPFECPRCIRSFKSKLKISRHLERNHSSTPINQHQVQFDGAEKTSAISTNTSVTSISTTTNNHENMIKSETSETNASSAYNEIFIKESNQHQHTCPASTRKRSLFINAEAPNNTIITPFDEFATHQNYNEISTNSNNSSLPNMHTFFTQAMAPTTVDENDININQPLFKCKICLLTCYNLATFNEHSKRIACRTIGNIVSSLGDKLLFECEICHCNYKTMYLLKHHLRRHIGRKFFCAICPKTFINHIELEAHKHVHNGERPHKCDVCTKSFRYVHHLKRHKDTVHFGKRHDCTEPNCGRKFTTLAQLKAHIWTHNGIVPYQCPFCNRLFKKRLLLREHCLKIHKFILSEEEVAEIFRNNLGYTNPHDFTVTIGNGKMLRRGDLETMGASGIIKSLFN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -