Pobe033443.3
Basic Information
- Insect
- Phasia obesa
- Gene Symbol
- -
- Assembly
- GCA_949628195.1
- Location
- OX451218.1:17983830-17991140[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 8 0.039 5.9 9.1 0.3 1 22 1128 1149 1128 1152 0.90 2 8 0.0033 0.49 12.5 1.5 1 23 1685 1708 1685 1708 0.97 3 8 6.4e-05 0.0097 17.9 5.4 3 23 1737 1757 1736 1757 0.98 4 8 0.002 0.31 13.2 3.0 1 23 1763 1785 1763 1785 0.96 5 8 2.8e-05 0.0042 19.0 1.2 1 23 1791 1813 1791 1813 0.98 6 8 0.03 4.5 9.5 3.2 1 23 1819 1841 1819 1841 0.98 7 8 0.013 1.9 10.7 0.1 2 23 1848 1869 1847 1869 0.96 8 8 0.0016 0.25 13.5 3.1 1 23 1875 1897 1875 1898 0.96
Sequence Information
- Coding Sequence
- ATGTTTAAACGTAAGTACAATCACGATTATTATGGCAATGAGTGTTTACCAGAAGCTAAGCAACAGCTTCAAATACCAGATCATTTCAAATGTGGTGAGGTTTACACTTGGCTGTGTGCTGGCGAATTATATGCGATTGAATGTAAATTATGTGAAGATCATCCTTTGTGTCCTTTGTCGGAATTTTCCGAACATATGGATATTTGGCACACAAATTGGGAGGAGACAACCCCTCAAAAATATGAGGATGATCATGGAAATTTACAACATGCACATGATGATGATCATGATCATGATGATAATCATGCTTTGTTATTTAACAATGAAGACAGTGGCCTGTTTGAACCAGACcaacaattacaaaacaaaagaacaacaaaccatgaagaaaattatgttcaaagcaATGAAGAAATATTAGAACCTTTTGAACAGGTACTAATAGAACAAGACTTTACtatcaccaccaccaccaccacagAGTCGTCTTCTGTACAGGTGAGCGAAGATGTTAATgaagaagaatattttaaagatcAATGTCAAACTGCAAACAAATACAAACAAGAACGACCTTTGGATGTAAATCAAACGTACAAATCCACAACAAATAAGCCGAGTGTTTGCTCAAATGAAATAACAGAAAATGACAGAGAATTACACAACATAAGAGAAGTTCTAGATTTAAGAGAATCACATGATAGAAATAAAgagttaaatgtaaataaaacaaaagagttCAAAcaggaaaataataaagaaacatTCAAGGAAGATGGCAATTTTaaaagtcatttaaaaaatagaaaagaatttaatgaaaatataccAGAAACAAGTGGCATTGAAACAACAGATGATGAAAACTTAGAATCAAAAGTAGATTTAAAAATGACAAGCAaaagaaccaaaaatttaacaaaaatgaggaaaatcaaacaaaaagcaaataataacataaaatccATAAGAACTTTACTCGAAATCGGTGATACTGTGCAGAAaggaaaaaataaaatagaaaaaagtgaaGGTGAAAAAGAAACTAGTGAAACTGAAAAAGAAATAAGTGAAATCTGTAAAatggaaattacaaaaaataaaattgaaattttaaataaaaataatcaaaaaattttacaacaaattgaaaattctgtcaatataaaagaaaataaaacaattaaattagaaacaagtggaaacgaaacaaaaattaaaattgaaaatcacACTAATAAAACGGTATTAAGTAATAGAGAAGGTAACATGGCCAGGAAAGCTTCTGAAAGTATAAGAAAATCAAAAGACATTCAAATAGAAACAAATGAACATGAAACTAAtgcaagaaaaattgaaaatgaaataaataaagagaTGGCAAACTTAAAGGAAAGAACACCAGATattgaaaaatcttttaaaTCTGAAAGTGAAACAGAGAACTCAGAACTGagtgaaaatgaaaaagaacttaataaaaataaaattaatatacgtaaaaacgaTAGGAAACAAtctgaaagtaataaaaaacgcACTGAAATGGACCCAAATCTTACTGAAAGTGAAGCTAGTTATTCTGAAATAGACTTGAGAGCTGACCTAGTATATCCAGAATTTCCACAATATCTAAGAAAAACAAGAAACTCTTTGGGAAATTTTCGGAATCCACCGGAATTACGggaaacaaatgaaaaagaaacattttactCCAACACGTTTAATGTAAATCAGAGAAAACTTACTAAGAACCCAATTAGAGTAAGAGAAACAGAACAAATGGAACTGAAACAGCAAGAACATTGTGAaaattatgatgaagatttcaAAATCGTGGAAATATACAAAACATTGGGAGTAacgaacaaaattaaacaaaaaaggtgCAAAAGTAAGGCAATCGAGGGGAGTCTTAGAGAAAATCGAAAAGAGTTAAGCGAAGAGATGCTGgaggaaaatcaatttttaaattatcattgTAAGACAAGACTCAGAAACTATGGAAGAGATAGAGAAGAAATAGCTCTGCAATCTTCAAAATCTTTTAATCAACGGATAGATGAAACCGGGGAGAGGAAGGCAAGCCAAAatgctttgaaaataaatgaaCTTTCCTTCAAAAACTACGTTAAACCCTCTAAGAGAACGAAAAGAAAAAGTGTCTGCGAAGCTAACGAtccaaacaaacaaatttctgaCAGTTCAGAATTTCTGCAAGAACCAGGCGGCAATTCTGCAATTGACCCTCTTTCAACTGTCAACATAATGAGAAGAAAAAGTCTATACGAGTCAGAGAAAGAAGAGAGAGAAGACACTTCATTAGATGCACTCATAAGAGGAAACAGCAATCCTAATTTAGCCAACTTAAATACCTCTACAGATTCTAAAGCCTATAAAAACATATCTGCTGTTATAACAGTCATGGAAAATTTGGAAAGAAATAGCAACGCAAcgagaaaagaacaaaattctCTTTTAAATCCAGACTCTCAAATGGAGAGCAATGCAAAAAATGCAAAGCAAACTTTAGAGAACCAATTTTTTGAAAGTGAAGAGGTCAACGATGAGGAAACTTTGAAAAGTTCcgaaatttttaagaaactaGATTGTAATTCAAATAATTCTTCAATTTCCTCGAATTCAAGGCAAGGCAGTTTCACAACTCCCACCACGGAACCTTTATCCCCTCTTTCACCCAAAACCGAAGAAgaacattttgaattttatgaaCCCCAAGAGAACCCAAAACTAAACAAGCAACATATTAGCCATTTAATTAAACTCTACCAGGAACATCCCCATTTATGGGATCAATCACATCCAGAATTCTGTGAACCACAAGTCTGTCGCAAATCTTGGCAGCAAATCACCGATCAATGGAATGAATTCTGCAAACGGAAATTTACCATAGCTGAAGTACGAATACGTATTTGTACACTCTGCCAACGTTTCGTTCAGGAAAGAGAACGTTTATTGTTAGAAGGCGAACTAGATGAGTGTGCCAAATTTCCCCACTACGAGCAAATGCAATTTTTGGAACAGCAAAAGTCCTTACAACAGAGACGTGAACTTTATGagcaacaaaatgaaaaactattggaaatttatcaaaattttcccATACTCTGGCATGTCGGCTGTTATAGGCTGAGACAGGCCAAAGAGAGAGCCCAAGCCTTTGAGAGCATAAGCCTGACTTTAAAATTATGTGGTATACATTTGTCCTGTTTGGCTGTTCAAAAACGGATACGTTCTCTAAGGAAATGTTATCGTTTGGAGAAAATACGCTATTTGCATGCTCAGGTAGAGCAAATGTCCTTTAACTCGGACTTTCGACATTACCAGAGtatgaaatttttggaaaaacataTGGATCCGTTTGTTTGCCGTAGTTgtggaaaaattttcgaaaatttgcaAGGTTATCGAGAGCATTTGGAGTCCGAAAATCATGGCAGAGTGTTGTCAGAGGAGAGTGAAACTGAAAATGATTTGGATACAGAGGCTGAAGAGGACAATGTCAATACTATAAGCCTGGTGCTGGGCGACAGGAATGAAAATAAGCCCGAATCTATGTGTTTTTCTTCAATTAGAAATCCAATGGATAGTTTTTCGGAATCAGACAGCTCTAGGGATGTTTTACAAAGATTCACACCCTTAGCCGGTACTCCCAACCCTTCTATTGATACATTATCGAATTTCCAGCTGAATACCTTAGAAAATTCAGCTTCTTATATCCAGGAAGATATAAATTTCCCCCTTAACACCCCTAACGATCCCATCATAAATTCTTTGCGTTTAGAAGATCAACTTATGGAAGAGATTATGGAAACTGTTACCAACGATGTTAGTTTAAGCCAACAAGGCTTGGATCAATTCCTTAACTCTGttacaaattgtgaaaatttgtcTTCCGACTTTTTCGAAACGGATCTTTTTCACACCGAAAATTCTTTTGTGGTAGAACATCCTGATATCGTTACTGATCAGACCTTGAGTGTTGTTAGACCAACAGCATCAAATACAGGAACTGACACTGTTTCCCACTACACTGAAAATCCATACGTCATGGAACATTCTGATATTGTAACAGATCCAAAAATGGGCATTTTAAGTCAGGCACAGTCAAATGTGGAAAATTGTGTTCCTGACTTGGGAAACTCTTCTTTTATGAAACATCatgtaacaacaacaacaaatcctGCTATGACTAAAGTTATAGATCAGGCTTCTAAATGTTTGAGTGCTCCAATGACAGTTGAAGATAAAGAATTAAATTGGGATAAAGGAGTCCAAAAGGACACGGAAACActtttCTCACCTATTCCCCAACCTTTGGAAACTCTGAGTGCCAGCCCTAATATTTCTGACACTGAGTTATACTCCTTATCTGATATTTCCACTACACCCCTGACCGATAATTTAATACACAAATTGATagaattttatcgtaaatttccTCAACTTTGGAATCCCAATCATTTGGATTATAATTCGCGTAATTTAAGGCGTCAAGCTTGGTATTCACTTACAAACGAATTTAACTGTGCTGTAGGGAAACAACTATCCTGGCGTACCTTGCATCGCAAGTTAACAGATTTGGGCAAATACTATAAGAAATTGATAACAGAGCAGGAGAATTATGAGCAGCTAGAGAATAAATGGGCTTTTTATGATGATTTCAAGTTTATGGATGATGTGATTGACGTGCACGATGAATTACAGCGCAATGTCCATCATCGTgccaataatttcaaaattatagccCTTTACAAGACTTTACCGCAGCTGTGGAATATCAAACATCCCGATTATAATAAACGCTGCACGAAACAGCGTAATATAGAATCAATGTGCAATAGATTGCAAGAGGAAAATAATTTGCAATTGACTACAGAGCGTCTTAAAAATCGTCTCATAGAACTGAGAGCCCAATATAGAGCGGCCAAAAAGCAACGCTTAAAATGCCTTAAAAATCAGCAACAATTTGCATccaacaattttgaattttatgaaGCTCTCCAGTTTCTAGACGATCACATAGATCCCTTTATCTGTGATAACTGtaaaatggaatttaaaaaacttacagACTACAATCAACATCTTAGGAAAGTCCATTCTTCCAGGGTTGCTCCAAATAATCAAACTCTAACtttaccaccaccaccaccccCACCACATGGTTTAGTGGGAGAAAATATTTGCCACATCTGCAGCATGAAGTTTACCACACGCAGCAATTTGTTACATCATATTAGACGTCATGAGGGCATACGTAATCATGCATGTACTTGgtgttcgaaaaaattttatgccTCTCACGCTTTGAAAGTGCACATAAGATCCCATACCAAGGAATGTCCCTATACGTGCGAAAAATGTGGCATGTCTTTCGTAAGTGCCAGTAAATTAAATCTACATTTTAAACGCCATTCGAATAGAAAAGATTATCAATGTGATTTTTGTTCCAAAACCTTCTATACGGCCTTCGAAAAGGATCGCCATGAAAAGCGTCACTTAAATATACGTGACAAGACCTGTGCTATCTGTGGCAAAACTTTTGTTGCCGGTTCATCGTACTATGCTCACTTGATGTTGCACAGTGATACCAAACGTTTCGAATGTGACAAATGTGATATGAAGTTTGCACAGTATGCGGGATTGTACAAACATAAAAAGCGGCATCATACGtga
- Protein Sequence
- MFKRKYNHDYYGNECLPEAKQQLQIPDHFKCGEVYTWLCAGELYAIECKLCEDHPLCPLSEFSEHMDIWHTNWEETTPQKYEDDHGNLQHAHDDDHDHDDNHALLFNNEDSGLFEPDQQLQNKRTTNHEENYVQSNEEILEPFEQVLIEQDFTITTTTTTESSSVQVSEDVNEEEYFKDQCQTANKYKQERPLDVNQTYKSTTNKPSVCSNEITENDRELHNIREVLDLRESHDRNKELNVNKTKEFKQENNKETFKEDGNFKSHLKNRKEFNENIPETSGIETTDDENLESKVDLKMTSKRTKNLTKMRKIKQKANNNIKSIRTLLEIGDTVQKGKNKIEKSEGEKETSETEKEISEICKMEITKNKIEILNKNNQKILQQIENSVNIKENKTIKLETSGNETKIKIENHTNKTVLSNREGNMARKASESIRKSKDIQIETNEHETNARKIENEINKEMANLKERTPDIEKSFKSESETENSELSENEKELNKNKINIRKNDRKQSESNKKRTEMDPNLTESEASYSEIDLRADLVYPEFPQYLRKTRNSLGNFRNPPELRETNEKETFYSNTFNVNQRKLTKNPIRVRETEQMELKQQEHCENYDEDFKIVEIYKTLGVTNKIKQKRCKSKAIEGSLRENRKELSEEMLEENQFLNYHCKTRLRNYGRDREEIALQSSKSFNQRIDETGERKASQNALKINELSFKNYVKPSKRTKRKSVCEANDPNKQISDSSEFLQEPGGNSAIDPLSTVNIMRRKSLYESEKEEREDTSLDALIRGNSNPNLANLNTSTDSKAYKNISAVITVMENLERNSNATRKEQNSLLNPDSQMESNAKNAKQTLENQFFESEEVNDEETLKSSEIFKKLDCNSNNSSISSNSRQGSFTTPTTEPLSPLSPKTEEEHFEFYEPQENPKLNKQHISHLIKLYQEHPHLWDQSHPEFCEPQVCRKSWQQITDQWNEFCKRKFTIAEVRIRICTLCQRFVQERERLLLEGELDECAKFPHYEQMQFLEQQKSLQQRRELYEQQNEKLLEIYQNFPILWHVGCYRLRQAKERAQAFESISLTLKLCGIHLSCLAVQKRIRSLRKCYRLEKIRYLHAQVEQMSFNSDFRHYQSMKFLEKHMDPFVCRSCGKIFENLQGYREHLESENHGRVLSEESETENDLDTEAEEDNVNTISLVLGDRNENKPESMCFSSIRNPMDSFSESDSSRDVLQRFTPLAGTPNPSIDTLSNFQLNTLENSASYIQEDINFPLNTPNDPIINSLRLEDQLMEEIMETVTNDVSLSQQGLDQFLNSVTNCENLSSDFFETDLFHTENSFVVEHPDIVTDQTLSVVRPTASNTGTDTVSHYTENPYVMEHSDIVTDPKMGILSQAQSNVENCVPDLGNSSFMKHHVTTTTNPAMTKVIDQASKCLSAPMTVEDKELNWDKGVQKDTETLFSPIPQPLETLSASPNISDTELYSLSDISTTPLTDNLIHKLIEFYRKFPQLWNPNHLDYNSRNLRRQAWYSLTNEFNCAVGKQLSWRTLHRKLTDLGKYYKKLITEQENYEQLENKWAFYDDFKFMDDVIDVHDELQRNVHHRANNFKIIALYKTLPQLWNIKHPDYNKRCTKQRNIESMCNRLQEENNLQLTTERLKNRLIELRAQYRAAKKQRLKCLKNQQQFASNNFEFYEALQFLDDHIDPFICDNCKMEFKKLTDYNQHLRKVHSSRVAPNNQTLTLPPPPPPPHGLVGENICHICSMKFTTRSNLLHHIRRHEGIRNHACTWCSKKFYASHALKVHIRSHTKECPYTCEKCGMSFVSASKLNLHFKRHSNRKDYQCDFCSKTFYTAFEKDRHEKRHLNIRDKTCAICGKTFVAGSSYYAHLMLHSDTKRFECDKCDMKFAQYAGLYKHKKRHHT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -