Basic Information

Insect: Phasia obesa
Gene Symbol: -
Assembly: GCA_949628195.1
Location: OX451218.1:11544811-11547238[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 8.8e-05 0.013 17.5 2.3 1 23 441 464 441 464 0.95

2 7 0.012 1.9 10.7 2.3 2 23 470 491 469 491 0.96

3 7 0.00031 0.047 15.8 3.7 1 23 497 519 497 519 0.97

4 7 0.011 1.7 10.9 6.2 1 23 525 547 525 547 0.98

5 7 0.00052 0.079 15.0 3.4 1 23 553 575 553 575 0.98

6 7 5e-06 0.00076 21.4 0.1 3 23 583 603 581 603 0.96

7 7 2.2e-05 0.0033 19.4 5.3 1 23 609 631 609 631 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	8.8e-05	0.013	17.5	2.3	1	23	441	464	441	464	0.95
2	7	0.012	1.9	10.7	2.3	2	23	470	491	469	491	0.96
3	7	0.00031	0.047	15.8	3.7	1	23	497	519	497	519	0.97
4	7	0.011	1.7	10.9	6.2	1	23	525	547	525	547	0.98
5	7	0.00052	0.079	15.0	3.4	1	23	553	575	553	575	0.98
6	7	5e-06	0.00076	21.4	0.1	3	23	583	603	581	603	0.96
7	7	2.2e-05	0.0033	19.4	5.3	1	23	609	631	609	631	0.96

Sequence Information

Coding Sequence: atgCAAACTAAAGttcaaaatatgcaaaattacaTTGGGTATATGAAATGTGGAGAAATTTTAAGACCACCTATGGATAGTTACCAACGtccatatgttttaaaatgttttcactGCAAGGAAATATATCTGCTATTTGAAGCATTTATATTTCATATAGAAGATCATTGCAAAAATGCAAACTCAAAGATTGAAGAAATTCCCGAAGTATCTAATACCATTGTTAACGAGGAACGTATGGAGTTAGCCGATAGAATGGATGTAACACATGTAAAAGTCGAGGATAatcatttttcaatacaaaCGGAGGATCCCTTGACTGTAGTAAAACCTGAAAATATTTGTGAAGATAATGAGTTCTTTTCAGTTAAGGAAGAATTAAAGCCATTAGATGATAAGTCAACTAATTACAatgatgaaaaaaattcaacaaatgcagaggaattttataaaacttatgatataattgaaaatttggacAATACGGATGTAGAGTCTCAAAGTAGTGATGAGGAAATGGACAATAGTATAGATAGTTGTGCTTCTAGCGATGAGGataatgtttacgaaataaggATTGAAAAACAATCAAACAGTGATTTGGATTACACTAGCAAGCAGCCAGCTTTTGTTAATGAATTTCTGAAAACAAAGGCACACGTCACAGCTCTGATTGAGGCCTATAAAAATCAACCTTCTTtatggaataaaaattttccattctTAAGACACAAATTGAAACgacaaaattgtttgcaaaaaattgCGGACGAGCTAAATGAACAACACAATTTGTCAATTACGTGGAATCAAGTTGCaaatattattgtatatttaTGTCGCAAATATCGTGAAGACCTAAAAGGTAATAAGGACAGCAAAGAAGCCGAAGAAAACTATAATTCGTCATGGTTTTTTGAAGATTTAAATTTCTTGAAGCCTTTTATGGAAAATAATCCAATTGCAAAACTAGATTCACATCTGCCGGATCTCTTGCCCAATCAAATAATAGATATATTGGAAATATATAAGGGGCTACCCCACCTCTGGAATACGCAATTGATTGaacattattgtaaaaataaaatatttgctgcCAAACAAGAAATGTTGCAAgcaatagaaacaaaaataggttttaaaattacagagcagattttggaagattattTTCGCAccataaataattgttttacacGAGCTAAACGtaataaaatgaacaaaaacgaCATCGAAAATAAAAGTGAGACAAAGACTGAGGATAACACACAGGAAGACTATTATGAACACATGAttttcctatatgatcatgtcgGATCTTTTAAGTGCTCTGAATGTCAACGTTCTTTCAAGAGTCCactgtatttaaaaatacaccaAACTCAATTTCATGGATCAGAACCGCTTTCATGTTCTCtgtgtaaaaaactatttaaaacagtaaattcatttacaaatCATGCAAAACGTCACATGAAAGATCTTAATCATGAGTGCATGGAATGtggaaagaaatttttacattcGACAGAATTACGCATACACATGCGCAATCATACTGGAGCAAAACCATTTTGTTGCGAAATATGTGGAGCTTCGTTTCGACATATACAGGGTTTTAGTAATCACCATAGacgtcatataaaaaaatatctacataCTTGTCAAATTTGTAGCAAAGGTTTCTATTCTAAAGATCGTTATAATGATCATATGAATTCACATTCTAATACACGTACCCAAATATGTAATGTATGTGGTAAAGCATTTATCACCAAAAGATCACTGCAGCAACATATTGTCGTACATGATGATGTTCGAAGACATGCTTGTAAATTATGCGGCAAAACGTTTAAACACAAAACCGGTGTCAACCAACATATGAAAACGCATGGCATAGCCAACAGCGAAGAAAAAAGTACCTCCAAtaaggaataa
Protein Sequence: MQTKVQNMQNYIGYMKCGEILRPPMDSYQRPYVLKCFHCKEIYLLFEAFIFHIEDHCKNANSKIEEIPEVSNTIVNEERMELADRMDVTHVKVEDNHFSIQTEDPLTVVKPENICEDNEFFSVKEELKPLDDKSTNYNDEKNSTNAEEFYKTYDIIENLDNTDVESQSSDEEMDNSIDSCASSDEDNVYEIRIEKQSNSDLDYTSKQPAFVNEFLKTKAHVTALIEAYKNQPSLWNKNFPFLRHKLKRQNCLQKIADELNEQHNLSITWNQVANIIVYLCRKYREDLKGNKDSKEAEENYNSSWFFEDLNFLKPFMENNPIAKLDSHLPDLLPNQIIDILEIYKGLPHLWNTQLIEHYCKNKIFAAKQEMLQAIETKIGFKITEQILEDYFRTINNCFTRAKRNKMNKNDIENKSETKTEDNTQEDYYEHMIFLYDHVGSFKCSECQRSFKSPLYLKIHQTQFHGSEPLSCSLCKKLFKTVNSFTNHAKRHMKDLNHECMECGKKFLHSTELRIHMRNHTGAKPFCCEICGASFRHIQGFSNHHRRHIKKYLHTCQICSKGFYSKDRYNDHMNSHSNTRTQICNVCGKAFITKRSLQQHIVVHDDVRRHACKLCGKTFKHKTGVNQHMKTHGIANSEEKSTSNKE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -