Basic Information

Insect: Phasia obesa
Gene Symbol: -
Assembly: GCA_949628195.1
Location: OX451218.1:4144754-4145988[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.0002 0.031 16.3 7.3 1 23 153 175 153 175 0.99

2 8 8.4e-06 0.0013 20.7 1.9 1 23 180 202 180 202 0.99

3 8 0.0012 0.19 13.9 1.5 1 23 204 226 204 226 0.98

4 8 0.0001 0.016 17.3 1.7 1 23 232 256 232 256 0.97

5 8 0.0093 1.4 11.1 1.4 1 23 261 283 261 283 0.98

6 8 0.00053 0.081 15.0 1.9 1 20 289 308 289 311 0.94

7 8 8.9e-05 0.013 17.5 2.7 1 19 317 335 317 339 0.94

8 8 0.00015 0.022 16.8 0.0 1 23 345 367 345 367 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.0002	0.031	16.3	7.3	1	23	153	175	153	175	0.99
2	8	8.4e-06	0.0013	20.7	1.9	1	23	180	202	180	202	0.99
3	8	0.0012	0.19	13.9	1.5	1	23	204	226	204	226	0.98
4	8	0.0001	0.016	17.3	1.7	1	23	232	256	232	256	0.97
5	8	0.0093	1.4	11.1	1.4	1	23	261	283	261	283	0.98
6	8	0.00053	0.081	15.0	1.9	1	20	289	308	289	311	0.94
7	8	8.9e-05	0.013	17.5	2.7	1	19	317	335	317	339	0.94
8	8	0.00015	0.022	16.8	0.0	1	23	345	367	345	367	0.96

Sequence Information

Coding Sequence: atgttgaaaaattgttatttatccTCTCAAAACGATATTTTATCATCTAAAACTTGCGGAGAAATTATTTGTCAGAGTGAAACATTATTTACGATAATctgtaaattttgtaatatcaaaatttttgaatttaatgaatttgtgcaacattttcgcAATGCACACTGGACCGAAACAAATTTATTAGATGATGGTTtcaaccaaaataaaaagttccAGGTTGAAAAAGGTAATGGGAATGAATCTATTAAAACAGAGGACTATGAAGAAGAGCGCGGTTTTAGTGACGAATACAATTTAATCGAGGCTATTGATGACTACGAACATCAAGATGAATGGACGCCGTATAAGGATTATGGCCAGAGGGCAAATAATGATGAAAATAATTCAAGTGATATGGAATCATTGGCGATATTGAAGAagaaattagaaacaaacaacaaaagaaaacaaacttttaagtGTAGCTTTTGTAAACATTCGTTTACGAATAAATCTTTATATACAACTCActtacaaaaacataaaaattatcccTTTAAGTGCAACAAGTGCAGTAAAACTTTTGCTGAGGAAAATCTACTAACGCAGCATCTTAAAACCCATAGCTACCCTTGCAAACTTTGTACGAGAGTTTATCAGTCATATGATTCATTGCGCTATCACAAAGAAACCCACATTGAAACTAAGAACTTTGtatgtgattttaataattgtaacaaaacttttgtaaacaaaacTCGTCTGAACGTTCATAAACGAATTCATTCTCGCGAATCGTTTGTATGTGAAGTATGCGGTTCGCAACAACGTCATAAGCAAGCTCTAAAGGATCACATACGAAAACATACAGGTGAAAAACCATTTGCTTGTGCTTTATGTGATAGATGTTTTGCCACTAGTTCCTTGTTGATTGAGCATCAAGCCTGTCATGAAACAGAACGTAAACATGTATGTGATGTGTGTGGTAAAAGTTTTAATCGCAAAAAAGCTTTGTATCATCATAAACCTTTACatttggatataaaaaaatttttgtgtaaggTTTGTGGCGCTAGGTATGCCCAGGCCGCTGGATTATCGGCACATCTACGTAAacataaagagaataaaattacaaacatcgaaccaaattcaaaaacaaatgatttatttgatgtatttttttcttaa
Protein Sequence: MLKNCYLSSQNDILSSKTCGEIICQSETLFTIICKFCNIKIFEFNEFVQHFRNAHWTETNLLDDGFNQNKKFQVEKGNGNESIKTEDYEEERGFSDEYNLIEAIDDYEHQDEWTPYKDYGQRANNDENNSSDMESLAILKKKLETNNKRKQTFKCSFCKHSFTNKSLYTTHLQKHKNYPFKCNKCSKTFAEENLLTQHLKTHSYPCKLCTRVYQSYDSLRYHKETHIETKNFVCDFNNCNKTFVNKTRLNVHKRIHSRESFVCEVCGSQQRHKQALKDHIRKHTGEKPFACALCDRCFATSSLLIEHQACHETERKHVCDVCGKSFNRKKALYHHKPLHLDIKKFLCKVCGARYAQAAGLSAHLRKHKENKITNIEPNSKTNDLFDVFFS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -