Basic Information

Insect: Phasia obesa
Gene Symbol: -
Assembly: GCA_949628195.1
Location: OX451218.1:143347876-143368092[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 9.9e-06 0.0015 20.5 1.7 1 23 412 435 412 435 0.97

2 16 0.028 4.2 9.6 7.2 1 23 444 467 444 467 0.97

3 16 0.001 0.15 14.1 1.7 1 23 473 495 473 495 0.97

4 16 1.9e-06 0.00029 22.7 0.5 1 23 501 523 501 523 0.96

5 16 0.025 3.9 9.7 0.2 3 23 531 551 530 551 0.98

6 16 0.00012 0.018 17.1 4.0 2 23 557 579 556 579 0.94

7 16 0.035 5.3 9.3 1.0 1 23 585 607 585 607 0.98

8 16 1.8 2.7e+02 3.9 1.7 2 19 614 631 613 633 0.96

9 16 2.6e-05 0.004 19.1 1.0 1 23 824 847 824 847 0.97

10 16 0.00015 0.023 16.7 4.7 1 23 856 879 856 879 0.97

11 16 0.0018 0.28 13.3 1.5 1 23 885 907 885 907 0.97

12 16 2.8e-06 0.00042 22.2 0.4 1 23 913 935 913 935 0.96

13 16 0.0066 1 11.6 0.4 3 23 943 963 942 963 0.98

14 16 0.00012 0.018 17.1 3.8 2 23 969 991 968 991 0.94

15 16 0.035 5.3 9.3 1.0 1 23 997 1019 997 1019 0.98

16 16 0.1 15 7.8 0.6 2 22 1026 1046 1025 1049 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	9.9e-06	0.0015	20.5	1.7	1	23	412	435	412	435	0.97
2	16	0.028	4.2	9.6	7.2	1	23	444	467	444	467	0.97
3	16	0.001	0.15	14.1	1.7	1	23	473	495	473	495	0.97
4	16	1.9e-06	0.00029	22.7	0.5	1	23	501	523	501	523	0.96
5	16	0.025	3.9	9.7	0.2	3	23	531	551	530	551	0.98
6	16	0.00012	0.018	17.1	4.0	2	23	557	579	556	579	0.94
7	16	0.035	5.3	9.3	1.0	1	23	585	607	585	607	0.98
8	16	1.8	2.7e+02	3.9	1.7	2	19	614	631	613	633	0.96
9	16	2.6e-05	0.004	19.1	1.0	1	23	824	847	824	847	0.97
10	16	0.00015	0.023	16.7	4.7	1	23	856	879	856	879	0.97
11	16	0.0018	0.28	13.3	1.5	1	23	885	907	885	907	0.97
12	16	2.8e-06	0.00042	22.2	0.4	1	23	913	935	913	935	0.96
13	16	0.0066	1	11.6	0.4	3	23	943	963	942	963	0.98
14	16	0.00012	0.018	17.1	3.8	2	23	969	991	968	991	0.94
15	16	0.035	5.3	9.3	1.0	1	23	997	1019	997	1019	0.98
16	16	0.1	15	7.8	0.6	2	22	1026	1046	1025	1049	0.90

Sequence Information

Coding Sequence: ATGTTGCCTGTCGCGCGTGCAAATTTGGATCATATTTGTTGCATATGTCTTTTGGACATAAGACCAtcaatgtttacaaaaaaagtatacgacgtcaaaaaagaaaaaaatatgtccaaaatacttaaacttacgGCACATATAACGATATTAAAAAATCccattaatcaaaaatatatcaatGATTATTGTCgaaaaatatgtgaaatatGTTTCGTCAAGACTCAGTATTCCTATAGTTTTCGGGAAAAGATTATGGCTTCTACAGCATCGCTGAAAGAGCTCTTAGAAAGTGGCGATTTAGATGAACTCGATATTGAAAGATTGCAGTTTTTTTGTCGTCTTTGCCTAAATCGACAAAAAGCCAaagatgttaaatatttaaacatgacTCATTTAAACTGGTTAAAGGACTGTAGTGGAATAAGGTATACCTCGGTGGTGGACACGGAAGCATTTCGAATAAAAGAAGGCACCAATATAAATGAAATAGCACTAATTAATGATACACACTTTCCTAAGCAACTATGCCCTGAATGTTTTAAGAAACTGCAAAACGTTGAAGAGTTCCGTAAGTCATCAACGCAATCATTTGAGTATATGATTTCTGTTATGGGTGATGCAAGTTTACCAGAAGATTACTTAGTGAAACAAGGAGTGAAGCAGTTGAAAGAAACTATAATTTTGCCACCAGTAGATCCAGTGTTGATTGATACTAAATGTGCAACTTTGAAAacggaaaatattaaatatcaaaacgaACAAGAAGATTCTTGCACTGATGTTGTTCAATATCCAATCGAAGACACCTTTGGTTATTCGGAATCAATGATAAACCCACCACCTAACGATTCAAGCATAGAGAAATTAGAGTATGATACATTGGGAGAGGTTATGGAAATAATGGTCGATCTTCCACACTATTCAGATAATAGTGACGAAGACTTAAATTTAAGTGATGAGCTGGCGAATTGCAGCGACAATGCTAACAAAAGCAAAACTTTGCgaaaaaatcaacctaaaatggttaaacaatgtaatataaataaaaggaatttgAAGAGGAAAGAAGATGATAATGAATTTAAACCGAATCTAAGACAAAAGCAAAGTAAGAAGAAATTAGAAGAAAGTAAAAAACTTGCTGAAAGTGATAAAAGTTCAAACGAAGTTGATGGAGCATCGCTCGCTGCTATTGCGAACAATACTGAAGTTGTTAATTCTAAAGAAGCGTTTGATTGTGAAGTATGTTCAAAGAGCTTTGCAACAAGAAAAGCTTATCGAAGACATCAAAGAAGATTACATATACCTAATCCGAACCAAACGATGCATGAGTGTATGatatgttcaaaaaaatttaaatgtaaaagtcATTTAACTGGTCATATTAAAACGGTACACGAAAAACTAAGACCATATAAATGCGCTCATTGTCCAAAATCGTTTTCAGCAAACAGTTCTAAAAGAGTGCATGAACTTTCGCACACGGAAGAATTTCCCTTTGTATGTAAATGGTGCGGAAAAGGTTTTCGTCGATCTAGCCAATTAAAGATTCATTCAGAAATACATACATCAAATCCCGAATTACTTTGTCCTATTTGTAAAAGAAtccaaaaatctcaaaatgaCTTAGAAAATCACCTCCAAGTTCACAGCGATAAACGTTTACAGTGTCCTTTATGTGGCAAACTTTTTACAAGGAGTCATCACCTAAGAGATCATCACAACGCAGTTCACTTAAAACTGCGTCCTTTTAAATGTGAATTCTGTGAACTAGCTTTTGGAGACCGGAAAACACGACTTGTTCATCAAAAAAGCCATACCGAGGAACGTCCTATAACATGTAGCGTTTGTAAGAGTGGTTTTAAAACCGTTTTCTCACTAAGCAGGCACtgtaatataaataaaaggaattcgAAGAGCAAAGATGATAATGCACGAAAACAAACTCAGAAGAAATTAGAAGAAAGTAAACAACTTGCTGAAAGTGCTACAAATCCAAACGAAATTGATGAAGCATCGCTCGCTGCTATTGCGAACAATACTGAAGTTGACAATTCTAAAGAAACgaattcgAAGAGGAAAGAAGATGATAATGCATTAAGGCCGAATCCAATACGAAAAATAAGTCAGAAGAAATTTGtagaaagtaaaaaatgtgCTGAAAGTGCTACAAATCCAAAAGACATTAAGGAAGCATCGCTCGCTGCTATTGTGAAAAATACTGAAGTTGACAATTCTAAAGAATCGTTTGTATGCGAAtataatataaataagagACATTCGAAGAGCAAAGAAAATGATAATGAATTTAAGCCGAATCTAAGACGAAAACCAAGTCAgaagaaattagaaaaaagtgaaaaatgtgCTGAAAGTGCTAAAAGTGctaaaaatgcaaaagaaattaagGAAGCATCGCTCGCTGCTAACGAGAATAATACTGAAGTTGTCAATTCTAAAGAAACGTTTGATTGTGAAGTATgttcgaaaatatttgcaacAAGAAAAGCTTACAGAAGACATCAAAGAAGAGTACATATACCTAATCCGAACCAAACAATGCATGAGTGTCTGATAtgttcaaacaaatttaaacgtAAAAGTCATTTAACTGATCATATTAAAACGGTACATGAAAAACTAAGACCATTTAAATGCGCTCATTGCCCAAAAGCGTTTTCAGCCAAAAGTTCTAAAAGAGTGCATGAACTTTCGCACACGGGAGATTTTCCCTTTGTATGCAAATGGTGCGGCAAAGGTTTTCGTCAATCTAGCCAATTAAAGATTCATTCAGAAATACATACAACAAATCCCGAATTACTTTGTCCAATTTGTAAAAGAAgccaaaaatcacaaaatgacttagAAAATCACCTCCAAGTTCACAGCGATAAACGTTTACAGTGTCCTTTGTGTGGCAAACTTTTTACAAGGAGTCATCACCTAACAGATCATCACAACGCAGTTCACTTAAAACTGCGTCCTTTTAAATGTGAATTCTGTGAACTAGCTTTTGGAGACCGGAAAACACGACTTGTTCATCAAAAAAGCCATACCGAGGAACGTCCTATAACGTGTAGCGTTTGTAAGAGTggttttaaaaccattttttcacTAAGCAGGCACGTAAAGCAGTATGGTCACAAAACAGAGAATAATGAAGATGAAATTAAGagcaaatcaaagaaaaaaatatctgcaAAATCAATAAGTTCACATTACACTGAAAAGTTACACAGTACTTGTGAACTTTAA
Protein Sequence: MLPVARANLDHICCICLLDIRPSMFTKKVYDVKKEKNMSKILKLTAHITILKNPINQKYINDYCRKICEICFVKTQYSYSFREKIMASTASLKELLESGDLDELDIERLQFFCRLCLNRQKAKDVKYLNMTHLNWLKDCSGIRYTSVVDTEAFRIKEGTNINEIALINDTHFPKQLCPECFKKLQNVEEFRKSSTQSFEYMISVMGDASLPEDYLVKQGVKQLKETIILPPVDPVLIDTKCATLKTENIKYQNEQEDSCTDVVQYPIEDTFGYSESMINPPPNDSSIEKLEYDTLGEVMEIMVDLPHYSDNSDEDLNLSDELANCSDNANKSKTLRKNQPKMVKQCNINKRNLKRKEDDNEFKPNLRQKQSKKKLEESKKLAESDKSSNEVDGASLAAIANNTEVVNSKEAFDCEVCSKSFATRKAYRRHQRRLHIPNPNQTMHECMICSKKFKCKSHLTGHIKTVHEKLRPYKCAHCPKSFSANSSKRVHELSHTEEFPFVCKWCGKGFRRSSQLKIHSEIHTSNPELLCPICKRIQKSQNDLENHLQVHSDKRLQCPLCGKLFTRSHHLRDHHNAVHLKLRPFKCEFCELAFGDRKTRLVHQKSHTEERPITCSVCKSGFKTVFSLSRHCNINKRNSKSKDDNARKQTQKKLEESKQLAESATNPNEIDEASLAAIANNTEVDNSKETNSKRKEDDNALRPNPIRKISQKKFVESKKCAESATNPKDIKEASLAAIVKNTEVDNSKESFVCEYNINKRHSKSKENDNEFKPNLRRKPSQKKLEKSEKCAESAKSAKNAKEIKEASLAANENNTEVVNSKETFDCEVCSKIFATRKAYRRHQRRVHIPNPNQTMHECLICSNKFKRKSHLTDHIKTVHEKLRPFKCAHCPKAFSAKSSKRVHELSHTGDFPFVCKWCGKGFRQSSQLKIHSEIHTTNPELLCPICKRSQKSQNDLENHLQVHSDKRLQCPLCGKLFTRSHHLTDHHNAVHLKLRPFKCEFCELAFGDRKTRLVHQKSHTEERPITCSVCKSGFKTIFSLSRHVKQYGHKTENNEDEIKSKSKKKISAKSISSHYTEKLHSTCEL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -