Pobe037897.1
Basic Information
- Insect
- Phasia obesa
- Gene Symbol
- ZNF212
- Assembly
- GCA_949628195.1
- Location
- OX451218.1:77467168-77469497[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.24 36 6.7 2.4 2 23 113 135 112 135 0.93 2 15 2.7 4.1e+02 3.3 3.7 1 23 141 164 141 164 0.96 3 15 0.0016 0.24 13.5 0.3 2 23 217 239 216 239 0.89 4 15 0.0012 0.19 13.9 2.5 1 23 245 268 245 268 0.98 5 15 1.6e-05 0.0024 19.8 0.6 3 23 277 297 275 297 0.96 6 15 2.6e-06 0.00039 22.3 4.0 1 23 303 325 303 325 0.98 7 15 1.7e-06 0.00026 22.9 3.1 1 23 407 429 407 429 0.99 8 15 8.8 1.3e+03 1.7 3.2 2 23 509 531 509 531 0.95 9 15 0.004 0.61 12.2 0.9 1 22 537 558 537 561 0.91 10 15 1e-05 0.0015 20.4 0.8 2 23 567 588 567 588 0.97 11 15 9.2e-06 0.0014 20.5 4.1 1 23 594 617 594 617 0.95 12 15 0.0014 0.21 13.7 0.6 1 23 627 649 627 649 0.97 13 15 7.9e-05 0.012 17.6 4.4 1 23 655 677 655 677 0.98 14 15 2.4 3.7e+02 3.5 0.2 2 23 684 705 683 705 0.88 15 15 1.2e-05 0.0018 20.2 2.6 1 23 711 733 711 733 0.96
Sequence Information
- Coding Sequence
- atggctCGAAGGGACACTGGAAATAAACAACATAATCTAAATGTAATAGCAAATAGCATAAATTCATCGCCTGTAGAATCCAATTACTATTCAAGAGCCCCAAGGTATAATGTAAAAAATGAGATTATAGATTGCTTGGAAGATTCTCGTCAGACAGAAGAAACCATTGCAAATCAAAGTCCTAATATGATTTATGCGGAAAACTCGACCGAAGAAGATTGGGATTATAATGTAATGGACCTTTTGCAAGTTGAATGTAATGATGAATTTTCTGATGCGAAAGAAATGTGCGATGATATCTTTAAGCTCAAAAGAAAAGTTTATccaattgaaaacaaatgtgttatttgttataagacatTTTCTTGTCAAAGAGAGTTTGCCAAACATGCCCAACAAGTTCATCCTAACGAAAAAGCATTTAGATGTTTACACTGTCCTTcgttattttccaaatttaagtcGGTTACTGCTCATTTTAACAGAAGCCATATCGAGCCGGAAACAAGCAGGCATATTCGTTTGGAGCCTAAGAATAGATCTGGGATTCGACAGGTTGATAATAATGTAGGcgaggaaaataatattaaaacaagcAATGAAGATATTTTCTCAAACAGAAAGGGAAAAATTTACCCGGTTGAAAATAAATGTGCAATTTGTGATAAGACATTTTCCTCCCAAAGAGATATCGTACAGCACTCACAGGATGCTCATCCTAATGCAAAAGTATTCAAATGTCTTTACTGTCCAACGGTATTTTCGAAACTAAAATCCGTGACTACTCACTACAAAAGAAGTCATtccaaattaagaaaaactattatttgCGAGTATTGCAACAAGGCATTTTTTACACAGTTTTTATTAGAACGTCACAGACGCGCTCATACAGAACAGCGTCCTTTTGTCTGTCATCAGTGTGATAAGacctacaaatataaaagaaatttactaGTACATATTAAAACGCATACGAAAGATTCCAATTCCATTGCAGAAGAGCATTCTGTGGACGAGTACTGTGAGAATGAAgaacaaaatgaatttattgGAGATGAATATTGTGAAAATGAGGAACAAAATCTGTTTACTGAAAATGAGTTTTGTGAGAATGACGAACAAAACTTATTAACAGAAAACGGAGAAGAAGGAATAAATATTTCTGAACTTGCTTCAGCCAAAGGAAATTTCAGCTACTTGAATAAACTGTATCCATTTAAGTGCAATGAGTGTGATAGAGCttacaaacataaaaagaacTTAATAGCTCATCAAACAACTCACTGGCAAAACAACGAGGTAACAGAAACCATAATTTTGGATGATTCGTCGGAAAATGAGGAAGATAGCTTTGACTTTAACAATAGCACTTATTTTATAATAGATGAATTGAATACGGATTCTGAACATTTTGAGGATTTTGGCCAAGCAGAATTTGTTACAGGTGATTACACAGATGAGTATGATTACGAAGATTATGATTCAGTTCATATGCAAAACTCATCTGCTATGAAACAAAATGAATGTGGTATTTGTATGAAGGTATTTAAATGCCAGCAAGCAGTTGCCAAACATTTGCAACGTTGTCATGCTGAGATCGAATTCTTTAAATGTCCTTATTGTGACGACAATTTCTATAGCTTAGACACATTATCACAACACATTACAATAAAGAAACATCCTCAAAAAAAGAATGTTTGTGAAatgtgtcttaagtcttttgatcGCAGGAGTGATATGAGACGTCACATTAGAATCCATACTGATGAGCGTCCCTATTGCTGCGATATATGTAACAAGAAATTTACACAATCTAATCAATTAAAACGCCACAGAGAAGTAAACCACATTAATCCAAAAAAGCCGCAGCTTAAATTTCCCTGTAACCTTTGTACAAAGAGTTTCTTGTCCGACGAAACACTTAAACGTCACATAAGTATACATGAAAGACAAACAGAATATCCCTGttcaatgtgttttaaaacatttaaaactagATATGATTGGCATAGACATCAAGAAACTCATAgttcaagaaaaaatttaacatgcGAATTTTGTTTGCAATCCTTCAGCGACATACAAATTCTTAATGGTCATCTTAAAGATCATACGGGCGAACgcaaatatttatgtacagTTTGTGACAAAACTTATAAGGAGAAAAGTCATTTGGTAAATCACCGAAGGATCCATGATCCATTGgttaaatgttaa
- Protein Sequence
- MARRDTGNKQHNLNVIANSINSSPVESNYYSRAPRYNVKNEIIDCLEDSRQTEETIANQSPNMIYAENSTEEDWDYNVMDLLQVECNDEFSDAKEMCDDIFKLKRKVYPIENKCVICYKTFSCQREFAKHAQQVHPNEKAFRCLHCPSLFSKFKSVTAHFNRSHIEPETSRHIRLEPKNRSGIRQVDNNVGEENNIKTSNEDIFSNRKGKIYPVENKCAICDKTFSSQRDIVQHSQDAHPNAKVFKCLYCPTVFSKLKSVTTHYKRSHSKLRKTIICEYCNKAFFTQFLLERHRRAHTEQRPFVCHQCDKTYKYKRNLLVHIKTHTKDSNSIAEEHSVDEYCENEEQNEFIGDEYCENEEQNLFTENEFCENDEQNLLTENGEEGINISELASAKGNFSYLNKLYPFKCNECDRAYKHKKNLIAHQTTHWQNNEVTETIILDDSSENEEDSFDFNNSTYFIIDELNTDSEHFEDFGQAEFVTGDYTDEYDYEDYDSVHMQNSSAMKQNECGICMKVFKCQQAVAKHLQRCHAEIEFFKCPYCDDNFYSLDTLSQHITIKKHPQKKNVCEMCLKSFDRRSDMRRHIRIHTDERPYCCDICNKKFTQSNQLKRHREVNHINPKKPQLKFPCNLCTKSFLSDETLKRHISIHERQTEYPCSMCFKTFKTRYDWHRHQETHSSRKNLTCEFCLQSFSDIQILNGHLKDHTGERKYLCTVCDKTYKEKSHLVNHRRIHDPLVKC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -