Pobe040346.1
Basic Information
- Insect
- Phasia obesa
- Gene Symbol
- ZNF131
- Assembly
- GCA_949628195.1
- Location
- OX451218.1:143311671-143318812[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 27 0.00093 0.14 14.2 4.0 2 23 21 42 20 42 0.96 2 27 0.036 5.5 9.2 2.5 1 23 119 142 119 142 0.98 3 27 0.032 4.9 9.4 2.4 2 23 150 171 149 171 0.97 4 27 0.48 73 5.7 8.7 1 23 230 252 230 252 0.97 5 27 0.00022 0.033 16.2 2.3 1 23 329 352 329 352 0.96 6 27 0.014 2.1 10.6 1.6 1 22 359 380 359 380 0.95 7 27 0.32 48 6.3 0.6 2 23 392 414 391 414 0.94 8 27 0.0019 0.29 13.3 3.3 1 23 474 497 474 497 0.97 9 27 0.014 2.2 10.5 0.8 1 23 503 527 503 528 0.93 10 27 0.027 4.1 9.6 0.3 3 23 542 562 540 562 0.96 11 27 0.00052 0.079 15.0 2.5 1 23 568 590 568 590 0.99 12 27 8.9e-06 0.0014 20.6 4.8 1 23 596 618 596 618 0.99 13 27 0.0019 0.28 13.3 6.9 1 23 624 646 624 646 0.97 14 27 0.00093 0.14 14.2 4.0 2 23 718 739 717 739 0.96 15 27 0.0019 0.29 13.3 0.8 1 23 816 839 816 839 0.96 16 27 0.019 2.9 10.1 3.8 2 23 847 868 846 868 0.97 17 27 1 1.6e+02 4.7 7.8 2 23 931 952 930 952 0.95 18 27 0.005 0.77 11.9 2.1 1 23 1032 1055 1032 1055 0.96 19 27 0.007 1.1 11.5 1.3 1 22 1062 1083 1062 1083 0.95 20 27 0.32 49 6.3 0.2 2 23 1095 1117 1094 1117 0.94 21 27 0.00012 0.018 17.0 0.9 1 23 1181 1204 1181 1204 0.96 22 27 0.0093 1.4 11.1 0.3 1 23 1210 1232 1210 1232 0.98 23 27 0.25 39 6.6 0.0 2 23 1241 1262 1241 1262 0.97 24 27 0.055 8.3 8.7 3.6 1 23 1268 1290 1268 1290 0.99 25 27 3.5e-06 0.00054 21.9 3.8 1 23 1296 1318 1296 1318 0.99 26 27 4.1e-05 0.0062 18.5 5.7 1 23 1324 1346 1324 1346 0.98 27 27 0.3 46 6.3 1.4 1 22 1352 1373 1352 1376 0.89
Sequence Information
- Coding Sequence
- atgaaagatCAGACATTTGGGAGTCGTATATACAGCAAGCCAACTGCTTGGGGCCTCGTGGAATGTAAATTGTGTAATACAACGTTCAAAACTTGTAAACAACTTCGTCAGCACTTAGAAAACCACAGTGATATAGAAACACTTTACAGCTTAGAGTTAACCGATAACATTGTCCAGTATTTCTTTCCGAATATGATcgatttgaatttaattaaggACAATATTATCAAAGATATTCGTAAGAAACAGTGGTTCAAATATTACACAGTGTTAAACGAGTACTCCTACGAAATGTGTATTAGTGACACAGAAGAAGAGGATTTGGAAGAAGAATTTACTGAGCGAGCCAACAATTATAAGTGTGCTTTCTGTGCTAAACAGTTTTCGTATAAGTTCCAAGTTTACTCACATTTAAAAAAGGCTCATAGGAAGAaagaaattcctttaaaatGTAGTCATTGCAAATTggaatttatttctattaaaatgtaCAATCAGCACGTACAAACCCATTGCCATAATCAGCATAAGGTCTTACAATGTGGAAATTGTCCGGGAAAGTTCGTTTGgcctgaaaatattaaaaatcacacTTGTACCACGAAATTGTCAGCCCCCTTGCCGCCGCCTCCtcaaacaaaaaaggaaagcaAAGAGCATTTGCAGCCATTATCGACAACTGCTATTTTTCGATGTTGCCTTTGTGAGCATTCTTTTCAAAAACTACAACATTTGCGCCAACATATGACTCTGCATGCCGATGGCAAAACTGGCATTGACTTTGAGGGCTGCATTTATgttaaacaatttgaaaattcgAAAACAATTGATTATGAAATGTTCCAGCAACAGATTAAAAATTACTATAGTAAATGTCAAATAGGTCGTTTTTACCAAGCCATGGATAAGTATGGCAATGAAATGGACATTTCGGATTCAGATTCGGATAGTTGTAAAGAGGAATTTGAGAACGTAGAAAAAGAATACAAGTGCgaagtttgcaaaaaaatatataaaaatctaaaatatctacTGAAGCATCAACAGGAACGGCACAGTAATGTGAATATGCCCTTCACTTGCAAAGACTGCAAGCAGCAATATGTTAGTATTCATTTGTtacaacaacatttaaaaagGGAGTGCCCGAATGGAAACCGACAGACAGCACAACAATGCGAATTTTGTAATGTTCGTTTTATATGGCCCCATAATTTAATAACACACAAGGAAATAATGCATCGCATAATGATAGAACCTTCCTCCAGCATTTCTTCATCTGGATCCTCGACTGTTACCACTGCAGCTGGGGTAACAAGCGATACAAAGACAACAGATATGATTTTAGTGTCCAAAGTTTTAGATGATACAACAACGTTAACAGTTTGCAAACAAGCTACACCAAAAACAGATAGGAAATTTGTCTGTTCGTTTTGTCGTGTATCGTTTCCTCACAAATCAACTCTGACGCTACATGTAAAGAAACGACACACGGCTAAAAAACCTTTCAAGTGCGATGATTGTGAAATGTGGTTTATACGTGCAGCTGATTTAAAATCTCACCGTCTTACACAATCTCACCATCTTACACACTCtgttatatataaaagaaacaaacatttatgtccTGTTTGCGGGGTGTTCTTGTCTGGTAATACTAGTTTATCAGAACATGTGCGAAGGCACACTGATTACAAACCCTTTAAGTGTGATATATGCGAAAGAGTATATCCATGTAAAAGTGATTTAATGAATCACCAACGCAAACACAGTAACGACCGTCCCTATAAATGCCCACATTGCGATAGATCATTTAAAGTAAACTGTAGTTTAACATCCCATATCCTAACTCACACCGGCGAACGTCCTCATCATTGCACATTTTGTAAGAAGTCATATAATAGATTGGATTATCTAAAAATACATTTGCGTAGCCATACGGGCGAGAAACcatTTAAAGTGGAAAGCTTAGACAATGATTACAACGGCAACGATAACGATAACAGAGCTATATTCAGaGGTTGTCGCCGACATGTAGCAACGATACACTTCCGTCAAATCAAAGAATctcccaaaaaaataaaaaggaacatACAAGATTGGTCATTTGGGAATCGTATATACAGCAAGCCAACTACTTGGGGCCTCGTGGAATGTAAATTGTGTAATACAACTTTTAAAACTTGTAAACAACTTCGTCAGCACTTAGAAAACCACCGTGATATAGAAACATTTCACAGCTTAGAGTTAACCGATAACATTGTCCAGTATTTCTTTCCGAATATGAGcgatttgaatttaattaaggACAACATTATCAAAGATATTCGTAAGAAACAGTGGTTCAAATATTACACAGTGTTAAACAAGTACACCTACGAAATGTCTATTAGTGACACAGAAGTAGAAGATTTGGAAGAAGAATTTACTGAGCGAGCCAACAAATATAAGTGTGCTTTCTGTGATaaaggattttcatataagtaCCTAGTTTACTCACATTTAAATGAGGCTCATAAGAGGGaagaaattcctttaaaatgcaGTCATTGCAAATTGGAATTTGTTTCTTTCAAAATGTACAATCAGCACTTACAAACTCATTGCCTTAATTTACATAAAGTGTTCCTGTGTCAAAATTGCCCGGGTAAGTTTGCTTGGcctgaaaatgttaaaaatcacACTTGTGCCACGAAATTGCCAGCGTCATTGCCGGCACCTCCTAAAAAACATGAGAAAAACCCTAAACACCAAGAGCATTTGCAGCCAATACCGGCAATTCCTATTTTGCGTTGTTGCCTTTGTGAGCATTCCTTTCAAAAACTACAACATTTGCGCCAACATATGACTCTGCATGCCGATGGCAAAACTGGCATTGACTTCAAGGGCTGTATTTACGttcaacaatttgaaaattcGAAACCAATTGATTATGAAATGCTCCAGCAACagattaaaaataactatagTAAATGTCAAATAAGTCGTTTTTACCAAGCCATGGATAAGTATGGCAATGAAATGGACATTTCGGATTCAGATTCGGATAGTTGTAAAGAGGACTTTGAGGAATTTCAAAATGTAGAAAAAGAATACAAATGCGAAGTATGCAatgatatgtataaaaatcgaaaatatcTACTAAAGCATCAGCAGGAACGGCACAACAATGTGAATATGCCCTTCACTTGCAAAGACTGCAACCAGCAATATGTCAGTATTCATTTGTtacaacaacatttaaaaagGGAGTGCTCGAATGAAAACCGACGAACAGCACAACAATGTGAATTTTGCAATGTTCGTTTTATATGGCCCAATAATTTACTAAAACACAAAGAAATAATGcatggcataataataaaaCCTTCCTCCAGCACTTCTTCATCTGGATCTTCGCTTTTGCCAAAGACTGTTACCACTGCAACTATTGTAATAAGCGATCCAATCACAACAGATATGATTCAAGTGCCCAAAGTTTCAGATGATACAACAACGTTAACAGCTTGCAAACAAGCTACATCAGAAACAGATAGGAAATTTGTATGTTCGTTTTGTCGTGTATCCTTTCCTAACAAATCAACTCTGACGCTACATATAAGGGAACGACACATGGGTAAAAAAACTTTCAAGTGCGCTGATTGTGAAATGTGGTTTATACGAGAAACTGATTTACAATCTCACCGTCTTACACACGCTGAtatatataaaaccaaaaatgtatGTCCTGTTTGCGGGGTCTACTTGTCTAATAATACTATTCTATCAAATCATGTGCGAATGCACACTGGTTACAAACCCTTCAAGTGCAATTTATGCGAAATGGCATTTCCatgtaaaagatatttaaaggGTCACCAACGCAGACACACTAACGATCGTCCCTTTAAGTGCTCACATTGcgataaatcatttaaattaaacagtACTTTAACATTGCATATCCTAACTCACACCGGTGAACGTCCTCATCAGTGCACATTTTGTAAAAAGTCATATAAAAGATCGGATTACCTAAAAATACATTTGCGTAGTCATACCGGTGATAAGCCCTTTAAATGTGACGTTTGTGAGGAATCTTTTATATGTGGAGCATATTTAAAGAGACACAGACTCTCAAAGGGACACCACGATGAATACAAatag
- Protein Sequence
- MKDQTFGSRIYSKPTAWGLVECKLCNTTFKTCKQLRQHLENHSDIETLYSLELTDNIVQYFFPNMIDLNLIKDNIIKDIRKKQWFKYYTVLNEYSYEMCISDTEEEDLEEEFTERANNYKCAFCAKQFSYKFQVYSHLKKAHRKKEIPLKCSHCKLEFISIKMYNQHVQTHCHNQHKVLQCGNCPGKFVWPENIKNHTCTTKLSAPLPPPPQTKKESKEHLQPLSTTAIFRCCLCEHSFQKLQHLRQHMTLHADGKTGIDFEGCIYVKQFENSKTIDYEMFQQQIKNYYSKCQIGRFYQAMDKYGNEMDISDSDSDSCKEEFENVEKEYKCEVCKKIYKNLKYLLKHQQERHSNVNMPFTCKDCKQQYVSIHLLQQHLKRECPNGNRQTAQQCEFCNVRFIWPHNLITHKEIMHRIMIEPSSSISSSGSSTVTTAAGVTSDTKTTDMILVSKVLDDTTTLTVCKQATPKTDRKFVCSFCRVSFPHKSTLTLHVKKRHTAKKPFKCDDCEMWFIRAADLKSHRLTQSHHLTHSVIYKRNKHLCPVCGVFLSGNTSLSEHVRRHTDYKPFKCDICERVYPCKSDLMNHQRKHSNDRPYKCPHCDRSFKVNCSLTSHILTHTGERPHHCTFCKKSYNRLDYLKIHLRSHTGEKPFKVESLDNDYNGNDNDNRAIFRGCRRHVATIHFRQIKESPKKIKRNIQDWSFGNRIYSKPTTWGLVECKLCNTTFKTCKQLRQHLENHRDIETFHSLELTDNIVQYFFPNMSDLNLIKDNIIKDIRKKQWFKYYTVLNKYTYEMSISDTEVEDLEEEFTERANKYKCAFCDKGFSYKYLVYSHLNEAHKREEIPLKCSHCKLEFVSFKMYNQHLQTHCLNLHKVFLCQNCPGKFAWPENVKNHTCATKLPASLPAPPKKHEKNPKHQEHLQPIPAIPILRCCLCEHSFQKLQHLRQHMTLHADGKTGIDFKGCIYVQQFENSKPIDYEMLQQQIKNNYSKCQISRFYQAMDKYGNEMDISDSDSDSCKEDFEEFQNVEKEYKCEVCNDMYKNRKYLLKHQQERHNNVNMPFTCKDCNQQYVSIHLLQQHLKRECSNENRRTAQQCEFCNVRFIWPNNLLKHKEIMHGIIIKPSSSTSSSGSSLLPKTVTTATIVISDPITTDMIQVPKVSDDTTTLTACKQATSETDRKFVCSFCRVSFPNKSTLTLHIRERHMGKKTFKCADCEMWFIRETDLQSHRLTHADIYKTKNVCPVCGVYLSNNTILSNHVRMHTGYKPFKCNLCEMAFPCKRYLKGHQRRHTNDRPFKCSHCDKSFKLNSTLTLHILTHTGERPHQCTFCKKSYKRSDYLKIHLRSHTGDKPFKCDVCEESFICGAYLKRHRLSKGHHDEYK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -