Pobe032931.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Phasia obesa
Gene Symbol
-
Assembly
GCA_949628195.1
Location
OX451218.1:7241256-7243843[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 15 0.00031 0.046 15.8 3.5 1 23 178 200 178 200 0.97
2 15 0.0022 0.33 13.1 1.8 1 21 206 226 206 227 0.92
3 15 0.31 47 6.3 4.5 1 21 283 303 283 304 0.95
4 15 7.2e-06 0.0011 20.9 3.0 2 23 314 336 313 336 0.97
5 15 0.0019 0.28 13.3 1.4 3 23 420 440 418 440 0.98
6 15 0.0053 0.81 11.9 3.2 1 23 446 468 446 469 0.95
7 15 0.0086 1.3 11.2 0.3 1 23 490 513 490 513 0.95
8 15 3.8e-05 0.0058 18.6 2.5 1 23 519 541 519 541 0.98
9 15 2.2e-06 0.00033 22.5 2.4 1 23 547 569 547 569 0.99
10 15 1.3e-07 2e-05 26.4 1.8 1 23 575 597 575 597 0.96
11 15 0.0084 1.3 11.2 4.1 1 23 603 625 603 625 0.97
12 15 0.001 0.15 14.1 2.2 1 23 631 653 631 653 0.96
13 15 6.7e-07 0.0001 24.1 0.4 1 23 659 681 659 681 0.99
14 15 1.6e-06 0.00024 23.0 1.7 1 23 687 709 687 709 0.99
15 15 0.0088 1.3 11.2 0.1 1 19 715 733 715 734 0.97

Sequence Information

Coding Sequence
ATGTTAATACTTGAAATATATGGTCGGGTGTGTcgagtatgtatgtgtaaatcgAGTAATCTGCATGACTTGAATGAGACAACCGAAGAGTGCATCACAATGAGTGAAATGTTGACAAAAACTGTGTCCGGCATTCAGGCCAACATCGAATTTCCAGTGCCTCAAGAAATTTGTGAATTATGCATGGAACATTTACAGATATCTTTTAGATTTCAACAACTATGTATGAGCACTAACGAACAAATGCTGAAAATTTGGGAACAGTCCCATAAGGCAGAGGTAAAGCAATCATTAACGGATGGTGTAGAGAATGAAGAAGAACCAGATCCTATTAAAGTTGAACATGATATTGAAGAAGGAGATGAACAAATAGATGATAATATGGAATTCCtggaagaatttgaaaatattgaaaatggtAATAAATGGGAAAATGCAACGGATTTTGATACACCAGATAAGGATGAACTgGCGTTGAAACACACTCTAACACCAGTTTCAAACCCATCTGGACGACTATCTGAGGGCCGGTTTTCATGCTTAGATTGTACGGAAACTTTTGCAAAACATTCGCAATTAAAACGCCATCGTGTTAAACATGAGTCTACACATCCTTTTGATTGTCGTAAATGTACAAAACGgtttaaaatcaaaagtttattacaaaaacattcgaaaatctgtaaaaaagataaaagaaaattatcaaGTGGTGAGGATGATATAGACGAGGATATGCCTCTTAGCACTCTGAAAAAAGTTGAAACAGAATATGATAGTGACGTTTCCAAGGAAAATGATAAAAAGAAACgtaaagttattaaaactgTTGACAAAAAGACTCCTTATTATTGCTCGACTTGTGATAGCTATTTTAAATACGGCTATCAACTTACTAAACACCGTTGTAGTGAGAGCGATAATGATTCACGCTTGAATAAATGCGAAAAATGCAATAAGAGGTTTACCACCAATCAATTGCTTCAAACACATATAAATACCAAGCATAAAGATGACAAAACTACAACAAAGATAGAGAAAGCCTCCACCAAAACTCTTGATAAAAGTAAGGCCACAAAAATAAGTGAAGGTGATGGCCAGAATGAAGAAATTGATATGGAGCAAGACAACGATAACGATGATAATTGGAATGACTTGAATCAGGATGATTCATCGGATGGTAGTGACTCTGATTATGTCGAAAAAGACAAAAGCACAACAAAGACAAAAGCAGAGCCAACTGCAAACCAATTTGGTTGCAATGAATGTGATGCTTCCTTTAGATTTGAAAAACAACGCGTTCGTCATATGAAAAAACACACAGAAAATCACCGCTTTGTATGTGCCTTATGTTGGGATCGTTTCAAATACCCACATATGTTGCAAAAACACATGGAAAAACATCACCCTGAAGAGAATCCCAATCCTAAAGTTGTTGAAACAAAACCAGAAATTGTAGAGAAGACACACATCTGCAGTTACTGTCCATCGGCTTATTCGAATGTTGGTGGTTTGGCCCAACATATGAGTAAAAAGCACCCAGAAATTAAACCCTTTAAATGTGACAAGTGTGAAAAGACTTTTGTAGTTGAGGAACATTTGAAAATACATACGAATCGCCACATGGGtattaaaaacttcaaatgTGATCTCTGTGATAAATccttttcttttaaatttgctATGAAACAGCATATGCGTATACATACGGGtgatttgaattatttatgCACATTATGTGGCAAGAAGTTTTATAGACCCAGTAATTTACGGCAGCATATGCAACGTCATGGAGATGATAAACCCTATACATGTCCTCACTgtccaaaacgttttaaatgTCCATCGGATCgttatatacatttgatgtcaCATCAAGAGGGTAAAAACCATGTATGTCAGACTTGTGGAGCAAGGTTTTCACGAGTGGATACTTTACACCAGCATCAAATACTTCATACGGGTGAAAAACGCTATAAATGCGATCAGTGTCCTATGGcATTCCCCCGTTTGATGAACTTAAATCGGCATTTACGCACTCATACTGGTGAAAAACCATACAAATGCAAATTTTGTGAGAAAGCTTATGCACAAAGTAATgatttaaacaaacatttacgAACTCACGTTGGTGAAAACACCTATATGTGTACCCAGTGTCCGGCCGCTTATAAATACCAGGCAGACTTAAGGAATCATGAGTGGGAACATTATCGTCTGCAAAAGGAGGCAGAACAGAAAGCTAAGGAAGAAGCATCGGCATTAAAAATGAATGAACAGACTGTTACGGAAGTAAATGtgtag
Protein Sequence
MLILEIYGRVCRVCMCKSSNLHDLNETTEECITMSEMLTKTVSGIQANIEFPVPQEICELCMEHLQISFRFQQLCMSTNEQMLKIWEQSHKAEVKQSLTDGVENEEEPDPIKVEHDIEEGDEQIDDNMEFLEEFENIENGNKWENATDFDTPDKDELALKHTLTPVSNPSGRLSEGRFSCLDCTETFAKHSQLKRHRVKHESTHPFDCRKCTKRFKIKSLLQKHSKICKKDKRKLSSGEDDIDEDMPLSTLKKVETEYDSDVSKENDKKKRKVIKTVDKKTPYYCSTCDSYFKYGYQLTKHRCSESDNDSRLNKCEKCNKRFTTNQLLQTHINTKHKDDKTTTKIEKASTKTLDKSKATKISEGDGQNEEIDMEQDNDNDDNWNDLNQDDSSDGSDSDYVEKDKSTTKTKAEPTANQFGCNECDASFRFEKQRVRHMKKHTENHRFVCALCWDRFKYPHMLQKHMEKHHPEENPNPKVVETKPEIVEKTHICSYCPSAYSNVGGLAQHMSKKHPEIKPFKCDKCEKTFVVEEHLKIHTNRHMGIKNFKCDLCDKSFSFKFAMKQHMRIHTGDLNYLCTLCGKKFYRPSNLRQHMQRHGDDKPYTCPHCPKRFKCPSDRYIHLMSHQEGKNHVCQTCGARFSRVDTLHQHQILHTGEKRYKCDQCPMAFPRLMNLNRHLRTHTGEKPYKCKFCEKAYAQSNDLNKHLRTHVGENTYMCTQCPAAYKYQADLRNHEWEHYRLQKEAEQKAKEEASALKMNEQTVTEVNV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01259363;
90% Identity
-
80% Identity
-