Basic Information

Insect: Phasia obesa
Gene Symbol: -
Assembly: GCA_949628195.1
Location: OX451218.1:143257501-143263212[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.0004 0.061 15.4 3.2 1 23 234 257 234 257 0.97

2 23 0.78 1.2e+02 5.0 5.5 1 23 263 286 263 286 0.96

3 23 0.00064 0.097 14.8 0.3 2 23 317 338 316 338 0.96

4 23 0.0092 1.4 11.1 1.9 1 23 415 438 415 438 0.95

5 23 0.07 11 8.3 0.8 2 23 446 467 445 467 0.97

6 23 0.35 53 6.1 0.4 2 21 476 495 475 496 0.93

7 23 0.0079 1.2 11.3 0.3 2 23 540 561 539 561 0.96

8 23 0.00028 0.042 15.9 2.3 1 23 640 663 640 664 0.96

9 23 0.016 2.4 10.4 1.6 1 22 670 691 670 691 0.95

10 23 6 9.1e+02 2.3 0.2 2 11 703 712 703 725 0.83

11 23 1.4 2.1e+02 4.2 0.1 2 19 814 831 813 834 0.92

12 23 0.00036 0.055 15.5 4.5 1 23 888 911 888 911 0.97

13 23 0.033 5 9.4 1.2 1 23 948 971 948 971 0.97

14 23 3.7e-05 0.0056 18.7 0.0 3 23 1021 1041 1020 1041 0.99

15 23 4.5e-06 0.00069 21.5 0.5 1 23 1047 1069 1047 1069 0.97

16 23 0.00014 0.021 16.9 2.4 1 23 1075 1097 1075 1097 0.98

17 23 0.0003 0.046 15.8 0.9 1 23 1103 1125 1103 1125 0.97

18 23 0.0041 0.62 12.2 1.2 1 20 1131 1150 1131 1155 0.92

19 23 6e-05 0.0091 18.0 1.3 3 23 1181 1201 1180 1201 0.99

20 23 0.00013 0.02 16.9 4.1 1 23 1207 1229 1207 1229 0.99

21 23 1.1e-06 0.00016 23.5 2.8 1 23 1235 1257 1235 1257 0.99

22 23 1.7e-06 0.00025 22.9 1.6 1 23 1263 1285 1263 1285 0.98

23 23 0.11 16 7.7 1.4 1 22 1291 1312 1291 1315 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.0004	0.061	15.4	3.2	1	23	234	257	234	257	0.97
2	23	0.78	1.2e+02	5.0	5.5	1	23	263	286	263	286	0.96
3	23	0.00064	0.097	14.8	0.3	2	23	317	338	316	338	0.96
4	23	0.0092	1.4	11.1	1.9	1	23	415	438	415	438	0.95
5	23	0.07	11	8.3	0.8	2	23	446	467	445	467	0.97
6	23	0.35	53	6.1	0.4	2	21	476	495	475	496	0.93
7	23	0.0079	1.2	11.3	0.3	2	23	540	561	539	561	0.96
8	23	0.00028	0.042	15.9	2.3	1	23	640	663	640	664	0.96
9	23	0.016	2.4	10.4	1.6	1	22	670	691	670	691	0.95
10	23	6	9.1e+02	2.3	0.2	2	11	703	712	703	725	0.83
11	23	1.4	2.1e+02	4.2	0.1	2	19	814	831	813	834	0.92
12	23	0.00036	0.055	15.5	4.5	1	23	888	911	888	911	0.97
13	23	0.033	5	9.4	1.2	1	23	948	971	948	971	0.97
14	23	3.7e-05	0.0056	18.7	0.0	3	23	1021	1041	1020	1041	0.99
15	23	4.5e-06	0.00069	21.5	0.5	1	23	1047	1069	1047	1069	0.97
16	23	0.00014	0.021	16.9	2.4	1	23	1075	1097	1075	1097	0.98
17	23	0.0003	0.046	15.8	0.9	1	23	1103	1125	1103	1125	0.97
18	23	0.0041	0.62	12.2	1.2	1	20	1131	1150	1131	1155	0.92
19	23	6e-05	0.0091	18.0	1.3	3	23	1181	1201	1180	1201	0.99
20	23	0.00013	0.02	16.9	4.1	1	23	1207	1229	1207	1229	0.99
21	23	1.1e-06	0.00016	23.5	2.8	1	23	1235	1257	1235	1257	0.99
22	23	1.7e-06	0.00025	22.9	1.6	1	23	1263	1285	1263	1285	0.98
23	23	0.11	16	7.7	1.4	1	22	1291	1312	1291	1315	0.89

Sequence Information

Coding Sequence: atgAGCACAACTAATAAATGTGAATGTTTAATTAATGGAGTTCAGTACAAATGTCGTATTTGCTTTGATCCAGGAACAAAAGTTTACCCCCTTGCAAATGAGTGGAGCAATTCAAAAACTTGGCGTGATTTATTATATGAAGTTGCTCAGTTGGAGACAAACGATGATGAGTTACTGCCAAAGACTGTTTGTTGCAAATGCCTGGATAAACTTAtgagttacaaaaaatttttaatccaGATTCggaatgtgaataaaaaatattttcaattgctGGCATGTAGTAATAACACTTTACCTGATGGTATTTTAACTGAATGCTTGGCAGAGCCTACAATTACTTTGCCATCCGACCATAATTTGTCTGAAATCAAGCTTGAAGACGAATTGCCTGTTTCATATGATATGGTTTTAAGTAACAACAACAGTAAAATACATAAAGACgATGCTCTTGATCCATTCAAGGAAACTTCGAATGAGGATATTAAACTATCTTGCAAAAAGATACAAGATGAGcaaagaaCTATAAATGAAGAATTGGATAAAATATCTAAAAGTGATTATTCTGACAACAAACATGATACTGGCTCCTCGTCATCTAACGACAGCGACAATGAGCTGGCCACTAGccaaacttttgaggagaaaaacttacaaaaatgtCTAGATTATGTTCCAACCGAAAAAGTCAACAATCGTTTTGTATGCCCTATTtgcaaaaaaacatttactttaCAAAGGAATTGTCGACGACATATAACAACAGTGCATTGCCAAACAACtagatttttttgtggattttgtGGTCAACATTACAGCTGTAAAGAATACTTGACGGTGCACCTTAAACGTATGCATCCAGGCAAATCATTTGActcaaatacaaaacaaatagttCTTTTATTTGGAGACCGTCTATACAGCATGCCGGCTCCTTGGCGTCTGGTGGAATGTAAACTTTGTGATACTGCATTTGTAACAACAAAAGAACTTCGTCAGCACTTGGAAAACCACAGTGATCCTAATACTCTTCACAGCTTAGAAATAAGCAGTAACATCGTTCAGCTTTGGTTTTCAAATGAgagtgatttaaatttaatcaagAAATTGATAGCTAAAGATATTCGTGACAAAAATTGGTTCAAATACTACACAGTGTTAAATGAATATTCCTATGAAATGTCGGTTAGTGATACAGATGCAGAAGATTTGGAAGACGAATCGAAACAGCGATCCAGTAAATACCATTGTGAATTGTGTGTTAAAGAGTTTTCATATAAATACCAAGTTTTTGCTCATTTAAAAGATGATCATATTGAGGAAGAAATTCCTTTGAAATGTAGCCAATGTAAACTGGAatttatatcaataaaaatgtaCGAACAACACAGACAGATCCACTgccgaaataaacaaaaagttctaACATGTGCACAATGTCCGGGAAAGTTTGTTAAATCCGAAAGTATGAAAAATCACATCTGCATCACTAAAATAACAGATGCTGAAAAtcaagtaaaatataatttaaattatgaagTTGAGGTATATTCTAAACTTCAAGAACAGCTGAAAACATGTAGTGGAGTCAAGCCCGTACCAGCGAAAGCTATAATACGATGTGGCCTGTGTGAACTATCCTTTGGAAAACTGCGAGATTTACGAAAACACATCTCTTTACATGCCGATGGCAAAACAGGcattgattttgaaaattgtatttatgtgAAGCTAATTAAAAGTTCAAAATCAATAGATTACTCTGTTTTGCAGCAACagataaaaaatgcttttattaaatgccaAATTAGTCATTTATATCAAGCCATCGATAATTACGGTAATGAGATGGACATTTCAGATTCAGATACGGATAGTTGTCCAGAGGATGCTGATGATGAAAATGTTAGAAAAGATTACAAGTGCGAACTTTGCAAAGAAATATTTAGAAGACGAAAACTTCTATTAAATCATCAACAAGAATGGCACCATGAAGTTGCAATGCCATTTACTTGCAAGGACTGCAAGCAACAATATATTAGTATACATTTATTACAACAGCATTTAAAAAGGGAATGTTGGAATGAACACCGTCGAATAGCTCCTAAATGTAATTTCTGCAATAGGCGTTTTATTTGGCCAGATATTATGTTAAGACACAAAGAAATacagCATCAATCGACTGTTGAAAATCCACTATCAAGTAAACTAATTAGTGCTAAGACAACAGATGTTAATTCAGCGACAGTTATATCAACCGAGAGTTCTATTACCGAAACTGCGAAACTAGGGCAACATTGTTTTCTCTGCCcgaaaaaaattgttggcaTGGAACAACTTAAAGATCATTTTGGTCATCATAATTTGAAAACATCCGACATCGAGACCGTTGAAAGTATAATATATTCCACATGTTggccaaatggtaaaaaaataataaaatgcaaaGCATGTggccttttatttaaaaacattgccAAGTTAAATGAACATTTTGCTTCTAAAAACCCCGACAACTTGTGTAACAATCAACATTCGCTAGCAAATTACTCGATTACTAATCAAAAAGGTTTTGAGTTACACTTAGAACTGGATTCTGAaacagaaaatgaaaatgaaaacgacATGGAATCTGAAGGCAATGAACAGTCATTATATGCTTATAACTGCTGCGTTTGCAATAGGTCGTTTAAGCGAAAATATCAAATAGCTCAACATCAACGATCTATGCACAATTATGACACGCTGGAGCTAAAATGTGAACTTTGTGTTTTTAGAACAGTCTCGcagaaagttttaGATTATCATAAGGCTACCCAGTGTTCTAACATTGAAAAGAAGTACAAATGTAATCagtgtaattttaaattcatgtgGCAAGATAATCTTGATGACCATATTTTAAGATATCATACACAAAAAAGTATTGCAGAGGCAATGATGGTTTGTGAAGAGGTACAAACTACTAATACTAATATCGAGGACATCGAAACGACAAAAATTAACAGTGATGATTTACTGGCAACTTCCGAAACATCaaaagcaaaaagtaaaattttatgtcCCATTTGTGGAGCTTCCTCTACTACTAGTTCAAACCTTGCAGTACATATAATGAGGCATAATGGTGAAAAACCATTCAAATGTAATATTTGTGATAAGGCCTTTCCACGAAAGGCCGATCTACAGGAACACAACAGCAAGCACACTGATAAACGTCcattcaaatgtaaaatttgCGAGAAATCgtttaaaagtcaaagaatattaCGTGCTCACAAGCGTTTACATACTGGAGAACGACCTTACCAGTGCACAATttgccaaaaatcatttttaaaatcgggCTATTTAAAACTACATATGCTTGGTCATTCGGGTGAAAAGCCCTATACGTGTAACATCTGTGGCAAAGGCTATATATGCGCCTCATCTCTGAGAAAACATCGTGATCTGAAAGGACATAACGAATTATGGTCGACGCCAGATCAGAATTGCAATTCAAATGATTCCCAACAAGCTGCCACAAAGAAAAACTTATGTCCAATATGTGGTGTCTGTTTGTCCAGCAGAACAAGTCTTACGTATCACATGAGAACCCATACTGGTGAGAAACCTTTTAAATGTAATCTTTGCGAAATGACCTGTACACGCAGTTACGATTTAGAAATGCACCGAAGAACACATTTTGCTGATCGTCCCTTTAAATGTAAGCTTTGCGAAAAGTCATTTAGGGATCAATATAGATTAAAAGTTCACATACGCACACATACTGGCGAACGTCCCTATCAGTGCAAtatttgtcagaaaaaatttaccaaacctTCATATTTAAAAGTACATTTGCTCAATCATACAGGCGAAAAACCCTTTAGGTGTGAGATTTGCGATCAAGCATTTATATGTGTCGCATATCTCAAAAAGCATCGTATCAAAAAAGGACATCATGCGGAAAATAAttga
Protein Sequence: MSTTNKCECLINGVQYKCRICFDPGTKVYPLANEWSNSKTWRDLLYEVAQLETNDDELLPKTVCCKCLDKLMSYKKFLIQIRNVNKKYFQLLACSNNTLPDGILTECLAEPTITLPSDHNLSEIKLEDELPVSYDMVLSNNNSKIHKDDALDPFKETSNEDIKLSCKKIQDEQRTINEELDKISKSDYSDNKHDTGSSSSNDSDNELATSQTFEEKNLQKCLDYVPTEKVNNRFVCPICKKTFTLQRNCRRHITTVHCQTTRFFCGFCGQHYSCKEYLTVHLKRMHPGKSFDSNTKQIVLLFGDRLYSMPAPWRLVECKLCDTAFVTTKELRQHLENHSDPNTLHSLEISSNIVQLWFSNESDLNLIKKLIAKDIRDKNWFKYYTVLNEYSYEMSVSDTDAEDLEDESKQRSSKYHCELCVKEFSYKYQVFAHLKDDHIEEEIPLKCSQCKLEFISIKMYEQHRQIHCRNKQKVLTCAQCPGKFVKSESMKNHICITKITDAENQVKYNLNYEVEVYSKLQEQLKTCSGVKPVPAKAIIRCGLCELSFGKLRDLRKHISLHADGKTGIDFENCIYVKLIKSSKSIDYSVLQQQIKNAFIKCQISHLYQAIDNYGNEMDISDSDTDSCPEDADDENVRKDYKCELCKEIFRRRKLLLNHQQEWHHEVAMPFTCKDCKQQYISIHLLQQHLKRECWNEHRRIAPKCNFCNRRFIWPDIMLRHKEIQHQSTVENPLSSKLISAKTTDVNSATVISTESSITETAKLGQHCFLCPKKIVGMEQLKDHFGHHNLKTSDIETVESIIYSTCWPNGKKIIKCKACGLLFKNIAKLNEHFASKNPDNLCNNQHSLANYSITNQKGFELHLELDSETENENENDMESEGNEQSLYAYNCCVCNRSFKRKYQIAQHQRSMHNYDTLELKCELCVFRTVSQKVLDYHKATQCSNIEKKYKCNQCNFKFMWQDNLDDHILRYHTQKSIAEAMMVCEEVQTTNTNIEDIETTKINSDDLLATSETSKAKSKILCPICGASSTTSSNLAVHIMRHNGEKPFKCNICDKAFPRKADLQEHNSKHTDKRPFKCKICEKSFKSQRILRAHKRLHTGERPYQCTICQKSFLKSGYLKLHMLGHSGEKPYTCNICGKGYICASSLRKHRDLKGHNELWSTPDQNCNSNDSQQAATKKNLCPICGVCLSSRTSLTYHMRTHTGEKPFKCNLCEMTCTRSYDLEMHRRTHFADRPFKCKLCEKSFRDQYRLKVHIRTHTGERPYQCNICQKKFTKPSYLKVHLLNHTGEKPFRCEICDQAFICVAYLKKHRIKKGHHAENN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -