Pobe040345.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Phasia obesa
Gene Symbol
-
Assembly
GCA_949628195.1
Location
OX451218.1:143287272-143304538[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 41 0.0057 0.87 11.8 1.0 2 23 76 98 75 98 0.94
2 41 0.00069 0.1 14.7 0.1 2 23 108 130 107 130 0.97
3 41 0.0015 0.22 13.6 4.0 1 23 136 158 136 158 0.98
4 41 0.0016 0.24 13.5 0.8 1 23 164 186 164 186 0.95
5 41 0.033 5 9.4 0.2 3 23 194 214 193 214 0.98
6 41 0.0036 0.54 12.4 0.2 2 23 220 242 219 242 0.94
7 41 0.018 2.7 10.2 3.2 1 23 248 270 248 271 0.96
8 41 0.036 5.4 9.3 2.8 1 23 333 356 333 356 0.94
9 41 0.0043 0.66 12.1 3.9 2 23 412 433 411 433 0.96
10 41 0.019 2.9 10.1 2.4 1 23 510 533 510 533 0.96
11 41 0.012 1.8 10.8 4.8 1 23 540 562 540 562 0.99
12 41 1.2 1.9e+02 4.4 6.5 1 20 624 643 624 646 0.95
13 41 0.0037 0.56 12.4 1.7 1 23 723 746 723 746 0.96
14 41 0.0033 0.51 12.5 2.2 1 22 753 774 753 774 0.95
15 41 0.47 71 5.7 0.2 2 23 786 808 785 808 0.94
16 41 0.00012 0.019 17.0 0.8 1 23 856 879 856 879 0.98
17 41 2.2e-05 0.0034 19.3 1.8 1 23 885 907 885 907 0.99
18 41 2.1e-05 0.0031 19.5 3.5 1 23 913 935 913 935 0.99
19 41 3.7e-05 0.0056 18.6 7.5 1 23 942 964 942 964 0.97
20 41 0.00064 0.097 14.8 1.1 1 21 970 990 970 991 0.94
21 41 0.0011 0.17 14.0 0.2 3 23 1022 1042 1021 1042 0.99
22 41 0.0018 0.27 13.4 0.7 1 23 1048 1070 1048 1070 0.99
23 41 7.6e-06 0.0011 20.8 2.2 1 23 1076 1098 1076 1098 0.98
24 41 6.8e-07 0.0001 24.1 1.9 1 23 1104 1126 1104 1126 0.98
25 41 0.0043 0.66 12.1 3.9 2 23 1201 1222 1200 1222 0.96
26 41 0.019 2.9 10.1 2.4 1 23 1299 1322 1299 1322 0.96
27 41 0.01 1.5 11.0 4.4 1 23 1329 1351 1329 1351 0.99
28 41 2.7 4.1e+02 3.3 5.6 2 20 1414 1432 1413 1435 0.93
29 41 0.0074 1.1 11.4 2.1 1 23 1512 1535 1512 1535 0.96
30 41 0.0033 0.51 12.5 2.2 1 22 1542 1563 1542 1563 0.95
31 41 0.51 78 5.6 0.3 2 23 1575 1597 1574 1597 0.94
32 41 0.00042 0.063 15.3 0.7 1 23 1645 1668 1645 1668 0.97
33 41 2.2e-05 0.0034 19.3 1.8 1 23 1674 1696 1674 1696 0.99
34 41 5e-05 0.0076 18.2 2.6 2 23 1703 1724 1702 1724 0.97
35 41 7e-06 0.0011 20.9 2.3 2 23 1731 1752 1730 1752 0.98
36 41 0.00069 0.1 14.7 1.4 1 21 1758 1778 1758 1779 0.94
37 41 0.0011 0.17 14.0 0.2 3 23 1810 1830 1809 1830 0.99
38 41 0.0041 0.63 12.2 0.9 1 23 1836 1858 1836 1858 0.99
39 41 5.9e-07 9e-05 24.3 2.2 1 23 1864 1886 1864 1886 0.98
40 41 6.8e-07 0.0001 24.1 1.9 1 23 1892 1914 1892 1914 0.98
41 41 0.47 71 5.7 2.0 1 22 1920 1941 1920 1944 0.89

Sequence Information

Coding Sequence
ATGGCCTTTATAGACACAACGATATCtgcaaTAGCAATTACTGGAAAAAGTACAACAAAACGAAATCGTTGCAAAAAAGTGAAACAATTTGATGAAAGTGGTGAATTAATTCGTAATCCTGTTAAACGCCccaaaaaacttaaacaacCAAAGAAAGCTGTCAAAACACCGCAGCCtgacgaagaaaaaaatactaatgaAGATGATGATGCAAAAGAAACGATTGTTTGTGATAAATGTTCGCAAACATTTCCTACTATTCACACATATCAAAGACACCAGCAAGCAGAACATTCTACCGAATCAAATGAAGAGAAGAATAAATGTCCGATATGTTCGAAAGAATTCAGAAATAGTTGGTATGTAGTGGATCACATAAAAGTCGTACACGATAAACTGAAGCCCTTTAAATGTTCACACTGTCCGAAGAGTTTTGCGTCAGCCCATTCGAAACGAATTCATGAACTTACACACACAGATAGTTTTCCCTATGCCTGCGAATTTTGTGACCGACGCTTTCGCCTATCCAGCAAGTTAAAGATTCATTCCGAAATACATACAACCAAACCCGAACTTTTATGTCCCATCTGTAAAAGAAGCCAAAAATCGCAGGAAGAGTTGGAAGTGCATGTAAAAAACCACGATGACAATCGTTTGCAATGCCCTTCGTGCGGCAATCTATTTCGAAGAAATGCTCAACTTAAAGATCATTATAATGCTGTACATTTAAAATTGCGTCCTTATaaatgtgatttttgtgaattgGGCTTTGGTGATCGAAAAACACGACGTGTGCATCAGAGAACACACCATAAGCAGGAGCTTTCTAAAACgTTTATAGTTGATAGCTTAGACAGTGATTGCAACAGCAATGATTACAGAGGTGAATTCAGctCCTCATcgtcaaatgaaagtaaaaatGGCAGTCCCTCTAGaCAACCAAGTGAACAGAACAAGGTTTCAGATGGTGACCTAATTGAAAAAACCAATAAAGGTTATCTTTGCACCATAtgcaaaaaaacatttactttaGCAAGAAATTGTCGCCGGCATGTAGATACGATACACTTCCGTCAAATCAAAGATCCTCCCAAATTTCGTGGAGAAGAATTTGACTTTGAGAACAGCTTACAACAATCCACTATATTCAAATCcaatgaaataaaaaccaaCATACAATATTGGCCGTTTGGGAGTCGTATATACAGCAAGCCAACAGCTTGGAGCCTTGTGGAATGTAAATTGtgtaatacaaatttcaaaacttgTAAACAACTTCGTCAGCACTTAGAAAACCACCGTGATATAGAAACACTTTACAGCTTAGAGTTAACCGATAACATTGTCCAGTATTTGTTTCCGAATATGATcgatttgaatttaattaaggACAATATTATCAAAGATATTCGTAAGAAACAGTGGTTCAAATATTACACAGTGGTAAACAAGTACACCTACGAAATGTCTATTAGTGATACAGAAGAAGAGGACTTGGAAGAAGAATCTCCTGAGCGAGCCAACAAATATAAGTGTGCTTTCTGTACTaaaggattttcatataagtaCCTAGTTCACTCACATTTAAATGAGGCACATAAAATGGAAGTAATTCCTTTTAAATGTAGTCAttgcaaattgaaatttgtttctattaaaaTGTACAATCAGCACTTACAAACTCATTGCCTTAATTTACATAAAGTCTTACTTTGTCAAAATTGTCCGGGTAAGTTCGTTTGgcctgaaaatattaaaaatcacacTTGTGCCACGAAATTGCCAGCGACCTTGCCGGCACCTCCTAAGGAACATGAGAAGAACCCTAAACACCAAGAGCATTTGCAGCTATTACCGGCAATTGCTATTTTTCGTTGTTGCCTTTGTGAGCATTCCTTTCAGAAACTACAACATTTGCGCCAACATATGCCTCTGCATGCCGATGGCAAAACTGGCATTGACTTCAAGGGCTGCATTTACgttaaacaatttgaaaattcgAAACCAATTGATTATGAAATGCTCCAGCAACagattaaaaataactataataaatGTCAAATAAGTCGTTTTTACCAAGCCATGGATAAGTATGGCAATGAAATGGACATTTCGGATTCAGATTCGGATATTTGTAAAGAGGAATTTCAAAATGTAGAAAAAGAATACAAATGCGAAGTATGCAATGATGTgtataaaaatcgaaaatatttactGAAGCATCAGCAGGAACGACACAGCAATGTAAATATGCCCTTCACTTGCAAAGACTGCAAGCAGCAATATGTCAGTAGTCATTTGTtacaacaacatttaaaaagGGAGTGCTCGAATGAAAACCGACGAACAGCACAACAATGTGAATTTTGTAATGTTCGTTTCATATGGCCCAATAATTTACTAAAACACAAAGAAATAATGcatggcataataatagAACCTTCCTCCAGTACTTCTGCATCTGGATCTTCGCTTTTGCCAAAGACTGTTACCACTGCAACTGTTGTAACAAGCGATATAACGACGACAGGTATGATTCAAACTACACAAAAAACGGATAGGAAATTTGTATGTTCATTTTGTCGTGTATCCTATTCTAACAACTCCACCCTGACGGTACATATAATGACACAACACAGTGATGAGAAACCTTTCAAGTGCGCTCATTGTGATATGGCGTTTAAACGTGCAAATGATTTACAATCACACCGTCTTACACACCCCGGCGAACATCTATTTAAGTGTACATTTTGCGAAAAATCATTTTCGCGACTAATTGAACTAAAAACTCACAAACGTACTCATAAGAATGACCTAATTAACCACCATTGCACAATTTGTCAAAAATCATTTAAACGACCCTTCAGTTTGAAGCGACATATGTTTACACATACTGGTGAAAAACCTTATAAGTGTGACATTTGCGGTAAAACCTTTGTATGTAGCGCATACCTGCAAAAACATCGCGAAATGGTTTGTAACGATTTATGGTCGACGCCAGTCAATGTGCCTGATTGTAAAGTCTTAGAAAATcccacaaaaaatgtaaaaaccaaAAAGTTGTGTCCTATTTGCGGGATCTACTTGTCTAAAAATACTAGTCTTACAAATCATGTGCGAACGCACACTGGTTACAAACCTTTCAAGTGTGATTTATGCGAAATGTCATTTTTACGTAGAGGTGATTTACTGGAACACCGACGCACACACACTAAAGAACGTCCCTTTGAATGCCCACATTGCGACAAATCATTTGCGAAAAAACGAAGATTAAACGATCATATCCGACTTCACACCGGTGAACGTCCTTATCAGTGCACAATTTGTAAGAAGTCTTTTAATAAATCGGATTATCTAAAAATACATATGCGTGGTCATACCGGCGAGAAACCCTTCAAATCAAGAAATTGTCGCCGGCATGTAGATACGATACACTTCCGTCAAATCAAAGATCCTCCCAAATTTCGTGGAGAAGAATTTGACTTTGAGAACAGCTTACAACAATCCACTATATTCAAATCcaatgaaataaaaaccaaCATACAATATTGGCCGTTTGGGAGTCGTATATACAGCAAGCCAACAGCTTGGAGCCTTGTGGAATGTAAATTGtgtaatacaaatttcaaaacttgTAAACAACTTCGTCAGCACTTAGAAAACCACCGTGATATAGAAACACTTTACAGCTTAGAGTTAACCGATAACATTGTCCAGTATTTGTTTCCGAATATGATcgatttgaatttaattaaggACAATATTATCAAAGATATTCGTAAGAAACAGTGGTTCAAATATTACACAGTGGTAAACAAGTACACCTACGAAATGTCTATTAGTGATACAGAAGAAGAGGACTTGGAAGAAGAATCTACTGAGCGAGCCAACAAATATAAGTGTGCTTTCTGTACTaaaggattttcatataaatacctAGTTCACTCACATTTAAATGAGGCTCATAAAATGGAAGTAATTCCTTTTAAATGTAGTCATTGccaattgaaatttgtttctattaaaaTGTACAATCAGCACTTGCAAACTCATTGCCTTAATTTACATAAAGTCTTACTTTGTCAAAATTGTCCGGGTAAGTTCGTTTGgcctgaaaatattaaaaatcacacTTGTGCCACGAAATTGACAGCGATCTTGCCGGCACCTCCTAAGGAACATGAGAAAACCCCTAAACACCAAGAGCATTTGCTGCCATTACCGGTAATTGCTATTTTGCGTTGTTGCCTTTGTGAGCATTCCTTTCAGAAACTACAACATTTACGCCAACATATGCCTCTGCATGCCGATGGCAAAACTGGCATTGACTTCAAGGGCTGCATTTACgttaaacaatttgaaaattcgAAACCAATTGATTATGAAATGCTCCAGCAACagattaaaaataactataataaatGTCAAATAAGTCGTTTTTACCAAGCCATGGATAAGTATGGTAATGAAATGGACATTTCGGATTCAGATTCGGATATTTGTAAAGAGGAATTTCAAAATGTAGAAAAAGAATACAAATGCGAAGTATGCAatgatatgtataaaaatcgaaaatatttactGAAGCATCAACAGGAACGGCACAGCAATGTGAATATGCCTTTCACTTGCAAAGACTGCAAGCAGCAATATGTCAGTAGTCATTTGTtacaacaacatttaaaaagGGAGTGCTCGAATGAAAACCGACGAACAGCAAAACAATGTGAATTTTGTAATGTTCGTTTCATATGGCCCAATAATTTACTAAAACACAAAGAAATAATGcatggcataataatagAACCTTCCTCCAGCACTTCTTCATCTGGATCTTCGCTTTTGCCAAAGACTGTTACCACTGCAGCTGGTGTAACAAGCGATACAACGACAACAGATACGACTCAAACTACACCAAAAACGGAtaggaaatttgtatgtttattttgtcGTGTATCCTATTCTAACAATTCCACCCTGACGGTACATATAATGACACAACACACTGATGAGAAACCTTTCAAATGCGCTCATTGTGATATGGCGTTTAAACGTGCAAATGATTTACAATCTCACCGTCTTACACACCCCGGCGAACATCCACTTAAGTGTACATTTTGCGAAAAATCATTTTCGCgactaattgaattaaaaactcACAAACGTACCCATAAAAATGACCTAATAAACCAGTGCACAATTTGTCAAAAATCATTTAAACGACCCTTCAGTTTGAAGCTACATATGTTTACACATACTGGTGAAAAACCGTATAAGTGTGACATTTGCGGTAAAACCTTTGTATGTAGCGCATACCTGAAAAAACATCGCGAAATGGTTTGTAACGATTTATGGTCGACGCCAGTCAATGTGCCTGATTGTAAGGTCTTAGAAAATCCcacgaaaaatgtaaaaaccaaAAAGTTGTGTCCTATTTGCGGGATCTACTTGTCTAAAAATACTAGTCTTACAAATCATGTGCGAACCCACACTGGTTACAAACCTTTCAAGTGTGATTTATGCGAAATGTCATTTTTACGTAGAGGTGATTTACTGGATCACCGACGCAAACACACTAAAGAACGTCCTTTTGAATGCCCACATTGCGATAAatcatttgcaaaaaaacaaagtttaacCAATCATATCCGACTTCACACCGGTGAACGTCCTTATCAGTGCACAATTTGTAAGAAGTCTTTTAATAAATCGGATTATCTAAAAATACATATGCGTGGTCATACCGGCGAGAAACCCTTCAAATGTAACTTTTGTGGCCAAGGTTTTATATGTGGCGCATATTTAAAGAAACATCAAATCTCAAAGGGGCACCTGGACGAAAACAAATAG
Protein Sequence
MAFIDTTISAIAITGKSTTKRNRCKKVKQFDESGELIRNPVKRPKKLKQPKKAVKTPQPDEEKNTNEDDDAKETIVCDKCSQTFPTIHTYQRHQQAEHSTESNEEKNKCPICSKEFRNSWYVVDHIKVVHDKLKPFKCSHCPKSFASAHSKRIHELTHTDSFPYACEFCDRRFRLSSKLKIHSEIHTTKPELLCPICKRSQKSQEELEVHVKNHDDNRLQCPSCGNLFRRNAQLKDHYNAVHLKLRPYKCDFCELGFGDRKTRRVHQRTHHKQELSKTFIVDSLDSDCNSNDYRGEFSSSSSNESKNGSPSRQPSEQNKVSDGDLIEKTNKGYLCTICKKTFTLARNCRRHVDTIHFRQIKDPPKFRGEEFDFENSLQQSTIFKSNEIKTNIQYWPFGSRIYSKPTAWSLVECKLCNTNFKTCKQLRQHLENHRDIETLYSLELTDNIVQYLFPNMIDLNLIKDNIIKDIRKKQWFKYYTVVNKYTYEMSISDTEEEDLEEESPERANKYKCAFCTKGFSYKYLVHSHLNEAHKMEVIPFKCSHCKLKFVSIKMYNQHLQTHCLNLHKVLLCQNCPGKFVWPENIKNHTCATKLPATLPAPPKEHEKNPKHQEHLQLLPAIAIFRCCLCEHSFQKLQHLRQHMPLHADGKTGIDFKGCIYVKQFENSKPIDYEMLQQQIKNNYNKCQISRFYQAMDKYGNEMDISDSDSDICKEEFQNVEKEYKCEVCNDVYKNRKYLLKHQQERHSNVNMPFTCKDCKQQYVSSHLLQQHLKRECSNENRRTAQQCEFCNVRFIWPNNLLKHKEIMHGIIIEPSSSTSASGSSLLPKTVTTATVVTSDITTTGMIQTTQKTDRKFVCSFCRVSYSNNSTLTVHIMTQHSDEKPFKCAHCDMAFKRANDLQSHRLTHPGEHLFKCTFCEKSFSRLIELKTHKRTHKNDLINHHCTICQKSFKRPFSLKRHMFTHTGEKPYKCDICGKTFVCSAYLQKHREMVCNDLWSTPVNVPDCKVLENPTKNVKTKKLCPICGIYLSKNTSLTNHVRTHTGYKPFKCDLCEMSFLRRGDLLEHRRTHTKERPFECPHCDKSFAKKRRLNDHIRLHTGERPYQCTICKKSFNKSDYLKIHMRGHTGEKPFKSRNCRRHVDTIHFRQIKDPPKFRGEEFDFENSLQQSTIFKSNEIKTNIQYWPFGSRIYSKPTAWSLVECKLCNTNFKTCKQLRQHLENHRDIETLYSLELTDNIVQYLFPNMIDLNLIKDNIIKDIRKKQWFKYYTVVNKYTYEMSISDTEEEDLEEESTERANKYKCAFCTKGFSYKYLVHSHLNEAHKMEVIPFKCSHCQLKFVSIKMYNQHLQTHCLNLHKVLLCQNCPGKFVWPENIKNHTCATKLTAILPAPPKEHEKTPKHQEHLLPLPVIAILRCCLCEHSFQKLQHLRQHMPLHADGKTGIDFKGCIYVKQFENSKPIDYEMLQQQIKNNYNKCQISRFYQAMDKYGNEMDISDSDSDICKEEFQNVEKEYKCEVCNDMYKNRKYLLKHQQERHSNVNMPFTCKDCKQQYVSSHLLQQHLKRECSNENRRTAKQCEFCNVRFIWPNNLLKHKEIMHGIIIEPSSSTSSSGSSLLPKTVTTAAGVTSDTTTTDTTQTTPKTDRKFVCLFCRVSYSNNSTLTVHIMTQHTDEKPFKCAHCDMAFKRANDLQSHRLTHPGEHPLKCTFCEKSFSRLIELKTHKRTHKNDLINQCTICQKSFKRPFSLKLHMFTHTGEKPYKCDICGKTFVCSAYLKKHREMVCNDLWSTPVNVPDCKVLENPTKNVKTKKLCPICGIYLSKNTSLTNHVRTHTGYKPFKCDLCEMSFLRRGDLLDHRRKHTKERPFECPHCDKSFAKKQSLTNHIRLHTGERPYQCTICKKSFNKSDYLKIHMRGHTGEKPFKCNFCGQGFICGAYLKKHQISKGHLDENK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-