Pobe031955.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Phasia obesa
Gene Symbol
Deaf1
Assembly
GCA_949628195.1
Location
OX451217.1:131970023-131977745[-]

Transcription Factor Domain

TF Family
SAND
Domain
SAND domain
PFAM
PF01342
TF Group
Other Alpha-Helix Group
Description
The DNA binding activity of two proteins has been mapped to the SAND domain. The conserved KDWK motif is necessary for DNA binding, and it appears to be important for dimerisation [1]. This region is also found in the putative transcription factor RegA from the multicellular green alga Volvox cateri. This region of RegA is known as the VARL domain [2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.1e-30 4e-26 92.1 0.3 3 76 175 248 173 248 0.97

Sequence Information

Coding Sequence
ATGGAACAGGACTCCACTGAAATGCATCTAAGCAGAATACGTGATGTCAAAGAATTGGCTGTTCTCAGTGATGAAGCGCGTGACGTTGTCAAAGAAGAAGTCGTACTGGAGAGTTCCGGCCATCAGCTGGAAACCAAAGTGCATATGGTAACATCATCAAATGAAAATAGTGGTGGCAGCGGTGGCAATGTTGTTTCCGTACCCGTATCCCTGCCAATTGGTTCAATGATTGCCGGAACAGCTTTCAATGTCATCTCACCCGATCATTTACCGCATTTTAAACAGATGCTGTGCGTCGACAACAATGGTTATATATCCAGCGGTGCGGTAGTGAGCAGTGTTGGCGGCGATCTTAAAACTATTGTCatacaacagcagcaacaaaatgaTCAGATTGGCATGAATCATGATGGCTCCGGCAGCAACAACAGTCATGACAGCACCATTACCGGTGACCAAATGATGCATGGTCCTGGCTCTGGTTGCGGTTCAGCGTCCGGTGTTAGTTGGACTGAAACGTCGCAAATGGAAATATTTCCCATACGTTGCAAGACCACAAGTGCCGAGCTGTATCGTAGTAAGCTGGGCTCAGGCGGTCGAGGTCGATGTGTTAAGTACAAAGACAAATGGTTGACGCCCAGCGAATTCGAACAGACTTGCGGTCGTGGCTCAAGTAAGGATTGGAAACGTTCAATTAAATATGGTGGCAAATCGCTGCAGTCTTTAATAGATGAAGGAACTTTGACACCACATGCCACCAATTGCAGTTGTACCGTTTGTTGTGACGATGAAGCGGCATCGGGACCCGTACGTCTTTTTACACCCTATAAACGTCGAAAGCGAAATCAAACAGATAATGATGGTGAAACTGGTGGTCCAAAACGTAAACGTAatactaacaataataataatattaacaataacaacaataacaatattatcAATCACACTGAACCACCACAACATACCACAACGGTGGTAGAtgataataatatgtttttaacgGAAGATAACATTACCTCCAAGGACGAACCGTGGCCAACACTTAACGATAGCCTCGACACATCAACAGAGCTAGTAGATCAAACACAAATATGTAATGCATACGATAGAGAAACATTTGTAGTGAATATAAACGATCCTGGGCCAATTGCATTGTTAGACAATAGTCAGACAATGAAAACATTGGAAAATGTTTATTGCACAATGGTCAAAGCCACTAATGATTTTAAACGCAttcttaccgatttaaagaaTACATATGATCGTAAAATCgaaatattacaaaaagaaCGCGATGCTGCGGTGGCAGCAATGCGCGTACAAGTGCATACAGACATTGATGATCCGAATATAGCGGGTGCGTTACATGGCAACGAAGTTATATCAGCTAAAAAGTGCGCTAACTGTAATCGTGAAGCGTTGGCAGAATGTTCATTATGCCGAAAGACTCCCTATTGTTCCGAATTTTGTCAACGAAAGGACTGGAATGCCCATCAAGTTGAGTGTACAAGAAATCCAGTCCCGGCTACAACTCAGCAAATTATGCTCCTAGTGGACGAGCAATcctaa
Protein Sequence
MEQDSTEMHLSRIRDVKELAVLSDEARDVVKEEVVLESSGHQLETKVHMVTSSNENSGGSGGNVVSVPVSLPIGSMIAGTAFNVISPDHLPHFKQMLCVDNNGYISSGAVVSSVGGDLKTIVIQQQQQNDQIGMNHDGSGSNNSHDSTITGDQMMHGPGSGCGSASGVSWTETSQMEIFPIRCKTTSAELYRSKLGSGGRGRCVKYKDKWLTPSEFEQTCGRGSSKDWKRSIKYGGKSLQSLIDEGTLTPHATNCSCTVCCDDEAASGPVRLFTPYKRRKRNQTDNDGETGGPKRKRNTNNNNNINNNNNNNIINHTEPPQHTTTVVDDNNMFLTEDNITSKDEPWPTLNDSLDTSTELVDQTQICNAYDRETFVVNINDPGPIALLDNSQTMKTLENVYCTMVKATNDFKRILTDLKNTYDRKIEILQKERDAAVAAMRVQVHTDIDDPNIAGALHGNEVISAKKCANCNREALAECSLCRKTPYCSEFCQRKDWNAHQVECTRNPVPATTQQIMLLVDEQS