Pobe041496.1
Basic Information
- Insect
- Phasia obesa
- Gene Symbol
- lov
- Assembly
- GCA_949628195.1
- Location
- OX451219.1:26924873-26946312[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.5e-19 3.4e-15 57.1 0.0 1 44 86 129 86 130 0.96
Sequence Information
- Coding Sequence
- ATGAAACAATGCATGAACAATTTTAATGGAggtttcatatatttaaaaggtATCTTCAAATGCGAGGTGTTTGGTTTAGACTCACCTTTGGGTTTATTTCCACCTGGCATAGATCCTGGTAAACTATACAATCCCCTTATGGAAATGTCCGATCCTAGAGGTATGCCAGGTGATGCGCCGCCGTTtctgaaaaagaaaatgcCTAGACCAAAAGGTCAACATTCTGCACCCAGAGGGGGACCACCCCGTTCCTGGACAAACGCCGAGCTAACAGAGGCCTTACAGCATGTGTGGAATAAAAAAATGACCACATCACAAGCTTCACGTATCTTCGGCATACCCTACAATTCCCTGTTAATGTATGTGCGTGGCAAGTATGGTAAATCTTTGAAATTGGAGCAACTGCGCAAAGATTGCATAAGTGGCCCACCCCTAGAGATGCTGCAAATGGGCATAAACTCTGGTGGAGGTAAGAACTCAGGAGAATCAAAGGAACAAAGAGAAGCCCGTAAGGAAGCCCAACGTAATGCTGCTCAACATCCGCCTAACGATATGGATTTGGGAGGTCCATTAACGGGGCCGGGACCTAGACCCTCAAGTTCTGAACCGGATTTACTGGGCGGACCTAATGCGCTTTTTAATCCTTTCAATCCTCAAGGTTTCTACCCCGATTTCCCTGGTGGATTTCCCGGTTTACCTTTAAGTATGTTGAATTTATTACCACCCTCAGAAAGACAACATGCAGCTGCGGCAGCCGCAGCCATGCATCACTCGATGGGCTTGGATGAGGACTGTAAATCTGATCGCTCAAAACAATCCTCCAATATGGATGATGAATTCTCGATGAGTCGCGAAGAACGCCGGCATTCTGATCTAATGAATAACTCTTCTACACCCTCCGTCTCATCACAGCAAAATGGTTCAGTGCAAGATTGA
- Protein Sequence
- MKQCMNNFNGGFIYLKGIFKCEVFGLDSPLGLFPPGIDPGKLYNPLMEMSDPRGMPGDAPPFLKKKMPRPKGQHSAPRGGPPRSWTNAELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRKDCISGPPLEMLQMGINSGGGKNSGESKEQREARKEAQRNAAQHPPNDMDLGGPLTGPGPRPSSSEPDLLGGPNALFNPFNPQGFYPDFPGGFPGLPLSMLNLLPPSERQHAAAAAAAMHHSMGLDEDCKSDRSKQSSNMDDEFSMSREERRHSDLMNNSSTPSVSSQQNGSVQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01162180; iTF_00370895; iTF_01174991; iTF_01231504;
- 90% Identity
- -
- 80% Identity
- -