Basic Information

Insect: Pharmacophagus antenor
Gene Symbol: -
Assembly: GCA_018245475.1
Location: DWQX01000011.1:37259-44416[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 2.4 4.4e+02 3.3 1.0 1 23 54 77 54 77 0.94

2 20 0.046 8.3 8.7 3.0 1 23 84 107 84 107 0.97

3 20 3 5.4e+02 3.0 3.8 1 23 183 205 183 205 0.97

4 20 0.0016 0.3 13.2 1.0 2 23 211 232 210 232 0.97

5 20 0.85 1.5e+02 4.7 1.0 1 23 238 260 238 261 0.94

6 20 0.11 20 7.5 4.1 2 22 511 531 510 531 0.96

7 20 0.13 24 7.2 2.0 2 23 788 809 787 809 0.97

8 20 0.014 2.6 10.3 0.8 2 23 889 910 888 910 0.97

9 20 1.1 2e+02 4.3 0.4 1 23 918 940 918 940 0.97

10 20 0.12 21 7.4 3.4 1 23 973 995 973 995 0.95

11 20 6.6e-05 0.012 17.6 4.2 1 23 1003 1025 1003 1025 0.99

12 20 0.18 32 6.8 2.7 1 23 1108 1130 1108 1130 0.99

13 20 0.34 62 5.9 1.3 1 19 1185 1203 1185 1207 0.93

14 20 3 5.5e+02 3.0 0.1 1 23 1213 1235 1213 1235 0.89

15 20 0.0043 0.78 11.9 1.8 1 23 1303 1325 1303 1325 0.95

16 20 0.014 2.5 10.3 1.1 1 23 1331 1353 1331 1353 0.96

17 20 0.0064 1.2 11.4 2.6 1 23 1442 1464 1442 1464 0.97

18 20 0.00016 0.029 16.4 1.4 1 23 1470 1492 1470 1492 0.99

19 20 1.5 2.7e+02 3.9 1.3 1 23 1584 1606 1584 1606 0.96

20 20 0.014 2.5 10.3 3.9 1 23 1617 1639 1617 1639 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	2.4	4.4e+02	3.3	1.0	1	23	54	77	54	77	0.94
2	20	0.046	8.3	8.7	3.0	1	23	84	107	84	107	0.97
3	20	3	5.4e+02	3.0	3.8	1	23	183	205	183	205	0.97
4	20	0.0016	0.3	13.2	1.0	2	23	211	232	210	232	0.97
5	20	0.85	1.5e+02	4.7	1.0	1	23	238	260	238	261	0.94
6	20	0.11	20	7.5	4.1	2	22	511	531	510	531	0.96
7	20	0.13	24	7.2	2.0	2	23	788	809	787	809	0.97
8	20	0.014	2.6	10.3	0.8	2	23	889	910	888	910	0.97
9	20	1.1	2e+02	4.3	0.4	1	23	918	940	918	940	0.97
10	20	0.12	21	7.4	3.4	1	23	973	995	973	995	0.95
11	20	6.6e-05	0.012	17.6	4.2	1	23	1003	1025	1003	1025	0.99
12	20	0.18	32	6.8	2.7	1	23	1108	1130	1108	1130	0.99
13	20	0.34	62	5.9	1.3	1	19	1185	1203	1185	1207	0.93
14	20	3	5.5e+02	3.0	0.1	1	23	1213	1235	1213	1235	0.89
15	20	0.0043	0.78	11.9	1.8	1	23	1303	1325	1303	1325	0.95
16	20	0.014	2.5	10.3	1.1	1	23	1331	1353	1331	1353	0.96
17	20	0.0064	1.2	11.4	2.6	1	23	1442	1464	1442	1464	0.97
18	20	0.00016	0.029	16.4	1.4	1	23	1470	1492	1470	1492	0.99
19	20	1.5	2.7e+02	3.9	1.3	1	23	1584	1606	1584	1606	0.96
20	20	0.014	2.5	10.3	3.9	1	23	1617	1639	1617	1639	0.98

Sequence Information

Coding Sequence: ATGCTACAACAGATGTCCTCGTCGCCGAGCGCGCACGTCGGCGAGGTTGCTACTATCTTGCGCCCCCTCGAAGGCCGCCTGTGCGGCGACGCCTCTTCTGAGGGCTCTTCAGACGCCGCCGAAGACTTAGAACTGCCACAGTGCAAGATAAGAAGGAACTATAGCTGCACCAAGTGCACGTTTTATACACAAAACCCGCGAGCTTATCTAATACACACTCGTGACGTGCATTTCGTGAGGCTTAAGATTTACGATTGCGGCTATTGTGTTTACGCCTCACGACATCATCAGAAACTTGTGAGGCACATGAAAATGGTCCACGGAGAGATTGCTGCTGAAAAGCAAACTGAGACAGAGCAACCTTCCTTTACCACGACCACACTCGAGGCGTCAGAGAAGGAGGAAGATTTAATTGAAGAAATAGAAGAATGTGATGATATGGAAGTGGATGACTGTGGTGACGAGTTAATTGAACGGTTAGATGTCGATGAAGATGCATCTGGGGCCAGCAACTTaacttgtaacaaaaaatcGAAGGGTAATTTTTACTCATGCGATAAATGCAATTACGTGACACATATAAAAGCTAGGTACACGAAGCATGTGAAATACCATTCTATGCCAATGATAAAGTGTACCATGTGTGACTTTCGTACGCCATACAAATGGAATTTGGATCGTCATATGAAAAATCATGGTGGAACGGGAAGCTTCAGCTGTTCCATATGTAACTTTACGGCCGACATCAGGCAAAGTTTGACAGTGCACGAAATGAATCATCACACGCCACCGGTGGGGCATTCGACATCGAGCCGACGTCGTAACCGTGTGGGTGCCAGCGACCTGAGTTTCCCTGAGGAGATGTTGAACGGGAGTGCGCTCGTCCCCAAGGAGGAGGAAGGGAGCGGCGACTCGCGATCCTCGCACTCGGCCTCGGAAATGGGTTTACAATATGCAGAAAGAGAAATAGTCAGTAGCAATAGTGACTCTAATGATGCTGCTAATTCCGAAACATCTCCCAAAAATGATTTAAACGACCTGCGCTCTAGCCGATACCAAGAATTAATAAGCAGATTGGAAGACTCAAAGTCCTACAAACAAAACCGTAAGATATCTAGACCAATTCCTCAGCTGATTCCACTAAATTCATCAACACCAAATCAAAACAAAAGTTCCACATGTGAGCCACccgtgaaaaaattaaaagaatcaaaTTCAAGTGATTCTCCAGATTCAAATAGTTCTATTAGATTAGATAGTGCGAAGCCTGATGTTACATCTATACAAGTACCACCCAACTGCGCTCCCAACAATACTAAAGAAACACCAgcacgtaaaaaaaatgaatcgttTTTCGATAAATTGAAAGAAAGATTACTTACTGAAACAGGAGAAGAAGGCTCCCTAAGATGTAAAAACTGCGGATTTGAAAGCAAATGCTTGTCGGAACACTCTGTTCATGAAAAAACTTGCACCCATGTTTCTAATCGGACTCCTACGAATACTGCGATGTCAAGTTTAAGTTCAACAAGATGTCAAAACTGTAGGCACAGATGTAAATCTAGTGCAGATCTTTTTGTCCATATGAAAACTTGTAAGAAAAATGAAGAAAGTGAAACTAAAGAAATCACAATAGAAACACAAGATAGCAATGAAGCTGCATTTGAGAATCCTTATAAAGAAGTGGAACCACATCCAATGGAGAACGTTGTGTTCGTTTGGAACAATATAAACAGAGAGTCAAGTAAATTCGATACACCACTTGATATTAGCATCAACGACGATTCAACACTTCCAGAACCACCTCAAAGTTTTGATTCCGAAATTGTTGACGAAAATGACGGCATGAACTTATCACCGAGTCAAGCTATTGGAAAGAAAGTGTTTAAGTGCCCACATTGTTTGTTTTGGGCTACCACTGCGTCTAGATTCCACGTTCATATTGTAGGACATCTAAACAAAAAACCATTCGAATGTTCCTTGTGCAAATATAAATCTAATTGGAGATGGGATATAACGAAGCACATTAAACTGAAATCTGCAAGGGATCCTGATCATACTGATGCAAAAGTATTAATGACAGATGAAACTGGACGAAGGAACTatagtaaatacaataaattcttGGCAATGCCGATTTTGAACGAAAATGGTGAAAATGAATTTCATTATATGGATCAAAAACATATTCTAGAGGGCGCCATAGACATTGATGAACCGTTTAACGAAATAAATGAGAATACTAATACCTCAACGGACATTCAACCTCTTGACTTGCAAACTCAGCATAGCGAGTATAAATATAGTCTAGATAACAGAAGTCAAGATATGAAAAGGTTAGGGCTTCTCAAAACTTTATGGAAAtgcaaaaaatgtaattatagaCACTCTTCAAAAGAAGCTTTATTAGAACATGTCCGAGAACATTCAAAACCAATTTATGAAGAACAAAAACCTCAAAGCCCCGTAATAATCAAGAAGCCCGAAAACGTACCAGATCCAGCGGACTTAGCATACCGTTGTGGTCATTGCAATCAATTATCAAATTGGAAACACGTTATACAGAGACATTGCCGGCTTAAACATGACGGTGTAATAAAAGTCGTAACTACAGTGAAGCAAAAAATAGAAGGACCGAGTTTATCTAATGAAATTGTATCTGATACCTGCACAAAGTGTCCTTTTAAAAGTAATGATAGAACTACGCTCATTATACATATGCAACAACATCAGCCTTCCACACAATATATATTCAAGTGCTATTTTTGTCCATTTTACGCGAAAGACGAACAAGAATTAGTTCAACATCTTTTATTACATGGCGTTACTGAACCCGAAGATTATGTGGCGAAAGCAATGGACTGTAAATCTCCACTACCTGATCAACACATTTTTCAATCGTCTTCAACCAAGAGACACAAATGCACAGAGTGTCCCTATGAAACGAACAGCAAGTCACAGTACATGTATCACGAACAATTCCATCGGCTCCCCGCCGATACACCATACAAGTGCCCGGAATGTAACTATAGCGTCTCTAAAAGACACTTGCTTCACCAACACATGAGAGTTCATGGTATTATATCAAGAAAGAGTGAAATAGATTCAGAGATTGAACCATCAGCATCGATTTCTTATAAGactgaaaacaaaaatgataacaatCTTGAAGAAATACCTTTTGTATGGGTTTCCGCTAAGAATGAATTccacaaaatgtttaaatgtcgTTATTGTTCATATGTTAATactcaaaaatgtaaaataccaAATCATGAGAAGATACACTGCATTGTTTTTGGAAATAATGAGATATTAGTGTATAAATGCTTAGACTGTAAATTTACATGCGACAGTGCTGGAAGGTTGTCTGAGCATTCCAAAACGCATGGCGAAATATATGGACGCATTTACTGTCCAGTTGAACCTGATATTCCAGATGAAGAGCAGATAGCAAAGTTACGAAAAgttattgaaatagaaaaaatgaatacaaatgaCGACATTGCAAAAGAGGCCTGTATaggtgaaaacaaaataataaaaactttgtactTTTGTCAACAATGTCCAGCCCGCTATTTCACAGAAAGCGAATTAAAAGTACATGATAAATTTCATGATCTagcatttacatataaatgtaaaaattgtgaaTTTTCCGTACTTCAGGAAAATGAGTTAGCCGCGCATGCCTTCATTCATTCCGATGAATATCACACAAAAACTAAAATGCTTAAGTTTATTCACAATATGCATCCAGCACACACGGAGCCTCGGCTAGAAGTGGTGCATTGTGCTGAAACTTCTGAAATAACCTGGATAGTTACCAATCCTGGCAAGAATTATGAAGGTATTGATAATTTGCTTAAAAAATCTCACGAGAATAAACACGTTCCAAAGCAATTCCACTGCAAAGAATGTCCAGCAAAATTTTTCAAGAGTTCGGCTTTAAATTATCATATGGGACTGCATGATGGCGATGGCGAACACAAATGTAAGAAATGCAGCTATGCAGTCAAAAATATTGGAAATTTGGCGAAACATGAATTACTACACGAGACCGAAGGTAAAACATCCTGTGATTACGAATCTGGGGAAGAtatggattttaaaaatatcccaTTATCAGGTACAGATCTATTTCAAAGAAAGACTGAAGCTCAAAAAAGAGTTCTAAATGATAAAGATAAACTAGTAAAACCCAACGATCATTTCCCACCTGTTCTCCAAGCCGATCCGCAGTTTGGATATTTGATGCATGGTAACCctgaatttatttatccaacatatttaaaaaatggacGACAAAAAGAGAAACGGTATAAATGCCACAAATGTCCATCCGCATTTGAAAAAAgagaacaatataaaattcacttatCATTGCATGGTTCTAAACAAAGGTACAAATGTGAACTTTGCGACtattctgtaaaatattatgcaaattaTGTCCAACATATGCGAAAACATCAAAAAAACGACGAAGCTTTAGCGGAGAGAAAGAAGGGCAGTACTGGTTCTCCAGAATCTGAGCCTGCAGTAAATAAACAAGATGACACTAAGGACAACATTAAGTTAGCGATCAAAACTATGCCGAAAAGTCTACCAAAAAGCGACTTCCAGCAATTTTCAATAAGTGACCAACAAACACTTAGATTATTACAACGGAGATGTTCCTTAAACAATTCGGCAAAAGATGTAAACCTGAATAATACCGCTGCATCTACGAAAGATCGAAAACTGCATCCGTGTTTCTTGTGCCCATATACAAACCAGCGTCAGGATGCCTTGGGTAATCATTACCGAAGACATGATCAAAACGACGAATTCAACAATGGCAATCACAAATGTTCATTTTGCGACTTGGTTGTTGTACAGTCTCACTTTCTACGAGAGCACTTAAAAACTCACTTTAATTACCAAAAAACTCTTACGCCTGAATGCTACGTCGCTAACGAAGATGTTAggtttacaataacaaaattagacACTGAAGACATTATTACTGATCTCAAACTGGATTTGCAAAGCAAGATGGATTCAAgtaaagtagaaaaaatatttgttaatgttaaaacagGAGagttattagtataa
Protein Sequence: MLQQMSSSPSAHVGEVATILRPLEGRLCGDASSEGSSDAAEDLELPQCKIRRNYSCTKCTFYTQNPRAYLIHTRDVHFVRLKIYDCGYCVYASRHHQKLVRHMKMVHGEIAAEKQTETEQPSFTTTTLEASEKEEDLIEEIEECDDMEVDDCGDELIERLDVDEDASGASNLTCNKKSKGNFYSCDKCNYVTHIKARYTKHVKYHSMPMIKCTMCDFRTPYKWNLDRHMKNHGGTGSFSCSICNFTADIRQSLTVHEMNHHTPPVGHSTSSRRRNRVGASDLSFPEEMLNGSALVPKEEEGSGDSRSSHSASEMGLQYAEREIVSSNSDSNDAANSETSPKNDLNDLRSSRYQELISRLEDSKSYKQNRKISRPIPQLIPLNSSTPNQNKSSTCEPPVKKLKESNSSDSPDSNSSIRLDSAKPDVTSIQVPPNCAPNNTKETPARKKNESFFDKLKERLLTETGEEGSLRCKNCGFESKCLSEHSVHEKTCTHVSNRTPTNTAMSSLSSTRCQNCRHRCKSSADLFVHMKTCKKNEESETKEITIETQDSNEAAFENPYKEVEPHPMENVVFVWNNINRESSKFDTPLDISINDDSTLPEPPQSFDSEIVDENDGMNLSPSQAIGKKVFKCPHCLFWATTASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSARDPDHTDAKVLMTDETGRRNYSKYNKFLAMPILNENGENEFHYMDQKHILEGAIDIDEPFNEINENTNTSTDIQPLDLQTQHSEYKYSLDNRSQDMKRLGLLKTLWKCKKCNYRHSSKEALLEHVREHSKPIYEEQKPQSPVIIKKPENVPDPADLAYRCGHCNQLSNWKHVIQRHCRLKHDGVIKVVTTVKQKIEGPSLSNEIVSDTCTKCPFKSNDRTTLIIHMQQHQPSTQYIFKCYFCPFYAKDEQELVQHLLLHGVTEPEDYVAKAMDCKSPLPDQHIFQSSSTKRHKCTECPYETNSKSQYMYHEQFHRLPADTPYKCPECNYSVSKRHLLHQHMRVHGIISRKSEIDSEIEPSASISYKTENKNDNNLEEIPFVWVSAKNEFHKMFKCRYCSYVNTQKCKIPNHEKIHCIVFGNNEILVYKCLDCKFTCDSAGRLSEHSKTHGEIYGRIYCPVEPDIPDEEQIAKLRKVIEIEKMNTNDDIAKEACIGENKIIKTLYFCQQCPARYFTESELKVHDKFHDLAFTYKCKNCEFSVLQENELAAHAFIHSDEYHTKTKMLKFIHNMHPAHTEPRLEVVHCAETSEITWIVTNPGKNYEGIDNLLKKSHENKHVPKQFHCKECPAKFFKSSALNYHMGLHDGDGEHKCKKCSYAVKNIGNLAKHELLHETEGKTSCDYESGEDMDFKNIPLSGTDLFQRKTEAQKRVLNDKDKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQKNDEALAERKKGSTGSPESEPAVNKQDDTKDNIKLAIKTMPKSLPKSDFQQFSISDQQTLRLLQRRCSLNNSAKDVNLNNTAASTKDRKLHPCFLCPYTNQRQDALGNHYRRHDQNDEFNNGNHKCSFCDLVVVQSHFLREHLKTHFNYQKTLTPECYVANEDVRFTITKLDTEDIITDLKLDLQSKMDSSKVEKIFVNVKTGELLV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01130403;
90% Identity: -
80% Identity: -