Ptie021073.1
Basic Information
- Insect
- Phaonia tiefii
- Gene Symbol
- stc
- Assembly
- GCA_963931995.1
- Location
- OZ008368.1:48179854-48187141[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 2 9.1e+04 -4.3 1.6 15 19 516 520 515 520 0.81 2 14 0.065 3e+03 0.6 0.2 4 10 549 555 548 556 0.95 3 14 6.3e-06 0.28 13.5 16.4 4 19 563 578 561 578 0.94 4 14 1.9e-07 0.0088 18.3 14.2 1 19 614 632 614 632 0.92 5 14 2 9.1e+04 -7.7 5.1 14 18 658 662 649 666 0.58 6 14 2.6e-07 0.012 17.9 20.8 1 19 672 690 672 690 0.98 7 14 0.00031 14 8.1 13.7 4 18 738 752 731 753 0.86 8 14 0.0077 3.5e+02 3.6 9.3 1 11 793 803 793 804 0.96 9 14 2 9.1e+04 -4.6 1.1 4 10 808 814 808 814 0.58 10 14 5.4e-10 2.4e-05 26.5 15.5 1 18 820 837 820 838 0.97 11 14 1.9 8.6e+04 -4.0 0.9 6 10 867 871 867 872 0.81 12 14 2 9.1e+04 -7.9 10.1 10 18 885 894 874 895 0.76 13 14 2.7e-07 0.012 17.8 14.6 1 16 931 946 931 953 0.94 14 14 3.7e-07 0.017 17.4 13.5 1 19 963 982 963 982 0.96
Sequence Information
- Coding Sequence
- ATGCATTTTATTCAAAATCGACTATGGGAACTCACAGTGGTTAAAACCactggtaaaataagtaagTATTTCAATCCGACCAGCGCTCTATTTTCCTATAATGACTTTGCACAAAATTCGAATAATAACACTTTATTTTCGGATAATCTACAAAACTATACCAGCAATGCATTATCAACCGCATCCGCTGCATTGATGGCCAATCCAAATGTTTACAATAACTCATATGGAAGCTTCAATAATACAAATGGCAGTGTGGGAGTAGGAGTAGGTGACGGTAGtcgtggtggtggtggtagtgaTGGGGATGGTACTACATATTATGCTAATCCCTTTGCAACGGGTTTCGATTTCTCGGCTACCAAATTGCAAGTTAATGCTCCAGAATTTGTGCCCCGATTCGATAGACTTTCGTTGAGCGAAAGTAATAGTCAGCAAGATActgaactatctcaaaaactaaaGAATGACACCAAAGATGAatcaaaaaagtatgaaatcgtTGCAGAACCACCAACAAGTTTTATTAAACAATACGAATCAGTACCATATAATGCTGCAACGGCGGATACGAATGCAGCAGATACTAGTTTCGAAAAGGAAGAGAAGAGGTTTCAACAACGCTCGGATAGACGTAATAATCGTCAGAATTCCATCAAACAAGATAAGGAAAATAATCGACGCAACAACAACCGAATGGAGAAAAATATGGAAAGATTCTCCCGCAATCTGCAAGAGAAGGGCCTTAATAACGATTCGGCTTCAAATTCCAATTCATCAACACCTTCTTTAACTATGAATGGTGGTGGTGGTAGAGAAGCCGTCAGAGATACTGGCGCCGGCGAGGGGGGATCACGAAATTATGGTGTTGGTGTCCAAAGGTCTACAGGAGCTTTTAGtaaatcacaaaatcattatagaAATGGTGAGAAAACGAGAAACAATCACAATAATGGTAGCGGTGGGAATAACATTGGAGCACCAGGAGGATTCAGTGATAATCTTGAGAATCGCGACAAAACCGAAAAATAtggcaacaacaataacagcggTAAGCGTTATCAGAATGACAGTGTCGCCGGCTGTCGACGTTCTCAGGACTTTGGCGCTGAGCGTGATGAACGTTTCGAACGTTATGCGGATCGAGGGGAACGTTCGGAACGTGGACGTAATCAACGTAATGATTATCATCAACGTTATGATAATTATCGTAGTAACAAGCGCCGTGACGATTGGAATCGTAATCGAGATCGTATTAATGGATTTCGTGTGGAGGAGAAATATTCTCAAGACAATGGCAAAGAAAGTCCTTTGAACAGTCCTGAAAAGCGGTCTCCCAAAAAGATATACCCGGAAAACGAAAAGCTCTCCCAGCGCGAAAAACTAATACGCGACATCGAATGTCGTCGCTTAGAATGTTTGGTTTGTGTGGAGGCTATTAAAGCCCATCAGGGTGTATGGTCTTGTCAAAATTGTTACCATATTCTACATCTGCAATGTATCATAAAATGGGCTTCTTCGTCGAAGTCAGACGATGGCTGGCGTTGTCCAGCCTGTCAAAATGTCGAAAAGGATGTACCCCGAGACTATTTCTGTTTCTGTGGAAAATTGAAGAACCCTTTCAATAATCGTCAAGATACAGCTCACTCCTGTGGAGAGGTTTGTGGTCGGGTTGAAGGCTGTCCCCACGCCTGTACTCTGCTGTGTCATCCCGGTCCCTGTCCGCCGTGCCAAGCACAAGTAAAACGCGAATGCGGCTGTGGTAAGACTTCCAAGACTATGCAGTGTTGCATCAAGGAAACCATCGAATGTGATTCCGCCTGTGAGAAACTCTTGAATTGTGAACAACATACGTGTCAGGAGAAATGTCATGATGGTAAATGCCCTGCCTGCAAAGAAAAAGTTGACCAAAAATGTCACTGTGCCAAACAAGAGCGTCAAGTGACTTGCACTCGAGAATCCCATGACAAACATTGCTATTCTTGTGGAAAGCCCTGCGGCAAAGACTTGGAGTGCGGCAACCACAAATGTAAGGATTGCTGCCACCCAGGCGAATGTAAACCTTGTAAAATGAGTCCCGAAACCGTAACTTCCTGTCATTGCGGTAAAATGCCCATAGTAGCACAGCAACGCAAGTCGTGCTTAGATCCTGTTCCAGAGTGTGACAGTATCTGTGGCAAGACCTTAAAATGCGGCAAAGCCACCAATCCCCATCACTGCACAATTAAATGCCACCCTGGCAATTGTCTCCCTTGTAATAAGCAAACAGCTGTGAAATGTCGTTGCGGTCACATGGACCAAATGATCAAGTGTCGCCAGTTATCTACTCGGGCCGATGATGCTCGCTGTAAAAAGCGTTGCATTAAGAGACGCTCCTGTGGCAAACATAAATGCAATCAAGAATGTTGCATTGACATAGATCATTTCTGCCCATTACCTTGTAATTATACACTTTCTTGCGGAAAACACAAATGCGATCAACCCTGTCATCGTGGCAACTGTCCACCCTGTTATCGTTCATCATTCGAGGAACTTTTCTGTGAATGCGGTGCTGAAGTCATTTATCCTCCGGTGCCATGTGGTACAAAGCGTCCAGTGTGCAAGCGCCCGTGTTCACGCAAACATCCTTGCGATCATCAACCTCAGCATAACTGCCATTCGGCGGCCACATGCCCGCCCTGTATGATGTTCACCACAAAATGGTGTTTTGGGCAGCATGAACAACGTAAAACGATACCTTGTTCACAGCAAAGTTTTTCGTGTGGGTTGGCATGCAACAAACCACTGCCATGTGGACGTCACAAATGCATAAAAACCTGTCATGAAGGTCCATGCCATACGCCTGGagagatttgtaaacaaaattgtacaACTGCCAGGGCCAATTGTGGTCACAAATGTATGGCTCCTTGTCATAATGGCGATTGCCCAGAGAATCCATGCAAAGAAATGGTCGAAGTACAATGCGAATGTGGTAATCGCAAACAAATGCGAACATGCGCCGAATTGTCCCGTGAATTTAGTCGCATTGCCACTGCTCAATTGGCGTCCTCAATGGCCGAAATGCAACGTGGCAACTACATGGAACTATCAGAGATATTGGCTCCCGTCAAACTGTCAAATAAATCCAATAAAACCCTGGACTGCAATGATGAGTGTCGTGTTCTCGAACGCAATCGACGCCTATCAATTGGTCTCCAAATTCGCAATCCTGATTTGCCTCAAAAATTGCTAACAAAATATTCAGATTTTACACGCAATTTCGCAAAACGTGACCCAACATTAGTGAGAACTATACACGATGCTCTAACAAATCTCGTTAAATTGGCCAAGGAAAGTAAACAGAAGTCGCGTTCACATTCTTTCCCCACAATGAATCGCGAGAAACGTCAGTTGGTGCACGAAATGTGTGAAATGTTTGGTGTGGAATCTGTCGCCTATGATGCTGAACCTAATCGTAACGTAGTGGCCACAGCGTACAAAGATAGAtcttGGCTCCCTGCTACCAGTATAATGGAGGTTATGAATCGTGAGTCGGGCCAAAGACGTGTGCCAGTGCCAAGTAACAATGCCTGGGGCCTAAAAAgataa
- Protein Sequence
- MHFIQNRLWELTVVKTTGKISKYFNPTSALFSYNDFAQNSNNNTLFSDNLQNYTSNALSTASAALMANPNVYNNSYGSFNNTNGSVGVGVGDGSRGGGGSDGDGTTYYANPFATGFDFSATKLQVNAPEFVPRFDRLSLSESNSQQDTELSQKLKNDTKDESKKYEIVAEPPTSFIKQYESVPYNAATADTNAADTSFEKEEKRFQQRSDRRNNRQNSIKQDKENNRRNNNRMEKNMERFSRNLQEKGLNNDSASNSNSSTPSLTMNGGGGREAVRDTGAGEGGSRNYGVGVQRSTGAFSKSQNHYRNGEKTRNNHNNGSGGNNIGAPGGFSDNLENRDKTEKYGNNNNSGKRYQNDSVAGCRRSQDFGAERDERFERYADRGERSERGRNQRNDYHQRYDNYRSNKRRDDWNRNRDRINGFRVEEKYSQDNGKESPLNSPEKRSPKKIYPENEKLSQREKLIRDIECRRLECLVCVEAIKAHQGVWSCQNCYHILHLQCIIKWASSSKSDDGWRCPACQNVEKDVPRDYFCFCGKLKNPFNNRQDTAHSCGEVCGRVEGCPHACTLLCHPGPCPPCQAQVKRECGCGKTSKTMQCCIKETIECDSACEKLLNCEQHTCQEKCHDGKCPACKEKVDQKCHCAKQERQVTCTRESHDKHCYSCGKPCGKDLECGNHKCKDCCHPGECKPCKMSPETVTSCHCGKMPIVAQQRKSCLDPVPECDSICGKTLKCGKATNPHHCTIKCHPGNCLPCNKQTAVKCRCGHMDQMIKCRQLSTRADDARCKKRCIKRRSCGKHKCNQECCIDIDHFCPLPCNYTLSCGKHKCDQPCHRGNCPPCYRSSFEELFCECGAEVIYPPVPCGTKRPVCKRPCSRKHPCDHQPQHNCHSAATCPPCMMFTTKWCFGQHEQRKTIPCSQQSFSCGLACNKPLPCGRHKCIKTCHEGPCHTPGEICKQNCTTARANCGHKCMAPCHNGDCPENPCKEMVEVQCECGNRKQMRTCAELSREFSRIATAQLASSMAEMQRGNYMELSEILAPVKLSNKSNKTLDCNDECRVLERNRRLSIGLQIRNPDLPQKLLTKYSDFTRNFAKRDPTLVRTIHDALTNLVKLAKESKQKSRSHSFPTMNREKRQLVHEMCEMFGVESVAYDAEPNRNVVATAYKDRSWLPATSIMEVMNRESGQRRVPVPSNNAWGLKR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -