Basic Information

Insect: Phaonia tiefii
Gene Symbol: Prdm14
Assembly: GCA_963931995.1
Location: OZ008371.1:181452846-181455507[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.043 9.4 9.1 1.2 2 21 255 274 254 277 0.87

2 9 0.0042 0.91 12.3 1.6 1 23 309 331 309 331 0.98

3 9 0.00035 0.076 15.7 5.5 1 23 336 358 336 358 0.97

4 9 0.00016 0.034 16.8 0.1 1 23 366 389 366 389 0.93

5 9 2.9e-05 0.0064 19.1 0.2 3 23 397 417 396 417 0.98

6 9 0.00012 0.026 17.2 1.4 2 23 427 449 426 449 0.96

7 9 0.00031 0.068 15.9 0.8 1 23 456 479 456 479 0.97

8 9 1.3e-07 2.8e-05 26.5 2.4 1 23 485 507 485 507 0.98

9 9 0.00046 0.1 15.4 0.9 1 23 513 536 513 536 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.043	9.4	9.1	1.2	2	21	255	274	254	277	0.87
2	9	0.0042	0.91	12.3	1.6	1	23	309	331	309	331	0.98
3	9	0.00035	0.076	15.7	5.5	1	23	336	358	336	358	0.97
4	9	0.00016	0.034	16.8	0.1	1	23	366	389	366	389	0.93
5	9	2.9e-05	0.0064	19.1	0.2	3	23	397	417	396	417	0.98
6	9	0.00012	0.026	17.2	1.4	2	23	427	449	426	449	0.96
7	9	0.00031	0.068	15.9	0.8	1	23	456	479	456	479	0.97
8	9	1.3e-07	2.8e-05	26.5	2.4	1	23	485	507	485	507	0.98
9	9	0.00046	0.1	15.4	0.9	1	23	513	536	513	536	0.98

Sequence Information

Coding Sequence: ATGGAATGCTTACTATGTTTGGAGTTGGATAAGGACATAACGGATTGCATAAGTATAAATTCATCTTCATGGGATGAACTAAAGATTCATAGTATAATAGAGAAGCATCTGTGGCCGATGTTATTGGTAAAACCTGAATCACAATGGCTCTGTTCGTCTTGTTGGCATGTATTACACGAATTTCACAAATTCTACATTCGCGTTGAAAATGCACACGAATCATTAATGAAAATCGAGCCTGATCCACCAGTCACGGTAGAAGATAATAAGTCTAAAGATTTTCTCTCGGATAATCTCCTTGAACCTGAAATAATTATAGACCACAACGTAGCATTTGTGAAACAAGAGAATGAGGAATCAGATAATGGTGATGGCAATAACGACGAAGATAATATCCCTCTAATACACATGCGTAAAAGCGTAGACAATTCTATGGAGGATTCCGTAAACGACAATGAAGAATGTATTGAAGATCCTTTGATCAAAACGACTAAATCTAAAGGCAGAGGGATCAAAAGAAGAAAACCTAAGAACGTTTTACTAAAATCACCTAAATTGATAacaaaagagaagcaaaaaacaaaggATGAACCAAATACAATGAAAAATGACACAGTTATCTCAGAAATACCGAAAGACAAGAATGCTTCCTGTTCTTTGATTACTCCAGGTAGCGAAAGTGCGTCATTTGTAAGATTATACCATGAATCAAAGGTAACGATAAACGAATACGATACTTTCATAGCAGAATATTTCAAGCTGTGTTGCGACCTTTGCCAAAAGCCATTTGGAACATTCACGGAACTACAGAGTCATTTCGACGAGGTTCACGAAATTCGCGGCTATGCAATGTGTTGTGAGAATAAATATATTAGTCGAAGTTTGCTGGTGGACCACATTAGTTGTCACTTAAATCCGGAATATTTTAAATGCCCCCATTGCCCCGAAATTCCAACACTACGAAAAAACTTTAAAGTGCATATGAAGTCGCATGATGAGGAGACACACAGCTGCGATATATGCAAAAAgagatttcaaaacaaatattttctacaaaccCACAAAAGAATACACGTGCCGGAAGAGGAAAGGAAATTCCTGTGTACAGTGTGTGACAAATCGTTTGCGACCGAACCTATGTTAACATACCATCAGAACGCCGTTCATCTTAAGACATACCGGAAACTTTGTGATATCTGTGGCGCAACATTTCGAGATGTTGAATCACTTAGACGTCATATGGGGAAACATGACGGGTTTACGGCTCCACCGCCGCTTAGTTGCGAAGTTTGTGGTCGTTTATGTGCAAACAAACGTAATTTGAAAATTCATATGAACTCGCAACATCCAGTGGAAAAGAAGGAGTTCATTTGCCATGTATGCTCAAAAAGATCGCCTAATGCAAAAGCGCTTAGACAACATGTTCGTGTTAATCATGAAACAGGTTTCATACACAAGTGTTCCATATGTGAAAAGGCGTTTAAGAGATCAGAGAATTTAAAGTCTCATATGAATATTCATACTGGTACTCATTTATATGAATGCGCTTGGTGTCCAAAGACATTCAATGCGAATAGCAGCATGCATCTTCATCGGAAAACAGCGCATCCCCAGGAATGGGAGGAGGAACGGCGTAAAAAATATTCTGGTAACCTACCGCCAAATTTTAAACCCCCGCCAACCAAAGAAAATCTAAGCAACTTTCCCCTACAATACCATTTTTAG
Protein Sequence: MECLLCLELDKDITDCISINSSSWDELKIHSIIEKHLWPMLLVKPESQWLCSSCWHVLHEFHKFYIRVENAHESLMKIEPDPPVTVEDNKSKDFLSDNLLEPEIIIDHNVAFVKQENEESDNGDGNNDEDNIPLIHMRKSVDNSMEDSVNDNEECIEDPLIKTTKSKGRGIKRRKPKNVLLKSPKLITKEKQKTKDEPNTMKNDTVISEIPKDKNASCSLITPGSESASFVRLYHESKVTINEYDTFIAEYFKLCCDLCQKPFGTFTELQSHFDEVHEIRGYAMCCENKYISRSLLVDHISCHLNPEYFKCPHCPEIPTLRKNFKVHMKSHDEETHSCDICKKRFQNKYFLQTHKRIHVPEEERKFLCTVCDKSFATEPMLTYHQNAVHLKTYRKLCDICGATFRDVESLRRHMGKHDGFTAPPPLSCEVCGRLCANKRNLKIHMNSQHPVEKKEFICHVCSKRSPNAKALRQHVRVNHETGFIHKCSICEKAFKRSENLKSHMNIHTGTHLYECAWCPKTFNANSSMHLHRKTAHPQEWEEERRKKYSGNLPPNFKPPPTKENLSNFPLQYHF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -