Basic Information

Insect: Phaonia tiefii
Gene Symbol: -
Assembly: GCA_963931995.1
Location: OZ008371.1:181493995-181495977[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.92 2e+02 5.0 0.1 2 23 212 234 211 234 0.91

2 10 0.071 15 8.5 0.2 6 23 244 261 244 261 0.97

3 10 9.9e-05 0.021 17.5 2.3 1 23 267 289 267 289 0.99

4 10 0.00014 0.029 17.0 1.0 3 23 295 315 293 315 0.97

5 10 8.8e-05 0.019 17.6 0.5 1 23 323 346 323 346 0.97

6 10 0.00047 0.1 15.3 0.2 3 23 354 374 353 374 0.98

7 10 0.00056 0.12 15.1 0.5 2 23 383 405 382 405 0.96

8 10 0.00051 0.11 15.2 0.6 1 23 413 436 413 436 0.97

9 10 6.9e-07 0.00015 24.2 3.9 1 23 442 464 442 464 0.98

10 10 0.00071 0.15 14.8 1.2 2 23 471 493 470 493 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.92	2e+02	5.0	0.1	2	23	212	234	211	234	0.91
2	10	0.071	15	8.5	0.2	6	23	244	261	244	261	0.97
3	10	9.9e-05	0.021	17.5	2.3	1	23	267	289	267	289	0.99
4	10	0.00014	0.029	17.0	1.0	3	23	295	315	293	315	0.97
5	10	8.8e-05	0.019	17.6	0.5	1	23	323	346	323	346	0.97
6	10	0.00047	0.1	15.3	0.2	3	23	354	374	353	374	0.98
7	10	0.00056	0.12	15.1	0.5	2	23	383	405	382	405	0.96
8	10	0.00051	0.11	15.2	0.6	1	23	413	436	413	436	0.97
9	10	6.9e-07	0.00015	24.2	3.9	1	23	442	464	442	464	0.98
10	10	0.00071	0.15	14.8	1.2	2	23	471	493	470	493	0.97

Sequence Information

Coding Sequence: ATGTATAAAACGGAATCACAATGGCTTTGTTTAACCTGCTGGCAAATATTACATGAGTTTCATAAATTCTACACGCGCATAGAAAGCGCACACATAAATCTTAGCGTGCTAATGAAAAGTGAGTCTGATCCGCCAAAACCAAAAGATTTTCTCTCGGAAAATTTACTTGAACCTGAAATAGTATTGGACCAGGCGTTGGCATTCGTAAAACAGGAGTATAAAGAATTTGAAACTGATAATGACGTTGAGGAAGACTATAAAGACGAGGATGATATTCCATTAATACACATGCGCCCAAGCGTTGACAGTTCCTTGGGAGATCCCATTAATGACAGTGATGAACATTCCATTGAAGACCCTttgattaaaaaagaaaaaaccaaaaagtccaaaaaaagaaaaagaaagtcgGATTCCATAAAGTCAGCTAAATTTACCAAAAAAGTTATACATGAAAACGACACAGAATGCAAAGTTAAATCCGACCCAGATATATCACAAACGCCGAATGACACCTCCAATAGTTCCCTACTTATAACAGGTACCGATAGAAATTCTCCCCTTCGATACTATTATCAGTCAAAAATGAATATTAGCGAATACGATTCATTTATCGCCcaacatttcaaattaatttgcAACAAATGTCAAAGTTCAGTTGGGACATTCGAGGAGCTGCAAAGCCATTTCGAAGTGGCTCACAAGAAGAAGCAGGGTTACGTTATATGTTGCGGCACAAAGTTTCGTGATCGCGGTTTCTTGGTGGATCATATAAATTTTCATCTTAATCCGGAATACTTCAAATGTGAGTATTGTCCACAGGTTCTAACACTCCGAAAAAGCtttaaaaatcacatgaaaacCCATGAGAAGATATATGGATGCGAAATGTGTGATAAGAAGTTTGTGAGCAAATATTTAGTGAATAAGCACAAGCTAACGCATCTTTCGGAGGATGAGAAGAAATTCCCATGTGACGCATGTGAAAAATGTTTTGCTTCAGAAAATTTGCTAACCAGTCACCAGAGAGTTGTTCACCTTAAAAAATACTCTAAACTTTGTGAAGTTTGCGGACAGTCTATACCAAATTCTGAAACATTTAAACGACACATGGAGAAACACGAAGGTATTACAGAACCAACTCTTAGCTGCGAAATATGTGGTCGTCTGGTGGGAAGCAAACATAGTCTGAGAGTTCACATGAAATCAATACACCCAGCAGATGGAAAACATGAATATATTTGTCACGTTTGTCTAAAAATATCTCCAAACAAAAGAGCACTAAGGGAACATATTCGTAGAGTCCACGCATCAGGATATAATCACAAGTGCACGATATGCGATAAGGCTTTCAAAAGAATGGATCACTTAAAgGATCATATGGCTACCCATACAGGTGTCGGTACATCAAAATGTCCTTGGTGTCCTAAAGTATTCAACGCAAACAGCAGCATGCATCTGCACCGCAAGAAAGTTCACCCTAAAGAATGGGAAGAGGTACGTCTTAAAAGGTATTCCGGTAAAAAGCCACCAAATTCAAAATCTCAATCCACCACTGATGTACATAATATTCCCCTGCAGTTTGATTTGTAA
Protein Sequence: MYKTESQWLCLTCWQILHEFHKFYTRIESAHINLSVLMKSESDPPKPKDFLSENLLEPEIVLDQALAFVKQEYKEFETDNDVEEDYKDEDDIPLIHMRPSVDSSLGDPINDSDEHSIEDPLIKKEKTKKSKKRKRKSDSIKSAKFTKKVIHENDTECKVKSDPDISQTPNDTSNSSLLITGTDRNSPLRYYYQSKMNISEYDSFIAQHFKLICNKCQSSVGTFEELQSHFEVAHKKKQGYVICCGTKFRDRGFLVDHINFHLNPEYFKCEYCPQVLTLRKSFKNHMKTHEKIYGCEMCDKKFVSKYLVNKHKLTHLSEDEKKFPCDACEKCFASENLLTSHQRVVHLKKYSKLCEVCGQSIPNSETFKRHMEKHEGITEPTLSCEICGRLVGSKHSLRVHMKSIHPADGKHEYICHVCLKISPNKRALREHIRRVHASGYNHKCTICDKAFKRMDHLKDHMATHTGVGTSKCPWCPKVFNANSSMHLHRKKVHPKEWEEVRLKRYSGKKPPNSKSQSTTDVHNIPLQFDL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -