Basic Information

Insect: Phaonia tiefii
Gene Symbol: -
Assembly: GCA_963931995.1
Location: OZ008370.1:11544280-11546694[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.047 10 9.0 5.0 1 23 226 248 226 248 0.98

2 10 0.00078 0.17 14.6 1.1 1 23 323 345 323 345 0.97

3 10 0.00011 0.023 17.4 1.6 1 23 431 453 431 453 0.98

4 10 1.8e-06 0.00039 22.9 4.3 1 23 468 490 468 490 0.97

5 10 7.9e-06 0.0017 20.9 1.1 1 23 496 518 496 518 0.95

6 10 0.0016 0.34 13.7 3.0 1 23 524 546 524 546 0.97

7 10 0.0001 0.022 17.4 0.5 1 23 552 574 552 574 0.96

8 10 0.0014 0.31 13.8 5.1 1 23 580 602 580 602 0.98

9 10 4.4e-06 0.00095 21.7 0.6 1 23 608 630 608 630 0.98

10 10 0.00013 0.028 17.1 0.5 1 23 636 658 636 658 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.047	10	9.0	5.0	1	23	226	248	226	248	0.98
2	10	0.00078	0.17	14.6	1.1	1	23	323	345	323	345	0.97
3	10	0.00011	0.023	17.4	1.6	1	23	431	453	431	453	0.98
4	10	1.8e-06	0.00039	22.9	4.3	1	23	468	490	468	490	0.97
5	10	7.9e-06	0.0017	20.9	1.1	1	23	496	518	496	518	0.95
6	10	0.0016	0.34	13.7	3.0	1	23	524	546	524	546	0.97
7	10	0.0001	0.022	17.4	0.5	1	23	552	574	552	574	0.96
8	10	0.0014	0.31	13.8	5.1	1	23	580	602	580	602	0.98
9	10	4.4e-06	0.00095	21.7	0.6	1	23	608	630	608	630	0.98
10	10	0.00013	0.028	17.1	0.5	1	23	636	658	636	658	0.99

Sequence Information

Coding Sequence: ATGTGTAGCAACACGGTCAATCTAATAGAAAACCTATGCAGAACGTGCATGGGAGAAGAAGAATCCGAATATTTCACAACGCCCAAGACACAAACAACTAAAGCTTTGATTTCCATATTCAATGAACCACAAGATTATATGGCATGCGATATCACCATTATGGATTTATTAATGCGGTCAGTTCCTCAACTGTCGATCGAAACAGATGATCTGTTGcccaaaaatgtttgtaaagtCTGTCTTGACAAATTGGTCAACATCCATGAGTTCCAACAGAAGTGCCTGCTGGTTGAGGGCAGATTAAGGGACTTAATTAAAGACGGTAATGACACACCGCAGCTAGTAGAAAAGGACATGATGGATGATCCACTTACAAGCAATCGAATACAAGAGACGTTCACAGATTTGCGTAATATTCTCAAAATTGAAATGGATgaacctttaatagacaataatgttcaggaaaataatgaatttgtCAGCAACACAATTGATAACTATGTTGATAAAAGTATTGAGTCGAAAGCAAACAGCGAAGACGAAGGGAGACATGATATGTGGGATTCTCAGCTTAGTGCATTAACATCAAGTAAAAGATCTTTACGACAGCGAAAGGCAACTGATAAGTATAGTTTGGCGGGACCAAATGGAAGCAGTATGCACGATGACAAAACTTTTACTTGTGATCAATGTGGCAGCCACTTAAAAACATGTAAAGGCCTTAAAAGGCATGAAAAGATTCACCTACGACAACATTCTGATAAAAAAGAACTCAATAAAAGACAATTCGAAATACAATATGATAATGATAGTGCTGAGAATGGGAATTGGCAATCTGATACAAACACAAATAAGGGAAAGAATACAGAAAATTCTAAAACGGACGTTTCTAAACATTTCCAAGAAATTGTTAAACAGTCAACTGGATCACTACCAATACAATTAGAAGCACCAAAAGATTACCCGTTTGCTTGTGATCAATGCGACAGTCGCCTAAAAACGCGGAAAAGCTTGATACGGCATCAAAAAATACACCTACAGGCACAGAGTGACAAAACTGAACCACGCAGGGTTGAAAATGAGTGGCAGTGTGATACTGATGGCGGTAGCAGTCATGATATAGATTTGCAGTGGTATGAAACAAATGATGAACAAGACTGGAGCACCAATATTGCTACAGGTGTCGAAAATCCTGAAGAGAAGGCTATTAAGGAAGTTAGACAACAGGAAATAAAAGATCACCTACTTAAACCTGAATTAAAACAAGGAGTGGACTTTGAAGAAAAGCCATTCGTGTGTGATGAATGTGGTAGTCGGTTAAAAACACGAAAGAGTTTAAAACGACATAAAAGAATACACCTTAGGCTGCCGGGTGCCAAAATTGAGCGatctaaaacaaaacatgtatGTGAATATTGTCAAAAAGTTTTCTGTCAATCTAGTTCACTTAAGGATCATTTAAGAGTTCATACTGGCGAACAGCCCTACTTATGTTCCGATTGCGGCAAAGCATTTACGAGTCTTAGTAACATGAAACAACATTTTCTACGCCATGGCACTGCTCGGCCTTACGAGTGTCCACATTGTCCCAAAACGTTTCCCTGTCACAGTGATTTAGCCTCGCACAAAGCAGTACATAACAAGGCGAAAACGCATGTATGTGATATCTGCGGTGCGGGTTTTGTAAAACCCTACTTgttgaaaaaacataaaatgtatCATACGGGGGAAAAGAATCATAAATGCGACTACTGCGATATGAGATTTGTTTTAGCCGATCAATGTCGCCGGCACATGCGCACCCATACCGGCGAGAAACCCTACAAATGTAAATATTGCGTAAGGGCATTTGCACAAAGTAATGATTTGATCAAACATTTGCGTGGTCACCTGGGAGATAACGTTTACAAATGTGATTTGTGCCCTCAAGGATTCCGTTTGCAAGGTGAACTAAGATCGCATTTTAATACACATAAAAATGATGACGATGAGACCAGAATGAGAAATTTACAAGCTCTTAAAAATGACGAATTACGGTTACAATTAAAGTTTAGTCTCTCACACAAAACGGATGATGATATATAA
Protein Sequence: MCSNTVNLIENLCRTCMGEEESEYFTTPKTQTTKALISIFNEPQDYMACDITIMDLLMRSVPQLSIETDDLLPKNVCKVCLDKLVNIHEFQQKCLLVEGRLRDLIKDGNDTPQLVEKDMMDDPLTSNRIQETFTDLRNILKIEMDEPLIDNNVQENNEFVSNTIDNYVDKSIESKANSEDEGRHDMWDSQLSALTSSKRSLRQRKATDKYSLAGPNGSSMHDDKTFTCDQCGSHLKTCKGLKRHEKIHLRQHSDKKELNKRQFEIQYDNDSAENGNWQSDTNTNKGKNTENSKTDVSKHFQEIVKQSTGSLPIQLEAPKDYPFACDQCDSRLKTRKSLIRHQKIHLQAQSDKTEPRRVENEWQCDTDGGSSHDIDLQWYETNDEQDWSTNIATGVENPEEKAIKEVRQQEIKDHLLKPELKQGVDFEEKPFVCDECGSRLKTRKSLKRHKRIHLRLPGAKIERSKTKHVCEYCQKVFCQSSSLKDHLRVHTGEQPYLCSDCGKAFTSLSNMKQHFLRHGTARPYECPHCPKTFPCHSDLASHKAVHNKAKTHVCDICGAGFVKPYLLKKHKMYHTGEKNHKCDYCDMRFVLADQCRRHMRTHTGEKPYKCKYCVRAFAQSNDLIKHLRGHLGDNVYKCDLCPQGFRLQGELRSHFNTHKNDDDETRMRNLQALKNDELRLQLKFSLSHKTDDDI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01175542;
90% Identity: -
80% Identity: -