Basic Information

Insect: Phaonia tiefii
Gene Symbol: -
Assembly: GCA_963931995.1
Location: OZ008371.1:181571221-181575673[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.0029 0.63 12.8 0.7 2 23 224 246 223 246 0.90

2 10 9.7 2.1e+03 1.7 0.0 6 23 255 272 255 272 0.95

3 10 2e-05 0.0043 19.7 4.0 1 23 278 300 278 300 0.99

4 10 0.00038 0.082 15.6 1.4 1 23 305 327 305 327 0.97

5 10 3.2e-05 0.0068 19.0 0.1 1 23 335 358 335 358 0.96

6 10 0.01 2.2 11.1 0.4 3 23 366 386 365 386 0.98

7 10 0.0013 0.28 13.9 0.1 1 23 394 417 394 417 0.96

8 10 0.00076 0.16 14.7 1.2 1 23 425 448 425 448 0.95

9 10 2.6e-09 5.6e-07 31.9 0.2 1 23 454 476 454 476 0.99

10 10 1.6e-05 0.0035 19.9 1.9 1 23 482 505 482 505 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.0029	0.63	12.8	0.7	2	23	224	246	223	246	0.90
2	10	9.7	2.1e+03	1.7	0.0	6	23	255	272	255	272	0.95
3	10	2e-05	0.0043	19.7	4.0	1	23	278	300	278	300	0.99
4	10	0.00038	0.082	15.6	1.4	1	23	305	327	305	327	0.97
5	10	3.2e-05	0.0068	19.0	0.1	1	23	335	358	335	358	0.96
6	10	0.01	2.2	11.1	0.4	3	23	366	386	365	386	0.98
7	10	0.0013	0.28	13.9	0.1	1	23	394	417	394	417	0.96
8	10	0.00076	0.16	14.7	1.2	1	23	425	448	425	448	0.95
9	10	2.6e-09	5.6e-07	31.9	0.2	1	23	454	476	454	476	0.99
10	10	1.6e-05	0.0035	19.9	1.9	1	23	482	505	482	505	0.96

Sequence Information

Coding Sequence: ATGAACTGCTTACTCTGTATGGAGATAGCTGATGATTTAAATAATATACAAGTCAATTCGTCAACATGGCATGATCAGCTTGTTCTAAGTATAATTGAAAAGCATCTGTGGCCCATGACCTTTTTCAAAACAGAATCGCATTGGCTTTGCATCACATGTTGGCAAGAATTATCTGGTTTCCATAAATTCTACAAGCGCATTGAAGATTTGCATCTTGatcataaatgtttattaaaCATCGAACCACATTATTTGGCGGTGCCAGACGAAAAACTATTTGAACCCGAAATAGAACTTGATCTGGACGTTGTTGCAATAAAGCAAGAAAAGGACTCTGACTTAGATAATGGCAACAATGCCGAGGACATTATTCCCATTATACATATGCGAGAATGTGTTGATTCAAATTACACAGAGGATCCTTTAACTAAAACAGAAAGGGCCAGAACAACGAGTACTGAACGAATAAATAAATCCTctattgaaaaacttgaaaaagcCGAAGCTGAAGATGACAAAGATGAATCAGATACAGAAGATAGTTCTCATAAGGCGGGCATATCACTGACATCATCACatagtaaaataaaaacagaacGTAAGTCGTACTACCGACCCAAAAGTAATCGTCATGAAGGCGACGAATTTGTAACCAagcattttaaattgaattgtaacATTTGCCAAACATCATTTGAGACGTTTTCCACATTActgcaacattttgaaaatgttcacAAGGAACGTGGTTATGCCATATGTTGTGAAGTAAAGTTTTATGATCGTATTCGGTTGGTTGATCATATAAATTACCACTTGGATCCggaatattttaaatgtaaacacTGTTCCAAAGTACTAACACAAAGGAAAAGTTTAGTTAATCACATGAAGATACACGAAGGGAAGCAGTTTAGTTGCGATATTTGCAGTAAACAATTTGTGGATAAGTTTAAATTAGATAAGCACAAATTGATACATATGTCGCAGGCGGAAAGAAAGTTTCCATGTGCAGATTGTGGCAAGTTCTACTCTAGCGAGGCCATGTTAACTCAGCACCGAAATGTTGTTCACCTGAATAAATATGCAAAACTGTGTAATATTTGTGGTCAATCAATGATTGATTCAAACACATTTAGGCTGCATATGGAAAAACATGAAGGCGTCCAACCAACCACATATAGTTGTGATATATGTGGTCTTATTGTAGCAGGCAAACGCCATTTGAAAGTACATATAGACTCTCAACACCCAGAGGGAGGCAAAAAGGAGTATACTTGCCACATATGTTCAAAAATATCGCCAACATTACGAGCTCTCAAAAGACACGTACTGTATTCACATGAAATGGGGAACAATTATAAGTGCACCATTTGtggaaaggcctttaaaagaCCTGAAAATCTAAAGgCTCATATAGCTACCCACACTGGTAATGACTTATATAATTGCCCATGgtgtccaaaaacattcaaatctaATGGTAACATGCACCAACATCGCAAAAACGTACATCCCAAGGAATGGGAGGAAGATCGACGCAAAAGGTATTCGGGTAAATTGCCACCAAGTTTTAAACCTCCATCAACGTccccaaatgtaaataaaaatgttcttaTGAAGCCagatttgtaa
Protein Sequence: MNCLLCMEIADDLNNIQVNSSTWHDQLVLSIIEKHLWPMTFFKTESHWLCITCWQELSGFHKFYKRIEDLHLDHKCLLNIEPHYLAVPDEKLFEPEIELDLDVVAIKQEKDSDLDNGNNAEDIIPIIHMRECVDSNYTEDPLTKTERARTTSTERINKSSIEKLEKAEAEDDKDESDTEDSSHKAGISLTSSHSKIKTERKSYYRPKSNRHEGDEFVTKHFKLNCNICQTSFETFSTLLQHFENVHKERGYAICCEVKFYDRIRLVDHINYHLDPEYFKCKHCSKVLTQRKSLVNHMKIHEGKQFSCDICSKQFVDKFKLDKHKLIHMSQAERKFPCADCGKFYSSEAMLTQHRNVVHLNKYAKLCNICGQSMIDSNTFRLHMEKHEGVQPTTYSCDICGLIVAGKRHLKVHIDSQHPEGGKKEYTCHICSKISPTLRALKRHVLYSHEMGNNYKCTICGKAFKRPENLKAHIATHTGNDLYNCPWCPKTFKSNGNMHQHRKNVHPKEWEEDRRKRYSGKLPPSFKPPSTSPNVNKNVLMKPDL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01175577;
90% Identity: -
80% Identity: -