Basic Information

Insect: Phaonia tiefii
Gene Symbol: -
Assembly: GCA_963931995.1
Location: OZ008371.1:33594185-33596738[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.14 31 7.5 0.3 1 19 201 219 201 219 0.91

2 12 0.0027 0.59 12.9 0.3 1 20 248 267 248 269 0.94

3 12 0.0018 0.38 13.5 3.2 1 23 288 310 288 310 0.98

4 12 9.9e-06 0.0021 20.6 1.4 3 23 327 347 325 347 0.97

5 12 0.00029 0.063 16.0 0.8 1 23 373 394 373 394 0.97

6 12 0.0019 0.42 13.4 1.5 1 23 400 422 400 422 0.98

7 12 0.00022 0.048 16.3 2.2 1 23 458 480 458 480 0.98

8 12 2.4e-07 5.1e-05 25.7 0.8 1 23 486 508 486 508 0.98

9 12 0.00014 0.031 17.0 3.5 1 23 514 536 514 536 0.99

10 12 9.9e-06 0.0021 20.6 3.5 1 23 542 564 542 564 0.98

11 12 2.7e-05 0.0059 19.2 0.4 1 23 568 590 568 590 0.98

12 12 0.0053 1.2 12.0 0.1 2 23 603 625 603 625 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.14	31	7.5	0.3	1	19	201	219	201	219	0.91
2	12	0.0027	0.59	12.9	0.3	1	20	248	267	248	269	0.94
3	12	0.0018	0.38	13.5	3.2	1	23	288	310	288	310	0.98
4	12	9.9e-06	0.0021	20.6	1.4	3	23	327	347	325	347	0.97
5	12	0.00029	0.063	16.0	0.8	1	23	373	394	373	394	0.97
6	12	0.0019	0.42	13.4	1.5	1	23	400	422	400	422	0.98
7	12	0.00022	0.048	16.3	2.2	1	23	458	480	458	480	0.98
8	12	2.4e-07	5.1e-05	25.7	0.8	1	23	486	508	486	508	0.98
9	12	0.00014	0.031	17.0	3.5	1	23	514	536	514	536	0.99
10	12	9.9e-06	0.0021	20.6	3.5	1	23	542	564	542	564	0.98
11	12	2.7e-05	0.0059	19.2	0.4	1	23	568	590	568	590	0.98
12	12	0.0053	1.2	12.0	0.1	2	23	603	625	603	625	0.95

Sequence Information

Coding Sequence: ATGGCAGACGAAACGGCTGATTTCATTACGGAAGTCAATGATGAAGATCCCGCTTGGTATATTTATGAGGCCCCAGAGTACGAGAGGAGTCTTAGTAATGGTAGCAATATGGAAATGTATGGATCGGTAGAAGCAGCTGTGAAAGATGAAGCGAATTCGAATGAATTTAAGTATGATGAAGGTGAAGTCGAAGAAGATGGTGACGTTTTGGCCGACTGTGTACAGGAAGCTGCCACTGGTGCTGACACGTCTAACCATAATCTCATACTGAAGGAGATTATAAACGATCAGGGACTTAAGATGGAAAGCTACTTTTGTCAGGAATGTAATGTGGAGTACAGTGATATTAATGATTTTCTATATCAACATCCGGGAGTGGAACTACTGAATGAAAACCCTGAGGAAGAAAGTACCCAGGAGTCGAATAACACACAAGACAAATTGTGGGATTTAGTAGAAGATTTAAAAGACGACATTGACGAAGAGAGCAGTGGGATCATACTGGCGGATACTGTTCAACAAAATGAAGTAAATCAGGAGGAAGAGAATGAGCtggaaaatgttgcaaaatcagAGCCCATAGATGATGATAACGATCGTTATTATTGCTATGAGTGTCAACAGGTGTTCACCGATTTAACATCGGCTGAGCAACATGATtgtacacaacaacaacaacagctacaGGAGCAAGATGAACAAGATGACTATGTAAAGGATGACACACAGGAGGCTGTAGACTTTGCCTGTGCCTATTGCAGCCAAGTGTTTTGCTCATACGATGATTTACTCAATCATATAGCGAACTGTCAACAAAAGGCAACTGTTAATTCGTCGAGTCCGTCGGCTGATGCCATTATATACCACTGTGAATTGTGCAATAAAAATTACCCCTCCCTACGTTCCTACAATAATCACCAACGTTTGCATAAAAAAGCAGATGGAGGAAAAATTCCGCCCGCATCAGGACCAATTATTTGTGAAATTTGCAACACCCACTTTGCGTCTTCGAAGAATTTGAGACTCCATATGAAAATGCACAACGAGCGTGCGTTAAAGTCCATTCAAGAAGCATTGCCTGCTGGTGCTCAAACGGAATACAGCGAATTAAATCAGTTCTATTGTgaaatttgtaataaaagCTTCGATCAACGACTTTTGGCTATACACAAGAACATGCATCAAAATGTCGAGGAATACAATTGCAGCCGATGTAACAAACAGTTTGAGAACCTTCTTAGCTACGAAATGCATATGCAGATGCATgcggaaaacaaaatgcattctGCGAGAAAATCCCTGACTATGTCAACCAATGTGAATGATGCCGCCAAAAATCCCAACACCAACAGCAGTAGTATTCCGAAAAGGCATCAGTGCCAATATTGTGGCAAAGAATTTCAACGCCCATATGAAAAGGTCAAGCATGAACGCATTCACACAGGTGAAAAGCCCTACAATTGTGAGGTATGTGGTAAATCATTTCGAGTTTCCTACTCCTTGACGTTGCATCTAAGGACACATACTGATATACGGCCCTACGTGTGTGCCACTTGTAACAAACGTTTCAAACAACAGTCCGTTTATGTGCATCACCTAAAAACTCACATTGCCGAAAGACAATATAAATGTGATCAATGCGGCAAAAGTTTTCGTACTTCTGTCCAACTGTGCGGCCATAAGAATAGTCACAAGAAACCTTTCAATTGTACCGAATGTAATCGACCCTTTGCCTCTTTATATGCCGTCAAGATCCACATGAAAACCCACAATAAGAgccataaatcaaataaaaatttaaaaaatcgttgTGAAATTTGTGGTGCCTCGTATGCAAGGATTTTTGCTTTGCGTTATCATCTAAAGGAACAACATGGCTTAGATGTTGATCCAGGTCAATTACTAAGTGCTGAATACACCCCGTCACCACAGCACAAGGAAATGGATAAGGAAACAGCCATTTtgatgaatgccgctaatgaggctcaaataaataaacatttgagTGAGTTTATTACTGATTCTGATGATAATGAAGGACTTGCAGATCAGCATGATGAAGAGGTGAATTTGACTTTGACGAAGGACATTGATCCGCATGAGGATATCATGAATCATCATGGTGACAGTGATGATTTGGAAGAAACAGCAGCAGCCACTCAAACTATATTAAATGCCAATGAAGAGataATTGATGATAATTTTCATGCCGAAGAGATTATTACAGATTGGTAA
Protein Sequence: MADETADFITEVNDEDPAWYIYEAPEYERSLSNGSNMEMYGSVEAAVKDEANSNEFKYDEGEVEEDGDVLADCVQEAATGADTSNHNLILKEIINDQGLKMESYFCQECNVEYSDINDFLYQHPGVELLNENPEEESTQESNNTQDKLWDLVEDLKDDIDEESSGIILADTVQQNEVNQEEENELENVAKSEPIDDDNDRYYCYECQQVFTDLTSAEQHDCTQQQQQLQEQDEQDDYVKDDTQEAVDFACAYCSQVFCSYDDLLNHIANCQQKATVNSSSPSADAIIYHCELCNKNYPSLRSYNNHQRLHKKADGGKIPPASGPIICEICNTHFASSKNLRLHMKMHNERALKSIQEALPAGAQTEYSELNQFYCEICNKSFDQRLLAIHKNMHQNVEEYNCSRCNKQFENLLSYEMHMQMHAENKMHSARKSLTMSTNVNDAAKNPNTNSSSIPKRHQCQYCGKEFQRPYEKVKHERIHTGEKPYNCEVCGKSFRVSYSLTLHLRTHTDIRPYVCATCNKRFKQQSVYVHHLKTHIAERQYKCDQCGKSFRTSVQLCGHKNSHKKPFNCTECNRPFASLYAVKIHMKTHNKSHKSNKNLKNRCEICGASYARIFALRYHLKEQHGLDVDPGQLLSAEYTPSPQHKEMDKETAILMNAANEAQINKHLSEFITDSDDNEGLADQHDEEVNLTLTKDIDPHEDIMNHHGDSDDLEETAAATQTILNANEEIIDDNFHAEEIITDW

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -