Basic Information

Gene Symbol
hang
Assembly
GCA_963931995.1
Location
OZ008370.1:172207679-172242456[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 19 0.21 45 7.0 1.3 3 23 448 469 447 469 0.92
2 19 0.53 1.2e+02 5.7 3.7 3 22 573 592 571 592 0.90
3 19 0.0055 1.2 12.0 1.1 1 23 667 690 667 690 0.91
4 19 0.44 95 6.0 2.3 2 23 730 752 729 752 0.93
5 19 0.0019 0.42 13.4 0.2 3 23 823 844 822 844 0.96
6 19 0.00012 0.025 17.2 0.1 1 23 852 875 852 875 0.92
7 19 0.00015 0.033 16.9 0.0 2 23 968 989 968 989 0.97
8 19 0.0052 1.1 12.1 3.2 2 23 1036 1058 1035 1058 0.93
9 19 0.0066 1.4 11.7 0.2 2 23 1067 1089 1066 1089 0.95
10 19 0.0045 0.98 12.2 0.1 1 23 1102 1125 1102 1125 0.95
11 19 0.0002 0.044 16.5 1.1 1 23 1178 1200 1178 1200 0.99
12 19 0.0032 0.68 12.7 0.9 1 23 1208 1231 1208 1231 0.96
13 19 0.65 1.4e+02 5.4 0.6 3 19 1240 1256 1239 1257 0.93
14 19 0.00058 0.13 15.0 0.3 3 23 1322 1342 1321 1342 0.98
15 19 0.00022 0.048 16.3 0.7 1 23 1377 1399 1377 1399 0.97
16 19 0.00057 0.12 15.1 0.7 2 23 1497 1519 1496 1519 0.91
17 19 1.7 3.7e+02 4.1 0.2 3 19 1540 1556 1538 1558 0.92
18 19 0.16 35 7.3 0.8 3 23 1574 1594 1574 1594 0.97
19 19 0.001 0.22 14.3 1.0 1 23 1814 1836 1814 1836 0.98

Sequence Information

Coding Sequence
ATGTCGGATGACCAACGTCTGCAATCACAGCAGAGGAGACACAATTGCTGTCGCCTGTGCTTGGCCCCGGACAATGAGTGCATCTCCATTTTGAACAGTTACGCAGCCGATAAGGAACCTTTGGCCAGCAAAATCCACAGCTGTGTATCCATTAAGATATCCATGAGCGATCATTTATCGCTACGCATTTGTCATGCCTGCATCAGTTATTTAAATTCCTGGCAGTCTTTCAAGAATCGATGTATATCAGCACATAATAAGCAACGTTCTTGGCTAGATGGAGCGCCACAAAAGTCAATTACACCCCATCCCGAAAATACATCAGACAACAACAATTGTGATGACCACCAGCATCATAAACATTCTCAGCCCCTTCAACAACTCCAACAACAACAGGATGAACAATCATTGGCATCCTCTATCTTGGAGGGTATATCGACGTTGAAAAAACGCAAATCTTTAACTGTCTATGTGAGTCctaaacatcaacaacaaatgaGTGTAAAACAGGCAAGCTCTCAAGCACAACCACCACCGCCACCGTCcctaaaaaaacatcaattacatCCTGAACTTGCTACAACAGCAACAGCTATCAGTAAGCCGTTGTTAACTAAGCGTCGTTATACTAAACATAAACATTCCCAGCGACAGTTAGGCGAATCGAGTGTACATCATTCGCATTCGGATGCTGCTTCTGCTACTGCTTCTCCTAGTCGCTGTAGCAGTAGTAGTGCAAATAAATTTAAACCGATTAAACGTGACAAAAAGCAGGTCGTGCAAAAGctccagcaacagcagcagctatCATTTGCGATACCCGTACTACCGTCTACTCCCGTTACTGCCACTGCTACAGTAACTTCTTGTTCATCTTCGAATGTAACAGCAACTTCTGCTTCTTGTTCCAGCACAACCACACTGACCACATCCGGCAGTAGCGTTGTTGCACCACCAATAACGTCCACTGTTTGTAGTGTTGGCACTGGTGTTGATTGTATTGCTGGAACATCGACCTCATCTGCGGCGGGAGTAGCAGCTTGTTCAAGTGCTGTCCAACAATTGCGTTTGTTTAGACGATACTCGTATAATcCCTTACCTGCAGTACAAATAAAGGACGAACCTCCTGAATTAGAAGACGATTATAACAGCACAAAGCATAACGATGAGTCCGACGAAATGGTGGATCCAACTATGTTTTTGGAGCGCACCGCCGATGAAGGAGAGGATGCATTAATGGATTCAACGGCAAATTATGATTATGAAAATATTCTGCCGCCTGGCGATTTAAAGCCTTTACCAGCTGGCACTGTTATACGTATGAGTACTAAAGAGGCATCTTGTCGTgcctgtaatttaaaattttccacgcGAGCCAATGCCCGTCGACATGAGAAGAATTTACATCCTCATTTGTTTGATACACTGGAAGAGAATGATACAACTATAAACAAACAGACAGCGGCGTTAAACGCTTCTTTGGAATTACAACGAGCCGTTGCAGCTGCCGTAGCAGCAGATGCTTGTAAACTAACAAGTGGTGGTGTTATAACACCGCAAAAATATCGCCATGAAGTTGTAACGGCCTTTAATAACTCCTGCGAAATGGGCTACGATTATGATAATCCCGAGAAGTATCAACATTTGCTGACAGACGAGAAGATCGTGTTTTTGCAGCAGAATGATGAGTTTCTACGACAATACCAAGCAATGACCTGCCGGTGCTGCAATCGTTTCTATAgcacatacaaaaatttcatggcTCACATGCGTAAAAAGTACCTTACATTGCCACGAAACTGTTGTTTCAACTGTCTAAAACTTAATGATTCAAAAGCTCTATTCATCTCCCATTTGAAAAAACGCAATTGCATTAATCTGCACAAAGTTCTACACACACTTATGGctaaaaatccaaattttgcGGCAGCTGTAAGTGCCACCGTGGCGGCGGCTCCAGAGAAAATGCGCGCAAAAGAACTGTTGGTTAATAAAATGTACGAGTGTAAACTGTGCCCGAAGACGTTCCGTTTGAAATTGGAGTTTCGCACACACGTCTACGAGGAACATGCCGACGTACAGCGCAAGGATATTGGAAATACTCAGTGCAGTTTCTGTGCTGTTGCTATTGATGATCCGGCAGAACGTAAACGTCATTATAATAATATGGACTGTATAGTTACTTTGCGCTGTGTAACGTGCGACACAAAATATGATACACAGCACAAATTCATGGAACATGTACAGGAAAAACATATGGCGAACTTTACCGAATCACAGGCTTTGCAGTTTGGTGGCGGAGGAGGAGGTGGCAGTGCGGATAATTCACCGGGGAAAAAGTCACATCTTGGTGGTATGGGCTGTGgtgCATCCTCAGCCGACGAATCCCGCAGTAGCTCGTTTAATGTTAATCTCATAAATACAAGTCAACCGCGCGCCCAATATTTCTCGCGCATGCCACAAGCATGCCCTATTTGTGGCCaacaatataataattataataacgtCCTACGCCACATGGAATCCAAACATCCCGACCAGTTGCCTCAGACATATAAATGTGTTAAGTGTGGTCAGGGTTATCCACGTCTATCAAATCTGCGTGAACATATGGTCGGTGCACATGGGGCTGATAAGGCTCGCCATACAGGATTCGAATACATTGTTAATGCAGATGCTGTCAAAGCGGCCACTGGAGGTACTGGCGGAGGCAATTCAGCGAACCCATATTCGGGACGTTATGATTATGTGATGAAGGATCTACTATCTATAACAAATGGTGGGCCACTGGGTAAGGATGATGACGAACCTGAGAATACTTccaagaaaatttgtttggattCCAGTGTTTCAAACAATAGCCACATCAATAACGGTACAACCACCAATCAAAGTCCTCGAGAATGTCCAGTTTGTAATGCAGTGTTTGCTAATAACATTGGCTTGTCCAACCATATGCGATCCCACCAAAGCGCCAACAATAACTTCAATATAAACTCAAAGTCACTGAGTGGCAACAACTTATCACCGTCTCCAATGGCGGGGCAACagatctttgtaaaaaaatcgatGGATCAGGCTGCCGATAGGCGTTTCCGTCGGATGCGTTGTCGCATTTGTCAACGTCGTTTCTCCTCCAAGAAATCATACCGTTATCACATGTTTAATGACCATCAAATACGCAACGTCCAGTTCATTAAATGCAAGCTGTGCGATGCCGAATTTGCCTACGAGAAAGGCTTGAAGGTCCATATGTTCAAAATCCACAACACTTTGCTAAAGGATGATATGATCATAAAACAGTATGAATGTGAAATATGCTCCATTGTTTATCGGACGGATGTTGAGTTGCAACATCACTTGGCGAATGTACATAATAAGCAAGGAGAGGCCTCAGCAATGGATGATGATGAGTATACTGCCGATGGTGGTGGAGGTAACGACACATCTGTGGCAGATATGTCGGGTATATCGACTCCGGTAAGTGGTGTAGGTGGTCCGGAGAGTACTGCTGTTGGTCCTTTGTATTGGTACCAATGTAAATACTGTCCCTCTAATTTCAATACCAATAAGAAGTTAGCCATACACATTAATTCGCACGACGAATTTGATTCCAATGATTATTCATGCAAGGATTGCGGAAATGTATACAGCGGTCGAAAGAGTTTATGGGTCCACCGGTACAAGAAACATCCACAGATTCCAGAGCCCTCAGATTGTGTTATGTGCAAAAAGGTATTCTTCGATAGTCAAATGTTGGATCATCATACGCCTACATGCAACCGGAAACCTATCTCTTCTGCCTCCATTGACGGATCGGGACAACCCGCCGTTTACAAACATAAGACTGGCGATGATGAAGACGATGAAGATGACGATCAATCACGCGATGCCGACGATTCTACTGCCACAAATCTTAAGAGTTCTACAAGCAATATGAAGATTAAACTTCCTGAAGTGGCGTGTACGATATGTCGTGCTCGGTTTACGGATCAGGATTTGTTTGCTAAACACATTCAAATGCATGAAATGGAATTGTACACCGATAACCCATTGGCAGCCATGTTCGACACCGGGCCCGCTGATCCAAATCAATTCTATATGGATCGCATGAATGACAATGGCGAGTATGCATGCGATTTATGCTCGAAGACATTTACACAAATGACTGCACTTAAAGTGCATAGGAAGTGGCATTTCAGAGGTGATAACAAACAGAACGATGCCGATCAACCTACACCGATTCAGGtccagaacaacaacaacaatatcagcaACAACAGCTTGCACCACcacaaacaacaacagcagcagcagcagcaacaacaaatatcGTCACAGCAACAGAAGACATCGACGATCAGCCATCAACATCTACTGGGATTACAAGCGGTGGGTTTAGTGCCGCGCCAACAACAATTTTCCAGCAACGTGCCATCCCACCAACACAACCAATCGATCAAATCTCTAAAACGTAAACGTGAACTTCAATGCCAATATTGTCCGTCCACCTTCATTAGTAACAATAATCTACGCAGACATTTATTTGAGCTTCATAAAAACGAAATTGGGAATTTACCGGAACCACCGAGAATCGACTGTGATGCGGCGAAAAACTGTCGCAAATGTAAtgtaaaattcgaaacaaaagcCGAATGGATTGAGCACAAAGTAGCGGATGCTCGGGTGATGAAGCCTTTCGGCCCATTTCAATGGGGTTGTGAATTGTGCGGTGCATATGTGTCGCGCAAAGAGAAACTTATAAATCATTTGCATAATCATATGAAGGATCAAGTCATAATGCCTGTAAAACATGATGCTTCTGGTCATCAGATCGAACCAAATTCTGGCCATGATGAACTGTCGCAGCATGGGgagtttaagaaaattaaattgccAACTCTGCAAGAGAAACCTAGTAACCTCCAGGTTGAAGACGAGGACGAATCTCGTGATAGCGCCAGTGCCAAATATCTGTACGAGGATGAAGGGGACGAGAATGACGAAAATGATCAAGATGATGGCGTTGAACACAATCAACATAGACAATACGAAGATGAAGACGAGGACGAAGATGAAGAAGTTATTGAAGAGGAATTTGATGATTTGGCTGTGGGTGCTCAACAAACCGTGGGTGGCGAAGAAGATGATGAAGTAGATGAAGACGATGAAGATgaggatgacgatgacgatgatgatgatgaggacgaTGATGATGGAGACGATGAAGAACCTGATACAAATGAAGACTCGAATGAGGTGCCACAATTTAAACCACCACAAATAACACAAAATCCTCCTCCTCCGAATCGTTCTTCGAATGATTCTGAAATAGATGAAGACGATGATGAGGATTCCGATGAGTTTGATGACGACGATGCATCTTCTACGGAAATTCGTAAACCTACCGTTGTGGCTAAGGCTATGGCTATAAAAGCCTTTTCCTGTGATCTATGCCAATTGTATTTCGATTCTCAGCAAGAACTGCAGAAACACGTTAAAATGCATTTCCTTAATGGTCCCGGCTCGGTGACGTTAACCGAGATCAAGTCGTCCAAGTCATCCTCATCTTCCCACAAGAGTCGTAGCAGTAGTAGCGATGTATTGGCCATGTCCTCTTCATAG
Protein Sequence
MSDDQRLQSQQRRHNCCRLCLAPDNECISILNSYAADKEPLASKIHSCVSIKISMSDHLSLRICHACISYLNSWQSFKNRCISAHNKQRSWLDGAPQKSITPHPENTSDNNNCDDHQHHKHSQPLQQLQQQQDEQSLASSILEGISTLKKRKSLTVYVSPKHQQQMSVKQASSQAQPPPPPSLKKHQLHPELATTATAISKPLLTKRRYTKHKHSQRQLGESSVHHSHSDAASATASPSRCSSSSANKFKPIKRDKKQVVQKLQQQQQLSFAIPVLPSTPVTATATVTSCSSSNVTATSASCSSTTTLTTSGSSVVAPPITSTVCSVGTGVDCIAGTSTSSAAGVAACSSAVQQLRLFRRYSYNPLPAVQIKDEPPELEDDYNSTKHNDESDEMVDPTMFLERTADEGEDALMDSTANYDYENILPPGDLKPLPAGTVIRMSTKEASCRACNLKFSTRANARRHEKNLHPHLFDTLEENDTTINKQTAALNASLELQRAVAAAVAADACKLTSGGVITPQKYRHEVVTAFNNSCEMGYDYDNPEKYQHLLTDEKIVFLQQNDEFLRQYQAMTCRCCNRFYSTYKNFMAHMRKKYLTLPRNCCFNCLKLNDSKALFISHLKKRNCINLHKVLHTLMAKNPNFAAAVSATVAAAPEKMRAKELLVNKMYECKLCPKTFRLKLEFRTHVYEEHADVQRKDIGNTQCSFCAVAIDDPAERKRHYNNMDCIVTLRCVTCDTKYDTQHKFMEHVQEKHMANFTESQALQFGGGGGGGSADNSPGKKSHLGGMGCGASSADESRSSSFNVNLINTSQPRAQYFSRMPQACPICGQQYNNYNNVLRHMESKHPDQLPQTYKCVKCGQGYPRLSNLREHMVGAHGADKARHTGFEYIVNADAVKAATGGTGGGNSANPYSGRYDYVMKDLLSITNGGPLGKDDDEPENTSKKICLDSSVSNNSHINNGTTTNQSPRECPVCNAVFANNIGLSNHMRSHQSANNNFNINSKSLSGNNLSPSPMAGQQIFVKKSMDQAADRRFRRMRCRICQRRFSSKKSYRYHMFNDHQIRNVQFIKCKLCDAEFAYEKGLKVHMFKIHNTLLKDDMIIKQYECEICSIVYRTDVELQHHLANVHNKQGEASAMDDDEYTADGGGGNDTSVADMSGISTPVSGVGGPESTAVGPLYWYQCKYCPSNFNTNKKLAIHINSHDEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPQIPEPSDCVMCKKVFFDSQMLDHHTPTCNRKPISSASIDGSGQPAVYKHKTGDDEDDEDDDQSRDADDSTATNLKSSTSNMKIKLPEVACTICRARFTDQDLFAKHIQMHEMELYTDNPLAAMFDTGPADPNQFYMDRMNDNGEYACDLCSKTFTQMTALKVHRKWHFRGDNKQNDADQPTPIQVQNNNNNISNNSLHHHKQQQQQQQQQQISSQQQKTSTISHQHLLGLQAVGLVPRQQQFSSNVPSHQHNQSIKSLKRKRELQCQYCPSTFISNNNLRRHLFELHKNEIGNLPEPPRIDCDAAKNCRKCNVKFETKAEWIEHKVADARVMKPFGPFQWGCELCGAYVSRKEKLINHLHNHMKDQVIMPVKHDASGHQIEPNSGHDELSQHGEFKKIKLPTLQEKPSNLQVEDEDESRDSASAKYLYEDEGDENDENDQDDGVEHNQHRQYEDEDEDEDEEVIEEEFDDLAVGAQQTVGGEEDDEVDEDDEDEDDDDDDDDEDDDDGDDEEPDTNEDSNEVPQFKPPQITQNPPPPNRSSNDSEIDEDDDEDSDEFDDDDASSTEIRKPTVVAKAMAIKAFSCDLCQLYFDSQQELQKHVKMHFLNGPGSVTLTEIKSSKSSSSSHKSRSSSSDVLAMSSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-