Basic Information

Insect: Phaonia tiefii
Gene Symbol: -
Assembly: GCA_963931995.1
Location: OZ008370.1:6039300-6041669[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 3.8e-05 0.0082 18.8 3.7 2 23 246 267 245 267 0.97

2 12 0.00058 0.13 15.0 0.5 1 23 273 296 273 296 0.95

3 12 0.0005 0.11 15.3 0.0 1 23 309 331 309 331 0.97

4 12 0.0074 1.6 11.6 0.8 1 21 336 356 336 359 0.96

5 12 0.0003 0.064 16.0 0.4 1 23 365 387 365 387 0.99

6 12 4.5e-07 9.8e-05 24.8 2.0 1 23 393 415 393 415 0.98

7 12 0.00011 0.023 17.4 2.7 1 23 421 443 421 443 0.96

8 12 1.2e-06 0.00025 23.5 2.1 1 23 448 470 448 470 0.99

9 12 0.0002 0.044 16.5 0.8 1 23 476 498 476 498 0.97

10 12 4.1e-05 0.009 18.6 4.1 1 23 504 526 504 526 0.98

11 12 1.8e-05 0.0038 19.8 0.9 1 23 532 554 532 554 0.97

12 12 0.00012 0.025 17.2 2.8 1 23 560 582 560 582 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	3.8e-05	0.0082	18.8	3.7	2	23	246	267	245	267	0.97
2	12	0.00058	0.13	15.0	0.5	1	23	273	296	273	296	0.95
3	12	0.0005	0.11	15.3	0.0	1	23	309	331	309	331	0.97
4	12	0.0074	1.6	11.6	0.8	1	21	336	356	336	359	0.96
5	12	0.0003	0.064	16.0	0.4	1	23	365	387	365	387	0.99
6	12	4.5e-07	9.8e-05	24.8	2.0	1	23	393	415	393	415	0.98
7	12	0.00011	0.023	17.4	2.7	1	23	421	443	421	443	0.96
8	12	1.2e-06	0.00025	23.5	2.1	1	23	448	470	448	470	0.99
9	12	0.0002	0.044	16.5	0.8	1	23	476	498	476	498	0.97
10	12	4.1e-05	0.009	18.6	4.1	1	23	504	526	504	526	0.98
11	12	1.8e-05	0.0038	19.8	0.9	1	23	532	554	532	554	0.97
12	12	0.00012	0.025	17.2	2.8	1	23	560	582	560	582	0.97

Sequence Information

Coding Sequence: ATGACCACAATTTTATTGGGTCGCATCTGTCGTACCTGTCTATTAGAATCTTCCACTATGCATAAGCTATTAGATACCAAAAAAGATCTCAAGATCGATGAAATGCTTTACAAGACAGTGCCCAATTTTGATATGTGCATGGATATGGAGGAGGATACACCACTGCCCGTTGAAATATGCAATGATTGCTTGGAGAAGCTACAAGTGTCCTATGATTTTCAACAAATGTGCTTAGCTAGCAATGAAcgcttaagaaattttgtcacacAAGAAACAGTGGATGTTCTGGCCCATGATGTGGATTTATGTGGCGAAGATTTTTTAAAGGACTCTGAGCAGCAGCGAGACAGTCATGAGAGCGAAAAAGATACACAAGAGATTTTCAAAATAGAGAACAGTGATGAATTAATGGCGGTTGTTTCATTTAGTGATGGAAACATTTTGGAAAGCCTTGAGACAGTTAAGATGGAGACACTGGCGAATGTAGAATGCATCAAAGACGATTATACAGAAGAAGAGAGACTAAAGGAAGTGCCTGCACAGTGTaatataaatgaaaacaataactTCGATAATGACTACTTTGAGATGGACAGCGACCCTGATGACGAATATTGGCCTAATGATGACAAGGATAACAGTGAAagCAACACACCTGAAGATTTTCAGAAATCGAATCTCAAGTTAACccgaaaatataaaaatcgcaAATCCACACAAAATACCAGCAACAAAACGTGTCCCGATTGccacaaaatatttaagaaacgcATGTTTCTGACCCGCCACATGTCTGTTCATTCTCTTGAACATCAGTTTGTATGCGACATTTGCCAATATCGCTATGCCAcagagaaattattaaaaattcacatttcctaCAAACACAAAAGTGGGGTCGTCATAAGTTTGGCTGGAGGGCCCTATCAATGTCCCGATTGCCCAATGATATTCCAGCAAACAAGAGCATTGGCTGCCCACAGGGTAATGCATTTGGAAAGAGACTTTAAGTGTGAAATATGTGGAGTCAACCTAAAAACGTTAGCGGCGGTAACGAGACATATGAATTGTAAACATCCTGGTGTTTTGCCGTATAAATGCGAAGTGTGTGAACAGGCATTTCCTGTGGAGACCCACTACAACGATCATATAAATATGCACAAAGGCTATAAGAAACATAAATGTGAAATGTGTGATAAAAGCTTTCCCAATACTACCGCTTTAAGGGATCACATGCGCACCCATACAGGGGAATCACCCTACCTGTGTTCGCATTGTGGCAAATCTTTTAAAACTGCCAATATATTGCGACAACATTTGCAAAGGCATGGCGAAAAGAATTTCCAGTGTCCCGAATGCCCTATGCGTTTTTATGTAAAAGTTAATCTGCAGAAGCATATGTGTACCCATTCCAAGGAAAAACCATATGTGTGTGATACCTGCGGTTCTTCGTTTACCCGAGGCGATTCTTTAAAGGCCCACAAATTCAAACATTCTGGTGAAAGACCTTTTAAGTGTGAGGAATGCAATATGAGttttgtatttaagcGTCATTTGATGAGACACAAAATAACCCATACAGGTGAAAAACCACACATGTGTACATATTGTGACCGTTCTTATGCTGCCAGCGGAGATTTGGTGAAACATTTACGTACCCATTTGGGTGAAAACACATATTTCTGTGACGAATGTCCAGAAACATTTAAATATCAACATGATTTGAGAGACCATAAAAATCAACACTACAAAGAGAGGTCAGAGGTTACAAATTGTGAAGAGGAGCAGCAAGAAGCTGCTTGA
Protein Sequence: MTTILLGRICRTCLLESSTMHKLLDTKKDLKIDEMLYKTVPNFDMCMDMEEDTPLPVEICNDCLEKLQVSYDFQQMCLASNERLRNFVTQETVDVLAHDVDLCGEDFLKDSEQQRDSHESEKDTQEIFKIENSDELMAVVSFSDGNILESLETVKMETLANVECIKDDYTEEERLKEVPAQCNINENNNFDNDYFEMDSDPDDEYWPNDDKDNSESNTPEDFQKSNLKLTRKYKNRKSTQNTSNKTCPDCHKIFKKRMFLTRHMSVHSLEHQFVCDICQYRYATEKLLKIHISYKHKSGVVISLAGGPYQCPDCPMIFQQTRALAAHRVMHLERDFKCEICGVNLKTLAAVTRHMNCKHPGVLPYKCEVCEQAFPVETHYNDHINMHKGYKKHKCEMCDKSFPNTTALRDHMRTHTGESPYLCSHCGKSFKTANILRQHLQRHGEKNFQCPECPMRFYVKVNLQKHMCTHSKEKPYVCDTCGSSFTRGDSLKAHKFKHSGERPFKCEECNMSFVFKRHLMRHKITHTGEKPHMCTYCDRSYAASGDLVKHLRTHLGENTYFCDECPETFKYQHDLRDHKNQHYKERSEVTNCEEEQQEAA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -