Ptie042167.1
Basic Information
- Insect
- Phaonia tiefii
- Gene Symbol
- ZNF595
- Assembly
- GCA_963931995.1
- Location
- OZ008369.1:36700121-36714561[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 22 0.016 3.5 10.5 6.6 2 23 34 55 33 55 0.97 2 22 0.00039 0.084 15.6 0.7 1 23 61 85 61 85 0.95 3 22 0.43 93 6.0 4.0 1 23 93 118 93 118 0.98 4 22 0.004 0.87 12.4 0.5 1 23 128 150 128 150 0.95 5 22 0.0094 2 11.2 0.7 3 23 160 182 158 182 0.93 6 22 5.3e-05 0.012 18.3 3.4 1 23 188 210 188 210 0.97 7 22 0.00054 0.12 15.1 0.2 2 23 217 239 216 239 0.94 8 22 0.01 2.2 11.1 1.0 2 23 258 279 257 279 0.93 9 22 3.2e-07 6.9e-05 25.3 2.0 1 23 285 307 285 307 0.98 10 22 0.032 6.9 9.6 1.7 1 23 315 337 315 337 0.79 11 22 7.8 1.7e+03 2.0 0.2 1 7 343 349 343 354 0.93 12 22 0.00068 0.15 14.8 4.5 2 23 367 388 366 388 0.97 13 22 0.00015 0.033 16.9 1.5 1 23 394 418 394 418 0.96 14 22 0.0007 0.15 14.8 0.8 1 23 426 451 426 451 0.97 15 22 0.004 0.87 12.4 0.5 1 23 461 483 461 483 0.95 16 22 0.0094 2 11.2 0.7 3 23 493 515 491 515 0.93 17 22 5.3e-05 0.012 18.3 3.4 1 23 521 543 521 543 0.97 18 22 0.0034 0.74 12.6 0.1 2 23 550 572 549 572 0.94 19 22 0.24 51 6.8 0.7 2 23 591 612 590 612 0.92 20 22 1.9e-07 4.2e-05 26.0 1.9 1 23 618 640 618 640 0.98 21 22 0.032 6.9 9.6 1.7 1 23 648 670 648 670 0.79 22 22 4.2e-05 0.0091 18.6 0.2 1 23 676 698 676 698 0.96
Sequence Information
- Coding Sequence
- ATGCAAGCACCCAGGGGTGTTTCGAATTTACTTCAAAAACAGGACGATGGATCAGATTCTGCATCACCCGTTTCCAAACCAAAAACAGCGTCGAGCCTTCGGTGTGACATTTGTTCCAGAAAGTTTCGGTTTCAACATTGCTTGGACGCTCACAAGCGAAGGCATGATGGACAGCGAGGATATGCCTGTACGCGCGAGAATTGTGAACGTACATTCAATCGATTAAGTTATTTGGAACAACATCTGAACGACCACGACGGTATACCACGTACAGTCTACAAGTGTGATAGGGACAATTGCAAACAGTCTTATACGTGTAAAACTGGGTTAAGAGGGCATATTCGCAAATATCACAGTGACACACCACCAAAAACTGAGGTTCATATTTGTGAAACCTGTGGTGTCGTGCTCAAAACCTCTGCATCTCTTAGAATGCATCGTTTCATCCATGTCGATAAAGCTGAATGGCCACTTGCTTGTGATGTGGAAGGCTGTTCGAGAAGATTTCGAAGTTTTGCAAATATGAAAATTCACAAAAAACGTCACGCTGGCATAAAGGACTACGCCTGTCCCCATTGCGATAAGCGATTTGTAACAATAACTAATATGAAGACCCACATCAATCACCATACACGGGAAAAAACATGGTCATGCGAATTTTGTCAACGAGTTTATACTACTGCAGCTGCCTTACGAAGTCATATTCTATATAAACATGGCCAACAAGCAAGTATAGATCCGGCATTTGCAATTAAGCGGACTCGCCGACTTCAGTGCAGTTTTTGTGACAAAACTTTTCGTAGGATCGAAggaaagaaatatcatgaaatgaTACATACTGGGGAAATGCCTCATACATGCAATGAATGTGGTAAAAAGTTCAGATCAACGCCAGGTCTCAAAGCCCACATGAGAACACACATGAAGGATGTGCCTAAAGGTTATGTTTGTCGTATATGCGGTCGTGACTTTTTTAATTCACTGATCCTAAGACATCACGAAATGAAGCATACGGGCGAAAAACCATATAAATGTGAAGAATGCGGCTCAGATTCTGCATCACTCGATTTCAAACCAAAAACATCTTCGAGCCTTCTTCGGTGTGACATTTGTTCGAAAAAGTTTCGGTTTCAACATCGCTTAGAAGCGCACAAGCGAAGGCATGAAGGACAGCGAGGATATCCCTGTACACGCGAGAATTGTAAACGTACATTCAATAGATTAAGTTATTTGCAACAACATCTCAACGACCACGACGGTATTCCACGTACACTCTACAAGTGTGATAGGGGCAATTGCAAGCAGTCTTATACGAGTAAACCTGGATTAAGAGCGCATATTAGCAAATATCATAGTGACAAACCAGCAAAATCTGAGATTCATATTTGTGAAACCTGTGGTGTCGTTCTCAAAACCTCTGCATCTCTTAGAATGCATCGTTTCATTCATGTCGATAAAGCTGATTGGCCACTTGCTTGTGATGTGGAAGGCTGTTCGAGAAGATTTCGAAGTTTTGCAAATATGAAAATTCACAAAAAACGTCACGCTGGCATAAAGGACTACGCCTGTCCCCATTGCGATAAGCGATTTGTAACAATAACTAATATGAAGACCCACATCAATCACCATACACGGGAAAGAACATGGTCATGCGAATTTTGTCAACGAGTTTATGCTACTGCGCCTGCCTTACGAAGTCATATTCTATATAAACATGGCCAACAAGCAAGTATAGATCCGGCATTTGAAATTAAGCGGACTCGCCGACTTCAGTGCAGTTTTTGTGCGAAAACTTTTCGTAGTGTCGAAggaaagaaatatcatgaaatgaTACATACTGGGGAAATGCCTCATACATGCAATGAATGTGGTAAAAAGTTCAGATCAACGCCAGCACTCAAAGCCCACATGAGAACACACATGAAGAATGTGCCTAAAGGTTATGTTTGTCGTATATGCGGTCGTGACTTCTTTAATTCACTGATCCTAAGACATCACGAAATGAAGCATACGGGCGAAAAACCATATAAATGTGAAGAATGCGGTATCTCATTTAGATGGCCCAATAATTTGACAAGACATCAGGGGCTGCACGAACGGGATAGACAAAATGAAAGCAAGGAAGCGACAAACGTTGATGCAAATGTTGAAAGCAATGACGTTTTGAAAGGCGACTAA
- Protein Sequence
- MQAPRGVSNLLQKQDDGSDSASPVSKPKTASSLRCDICSRKFRFQHCLDAHKRRHDGQRGYACTRENCERTFNRLSYLEQHLNDHDGIPRTVYKCDRDNCKQSYTCKTGLRGHIRKYHSDTPPKTEVHICETCGVVLKTSASLRMHRFIHVDKAEWPLACDVEGCSRRFRSFANMKIHKKRHAGIKDYACPHCDKRFVTITNMKTHINHHTREKTWSCEFCQRVYTTAAALRSHILYKHGQQASIDPAFAIKRTRRLQCSFCDKTFRRIEGKKYHEMIHTGEMPHTCNECGKKFRSTPGLKAHMRTHMKDVPKGYVCRICGRDFFNSLILRHHEMKHTGEKPYKCEECGSDSASLDFKPKTSSSLLRCDICSKKFRFQHRLEAHKRRHEGQRGYPCTRENCKRTFNRLSYLQQHLNDHDGIPRTLYKCDRGNCKQSYTSKPGLRAHISKYHSDKPAKSEIHICETCGVVLKTSASLRMHRFIHVDKADWPLACDVEGCSRRFRSFANMKIHKKRHAGIKDYACPHCDKRFVTITNMKTHINHHTRERTWSCEFCQRVYATAPALRSHILYKHGQQASIDPAFEIKRTRRLQCSFCAKTFRSVEGKKYHEMIHTGEMPHTCNECGKKFRSTPALKAHMRTHMKNVPKGYVCRICGRDFFNSLILRHHEMKHTGEKPYKCEECGISFRWPNNLTRHQGLHERDRQNESKEATNVDANVESNDVLKGD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -