Ptie060555.2
Basic Information
- Insect
- Phaonia tiefii
- Gene Symbol
- -
- Assembly
- GCA_963931995.1
- Location
- OZ008370.1:44286133-44287674[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.6e-08 0.00011 24.1 0.0 4 38 12 46 10 51 0.87
Sequence Information
- Coding Sequence
- ATGACTAAATCTAACGGAAAATACTGCGAAAAAGACATGCAGAAGGCTCTTGAAGCTGTAAAGACGCAAGGACTTTCTAAGAAAGCCGCATCTAAATTTTATGGAGTCCCTAGAACAACGCTGATTTTTCGATTAAGATCTAAGTTTTCCAAAACATGGAAAGGTCCAAAGACCGTTTTATCAACTGTCGAAGAGGATTGTTTGGAGGACTGGATAACGACATCCCAGCGAAAACGTTTCCCAAAGAGGAAAGAGGATGTTCTCCATGATGTAAAAGAATTCCTTGATGTCGATAAAAGAGATCATCCGTTTGGACCAGAAAATATGCCAGGAAATGGTTGGTTTAAGGCGTTTTTGAGCCGCCATCCATCCATTACCCTTATAACACCAGATCGTGTTACATCAGCAAGCTCAAATGTCGCTTCTTCTGATATTAAATCGTGGTTTAAGCAAATTGAAGGATTCTTAAAGGAGCAAGATTCAGATTGGCTGGCCATTCTGGACGATAGTACCAGAGTTTTTAATGGcgatgaaacaaattttttattgtgtCCAAAAACCAAAACTGTGTTGGCAGCAAAAGGTGCACGTAATATCTACGAAATAGACAGAGGGCTCGCAAAATCAAATTTAACAGTAATGTTTTCATTCTCTGCTTCGGGCGTGCTGGTTCCACCCATGGTGATTTATCCTTACAAAAGGATTCCAGAGGAAATTCGCAAATCGATGCCTAATGGATGGGGTCTTGGAATCAGCGATAATGTATTCCATCCACATCTTGTCAGCATCGAGACAAAATTCCCCGTTATATTTTTCGTTGACCGTCATGCTACCCATCAAACTTTGCCTGTCAGCAAACTGTGTGTCCAGCTAGGCATAATATTGATCGCTTTGTATCCAAATGCTACACGCATTTTACAGCCAGCTGATGTGTCAGCGTTTAAACCACTCAAAAATGGGTGGAACAAGAAAGTGTCTGAGTGGCGTCGACAACACATTGGCGAATCACTTACAAGGCTAAACTTTGCTCCCTTACTGGACGAAGTGGTGCTCTCATCCATTACgtctgaaattataaaaaatggctTTAGAGCCTGTGGGCTTTTTCCATGGGATATGGATGCGATTGATTTCTCCAGGTGTCTCGGGAAACCTTCCAACAAACAAACAACTGAACAGCAAATTCAACAGGaaacaacaataaatgataaaagtATCTCGTATGCCACTTTTTCTCAATTGTTTGGTACCAAAAAGTTAGAAGAATTCGCAAATACTCACAGTGGCGGTGACAGCCCATTGCTTTGTTCGGAAGAGTGGAGAATACTATACCAATTATTCCTAAAATTTAACCCAGACTGTGAACCTTGTCAGGATTCGATTATTAATGTTAATAACGGCAACAATTTAGAGGATAATGGGACAATCATGGCAGATGATTTCCTAGATGGACtagatataaataatattgagGCATTTAtatatgaatcgagtccttga
- Protein Sequence
- MTKSNGKYCEKDMQKALEAVKTQGLSKKAASKFYGVPRTTLIFRLRSKFSKTWKGPKTVLSTVEEDCLEDWITTSQRKRFPKRKEDVLHDVKEFLDVDKRDHPFGPENMPGNGWFKAFLSRHPSITLITPDRVTSASSNVASSDIKSWFKQIEGFLKEQDSDWLAILDDSTRVFNGDETNFLLCPKTKTVLAAKGARNIYEIDRGLAKSNLTVMFSFSASGVLVPPMVIYPYKRIPEEIRKSMPNGWGLGISDNVFHPHLVSIETKFPVIFFVDRHATHQTLPVSKLCVQLGIILIALYPNATRILQPADVSAFKPLKNGWNKKVSEWRRQHIGESLTRLNFAPLLDEVVLSSITSEIIKNGFRACGLFPWDMDAIDFSRCLGKPSNKQTTEQQIQQETTINDKSISYATFSQLFGTKKLEEFANTHSGGDSPLLCSEEWRILYQLFLKFNPDCEPCQDSIINVNNGNNLEDNGTIMADDFLDGLDINNIEAFIYESSP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01175026;
- 90% Identity
- -
- 80% Identity
- -