Ptie041947.1
Basic Information
- Insect
- Phaonia tiefii
- Gene Symbol
- bab2
- Assembly
- GCA_963931995.1
- Location
- OZ008369.1:32029727-32035153[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.2e-17 1.4e-13 52.6 0.0 1 43 56 99 56 101 0.95 2 2 7.3 1.4e+04 -1.9 0.1 18 27 157 166 156 166 0.88
Sequence Information
- Coding Sequence
- ATGATTGAAAGCGGACATCCTTGGATGGCTGGTGCATCAACGTCATCGGTGACTGACAGCTATCAGTATCAATTGCAATCCATGTGGCAAAAATGTTGGAATACTAATCAGCAAAACCTTGTGCAACAATTGAGATTTCGTGAGCGCGGCCCATTAAAATCGTGGCGTCCGGAGGCAATGGCAGAGGCCATTTTTAGTGTGTTAAAAGAAGGATTGTCCCTTTCACAAGCGGCTAGAAAATTTGATATACCCTATCCGACATTTGTTTTATATGCAAATCGTGTACACAATATGTTGGGTCCTTCACTGGATGGTGGTTCGGATCCTAGGCCTAAGGCGCGCGGTCGTCCTCAGCGTATACTGTTGGGTATGTGGCCGGAGGATCTAATACGTTCGGTCATCAAGGCTGTGGTGTTTCGGGATTATCGTGAGATCAAAGATGAAATGGGCAACATGCCGTTTGCCAATGGACAAGCACATGCGGCTGCCATCTTTGGTTCTGCTAGTGGTAGTTCTCCGTCTGCCAATGGTTACCATAGCGCCGCCAAATTGGCGGCTCAAAGTGCCACCATTGGCCATCAGGACTCTGCTAGTCCTCTCTCATCTATGACCGAGAATTTGAGGCGTCAAATTATGTCGCAGCAGCAACAATCGCCCATCGCGCACTCCATGAATATTTACAAAGCTCCAGCTTATGTCCAGCGTTCCGAAATCGATGATCAACTTTCGGCAACGTCGTCACAAAAACAGCTCAGCGCCGATCGTAGAGGTGCGGAAAATTTACCCGATTTAAGTGCTTTGGGACTAATGGGATTGCCGGGCCTTAATGTTATACCctctggtggtggtggtggtggcgctGGTGCTCGTAACAATCAAATGCATTCCAATGCCGCGGCTGCCTTTTCTAGAGATTTGGAACGTGAACGAGAGCGCGAACGCGAGCGCAATCGCGAAAGAGAACGTGAACGAGAGCGCGAACGCGAACGAGAACGCGAAAGAGAACGCGAACGTGAGCTTAAGGAGGCCATGCAAGCCCGTCAGTATGGCAATCAATCCAGAGGTTCTGCAACCGGCGATATGCCAAAGACCTCGGGACCCACCTCACCCTTCCCACACATAAAGAATAAAGAGCAGCAACATACCCAGCACTATGGCTACAATAAGCGGTTTTTGGATAATCTACCGCCCGGCATTGATTTCGAGGCTTTGGCCAATGGTTTGCTACAGAAATCCTCCGCAGCCAATAAGAGTCCACGTTTTGAGGACTTTTTCCCCGGCCCCGATATGAGTGAACTCATAGCGAATGCCGAAGCAGCTGCCAGTGCCCAATTTCCCGCCCAACGAGAGTACAATATAATGAAAATCAAATTGGAACATCAGCCGGCCGAGGTCCATCATGAGGATTGA
- Protein Sequence
- MIESGHPWMAGASTSSVTDSYQYQLQSMWQKCWNTNQQNLVQQLRFRERGPLKSWRPEAMAEAIFSVLKEGLSLSQAARKFDIPYPTFVLYANRVHNMLGPSLDGGSDPRPKARGRPQRILLGMWPEDLIRSVIKAVVFRDYREIKDEMGNMPFANGQAHAAAIFGSASGSSPSANGYHSAAKLAAQSATIGHQDSASPLSSMTENLRRQIMSQQQQSPIAHSMNIYKAPAYVQRSEIDDQLSATSSQKQLSADRRGAENLPDLSALGLMGLPGLNVIPSGGGGGGAGARNNQMHSNAAAAFSRDLERERERERERNRERERERERERERERERERERELKEAMQARQYGNQSRGSATGDMPKTSGPTSPFPHIKNKEQQHTQHYGYNKRFLDNLPPGIDFEALANGLLQKSSAANKSPRFEDFFPGPDMSELIANAEAAASAQFPAQREYNIMKIKLEHQPAEVHHED
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00679401;
- 90% Identity
- -
- 80% Identity
- -