Ptie043412.1
Basic Information
- Insect
- Phaonia tiefii
- Gene Symbol
- lolal
- Assembly
- GCA_963931995.1
- Location
- OZ008369.1:67249331-67255161[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.1e-18 2e-15 58.4 0.0 2 45 525 569 524 569 0.97
Sequence Information
- Coding Sequence
- ATGACCGACCTCCTCGATTTTTTAACACATGTTACCCTTTTTACAACAAATCCATGTCAACATCCAATTGTTATATTGAAAGATGTGCAATATGACGATCTCAAGACAATGGTCGATTTCATGTACTACGGTGAAGTGAATGTGTCGCAAGAGCAATTACCTCATATATTGAAAACGGCGGAAATGCTTAAAATCAAAGGTTTAGCCGAAATGCCCACCGATCCTGCCAATTTAACAAAATCCGAAAGTAAATCCTCAAATGAAGCTACCGAATTGGTAGGCAGCGGCGCTGGCAACAATGTAGTGAGTGGTGGTAGTAGTGGTGGCAACAGTAGTGCTGGTGGTGGTCTTGGCAGTAGTAGTGGCGCTGGCAGTGTTAGCGATTCATTGTGGGGTAGTACAGAGTCACAgtttcagcagcagcaacagcaccaacaacagcagcagcaacaacaacaacaacatcagcaccaGCAACATCACCAacaattacagcaacaacaacagcagcagcaacaccaccaccagcaacaacaacaacagcaactgcaTGCTCAGCTACAAAACAGTCAGACACAGACGactcaacaacaacagcagcagcaacaacatcttCAGCAATTAAGACGCACACCATCACCTCTAGGCGCTGGCGCCTCCCCGGCAACCAGGAGAAAACGTTTACGAAAATCCTCCAATAACGGTTCGGGTGATCGCACCAATTCTGAAGATCACAACACATCGTTGGATGCCGCCACAGCGGGTGGTTTAACACTATCACAAATGAGCCAAATGACATTTGGCGGTTCTGCTACGAATAGCGCTCTTGGTGGCTTGGCTGCACATTCGTTACATACGGCTAAACTACTTAAAGAAGCGTCAGCTAATGATTTAGAACAGAACCCCCAGGATTCAGACAGCTTAGACGATACCCATGGTCATGTGCATATGCAAATTAAGCCTGAAGTTGACATTAGCGGTGTACAACAACAAATGCCATTGGATATTTCTGGTGCCACAACTCCGTCGGAACATGATGCCCCTAATTCACAATCTGCACATTCAGGTTTACAATGGACGGTTGTTGAGTCGAATTATTCACGATTTTCGCTGCCATCATGTCCCACCAATTTAATTGGCAATACCAACAACACCAACCATCAAAATCCAAATAACCAGAATAACAACAGTTCCTCAAGTGAACAacaccagcagcaacaacaacagcaacgccatcagcaacagcagcaagATGCTGTGAACagtcagcaacaacaacagcacttGCAACAATTGCAACAGTATCAGCAGCAACACCAACAGAACTCGGCCTATTCGCCACAAATTATCACAGTTAGTGGTTATACAAATGCGGCAGCAGCAGCGGCGGTGGCTGCTGCCCAAAACATGTCACCACCCTCGCCAAATGATGGTGGCAATATGGTGCAAACAGTATATAGCCAAGGTCCATCACCGTCAGCATCACCCGTGGGTAACGCAGCCGGTAGTATTGGCAGCAATTCCGCAAATAATTCCAATATTAAACGTAAACGATCTGTCAACCCCCAAGGAGATGAGAATTTCATTAGAGCCCTGGAGGCAGTGCGTTCAGGTGGAATTGGATTTTGCAAAGCTGCTCGTCTATATGGTGTCAACAATCGCACACTGTGGCTGGAGTATAAAAAACGGGGATATCCCGTCTCAAGGCCTAGCATTAAGTCGCGTGTGGTTAAACAAGAACCGAATCTCTCGCCTTCGCCAACTCCGCCGGACCACGCCACTGATGATACCAATGAAAACTATGATCATATGGCAGCAGCAGTGGCTGCTGCGCAAACGGCGGCTCTAAATATGCAAATACCACCTACGTCGGAGACGCCAACGCCGTCTCTAATGTGTGCGCCTCACCATGGAGGTCCCGCTACAGGTCCTACCACCCATCCTACAATGGGTGTTATGGGTTTCTTAGATGCACGCCATATGGATTTCCCAACCAGTCTACATTCAATGTCTCGACAACGTTATATTGATGCGACGGGAGCTGGTGGTGGTGCTGGATCTGGTACCATTAATGTCAATCCGGCAGCTGCAATGAATTTACAGAGTATTAATTTCAACTCAATATAG
- Protein Sequence
- MTDLLDFLTHVTLFTTNPCQHPIVILKDVQYDDLKTMVDFMYYGEVNVSQEQLPHILKTAEMLKIKGLAEMPTDPANLTKSESKSSNEATELVGSGAGNNVVSGGSSGGNSSAGGGLGSSSGAGSVSDSLWGSTESQFQQQQQHQQQQQQQQQQHQHQQHHQQLQQQQQQQQHHHQQQQQQQLHAQLQNSQTQTTQQQQQQQQHLQQLRRTPSPLGAGASPATRRKRLRKSSNNGSGDRTNSEDHNTSLDAATAGGLTLSQMSQMTFGGSATNSALGGLAAHSLHTAKLLKEASANDLEQNPQDSDSLDDTHGHVHMQIKPEVDISGVQQQMPLDISGATTPSEHDAPNSQSAHSGLQWTVVESNYSRFSLPSCPTNLIGNTNNTNHQNPNNQNNNSSSSEQHQQQQQQQRHQQQQQDAVNSQQQQQHLQQLQQYQQQHQQNSAYSPQIITVSGYTNAAAAAAVAAAQNMSPPSPNDGGNMVQTVYSQGPSPSASPVGNAAGSIGSNSANNSNIKRKRSVNPQGDENFIRALEAVRSGGIGFCKAARLYGVNNRTLWLEYKKRGYPVSRPSIKSRVVKQEPNLSPSPTPPDHATDDTNENYDHMAAAVAAAQTAALNMQIPPTSETPTPSLMCAPHHGGPATGPTTHPTMGVMGFLDARHMDFPTSLHSMSRQRYIDATGAGGGAGSGTINVNPAAAMNLQSINFNSI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01397556;
- 90% Identity
- iTF_00817531;
- 80% Identity
- iTF_01175265;