Ptie043420.1
Basic Information
- Insect
- Phaonia tiefii
- Gene Symbol
- bab2
- Assembly
- GCA_963931995.1
- Location
- OZ008369.1:67381216-67383111[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 3.5e-08 6.7e-05 24.8 0.0 10 40 407 437 399 441 0.83 2 4 8.8e-13 1.7e-09 39.5 0.0 8 44 459 495 454 496 0.91 3 4 0.33 6.5e+02 2.4 0.0 28 38 526 536 526 542 0.88 4 4 1.7e-16 3.2e-13 51.4 0.1 4 41 564 601 564 603 0.93
Sequence Information
- Coding Sequence
- ATGAACCATTTAAAGTGGATGGGCCATTCGGCAACCATATTAGATATACATAAAAATTTGCGAGCAGACTTACAGACGTGTGAAGTGACGTTGGTAGCCAAGGGCCACTCTGTAAAGGCACATCGTTTCGTTTTATCATCATGTAGTGATTTGTTGAGAACTCTGCTGAGCGATATTCCCTTAGGGCAAGAATGCGCTATTATGGTGCCGGACATAAAGGGCCAGTTGTTGGATAATGTGTTGGCTTTTATCTATTTGGGAGAATGCTCGCTGTCCTCATCGAATTTATCAGAGTTTCTTGAAGCTATTAATGTTTTGGGCATAAAGAGTGCAATTAGTTTTGAATGCAATACAAATGCTCTTCAGGCTGCTCAACAGCACCAAAATCAAGGCAACAACAATGAAGTGGTGTCATCCCCATCTACCGGTAGTCTGATGGATGGGGGCACAATGACCGCTGTGAGACATGTAAGTGCTGGTGCAACATTGCCTGGTACCAGTGTTTCAATGCAACAAGAGGAATTGCTTGAAAATCAAACGGTTGTACATGCGGATACACAAACAGTTTCAACTAGTTCTAATGTCATTGCTGCGGATGCTACCAGTCGAGAACTAGAATTTTTAGATGTATACCATGAACCTCAACACAAGATTACCTACTCCATTGAACATGTGCCTGGCTCAACGGGCGGAAATGAATTTATACTTACTGAGAACTCTGGCACATTCACATTGACTCACCACAATCATAAACTGGAATCTAATTCTAGTGCAGAATCCACCAATATGGAGGTGACAGAAGACGAGGCATGTGAATCTCATATCATTGAGGAGTATAGCAGCGGAGATGAACCCTTAATACATATCGCAGAAGCCACAGCGAATGTGTCAGTTCCAGTTCAAACGGCAAGTTTAGCAACCACCACCTCAAGCACTGCTCCAATCATACAAGTTAAACCTAAACTCAAAACTATAAAGCTTAAGAGTCATTCGACATCCACATCTGCAAATATACCTAAAATAGAGCGAATGAACACAACTATAGataattctcaaaataccgaagATCCCATGTCGATGTTACATTCTTCCAGTACAGATGATGGTTTTACGTTAATAAAGGTTAACAGCGCTAACGACTCTCTTGGCAATACCACTCATGAATCCGTTGATTTCTCCATGAACTCCTCAGGATTGACAGCTGCCGATATGGCATACCAGGCTATGGCTAATGAGGGCATGTCCTTACCGAAAGCCGCTGTAAAATTCAATGTATCTAAATCTGAACTATGGAGCCGTGTACGAAGAACTGGTGTAGAAAATCTACACAAGTCACAAAAGCTTGATCCTGAGAAATTGGATGTTATTGAGATGGCAAGTCAGGCGGTAATCAGTGAAGGTCTTTCCCTCCAAAAAGCTGCAGTGCGCTTTGATATCTCTAAAACTGTACTATGGCGAAGAGTGCGCAAACATCCACAGTACATGAAAACAACGAAAGAGAATCCAATTATTTCAAAAGCATATGAACGTTTAAAGTCGGGGGAATCTCTAAAAAGTATATCACAAGATCTATTTATACCCATGTCCACGTTGCATCGGCACAAAGTACGTTTATCGCAAACTGGCCAACTGCCCGACTTTGTCACATGCAAAAAACGCGACAGCATGTCCAAAGATGATTTGAAAATTAAACTTGCAAAAGCTGTACATGCATGTGTTCATGAAGGCATGTCGCAAAATCATGCTGCAAATCTCTACGAAATCTCCAAAAGCACTCTATGGCGTCACCTTCAACGACGGGTCGCCGAAGCTGAAGCTGCTGAGACATCGGAGGGTGCCGTAGACGAGTCAATGGGTGAAGAAGAGGAAATCAAAGAAGAAGTTATCCTATCTTAA
- Protein Sequence
- MNHLKWMGHSATILDIHKNLRADLQTCEVTLVAKGHSVKAHRFVLSSCSDLLRTLLSDIPLGQECAIMVPDIKGQLLDNVLAFIYLGECSLSSSNLSEFLEAINVLGIKSAISFECNTNALQAAQQHQNQGNNNEVVSSPSTGSLMDGGTMTAVRHVSAGATLPGTSVSMQQEELLENQTVVHADTQTVSTSSNVIAADATSRELEFLDVYHEPQHKITYSIEHVPGSTGGNEFILTENSGTFTLTHHNHKLESNSSAESTNMEVTEDEACESHIIEEYSSGDEPLIHIAEATANVSVPVQTASLATTTSSTAPIIQVKPKLKTIKLKSHSTSTSANIPKIERMNTTIDNSQNTEDPMSMLHSSSTDDGFTLIKVNSANDSLGNTTHESVDFSMNSSGLTAADMAYQAMANEGMSLPKAAVKFNVSKSELWSRVRRTGVENLHKSQKLDPEKLDVIEMASQAVISEGLSLQKAAVRFDISKTVLWRRVRKHPQYMKTTKENPIISKAYERLKSGESLKSISQDLFIPMSTLHRHKVRLSQTGQLPDFVTCKKRDSMSKDDLKIKLAKAVHACVHEGMSQNHAANLYEISKSTLWRHLQRRVAEAEAAETSEGAVDESMGEEEEIKEEVILS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01175259;
- 90% Identity
- iTF_01175259;
- 80% Identity
- iTF_01175259;