Ptie076809.1
Basic Information
- Insect
- Phaonia tiefii
- Gene Symbol
- retn
- Assembly
- GCA_963931995.1
- Location
- OZ008371.1:94054889-94093067[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.1e-26 2.7e-22 81.2 0.0 2 89 24 109 23 109 0.96 2 2 3.7 4.7e+04 -2.9 0.1 11 37 258 289 244 291 0.43
Sequence Information
- Coding Sequence
- ATGAATAACGTATCGACAGATACCCAGGTACCACACTGGAAGTTGTACGAGATCAATGATGACCCCAAACGCAAGGAGTTCCTCGATGATCTATTTTCGTTTATGCAAAAACGAGGCACTCCCATCAACCGCTTACCTATTATGGCAAAATCGGTATTGGATCTTTATGAGTTGTACAATTTGGTAATTGCTCGTGGTGGACTCGTGGATGTTATCAACAAAAAGTTGTGGCAGGAAATTATCAAGGGACTGCATCTGCCGTCGAGTATAACAAGTGCTGCATTTACACTTAGGACACAATATATGAAGTATTTGTATCCCTACGAATGTGAAAAGAAGAACCTTAGTACACCGGCTGAATTGCAGGCAGCGATTGATGGCAACCGTCGTGAGGGACGTCGTTCCAGTTATGGTCAATATGAGGCAATGCACAATCAAATGCAAATGCCTACAATGGCACGACAGAGTTTGCCAGGTGGAATGCAACAAATGTCCCCATTGGCCTTGGTTACACATGCTGCGGCAGCAAATAACCAGCAAGCACAGGCGGCAGCTGCGGCCGCAGCCGCTCATCACAGACTGATGGCACCGACATTCGGACAAGTGCCAAATTTAGTGACCCATGAGATAGAGCAGCGGATGATCGAGTACTTGAAGTTGATTCAAGTCAAAAAGGAGCAGAATGTAATGACCAACGGCGGGAGTGGTATGGGTTTGTCACCACATCACCAACATCAGCAActgcaacatcaacaacaacagcagcagcaacaacagcaccgGCAGCGTTCTCAGAGTCCCGAAATAAGTCCCAGGGAGGCCTTGAATGCCCTGGAAATGTCGCGTGTTGCATTGTGGCAAATGTATCACAACAACACTAGCCCTCCCGCGTCGGTTAATGCATCCCCACAAGGTGGCGCTGCCAGCGGTACTGGTGGAAATTTATCTGCCAGTTCGGAAACTCAGCGTAGCGAAGCCTTGAATCTATCGGATTCACCGCCTGTCGTCGCTGCCATAAAACGGGAGCGTGAGCTTGAACCCAGCGCGGAAATTAATGACCGTGATGATTTTCACCATCAGCCACCTCCAGCAAAACGTGTTGGTTTTCCAACGAATTTTTACCTGCCACCAGGCATGAGCAGTATGGCGGCTGCGGCCGCAGCTGTAAATTTCCACTATAAAGGAGACCACCACGATTCCGACTGCGATGAAGATAACGAGGACGATGGCGATCACAACATCACAGCAAACTCTTCGCACGACGATCCCACAGAACGGCAGCAACTAAATGGTGCGAGTGTTCGGCCTGCTCACCATGACAGCAATACCAGTGTGCACAACGACAAATCCGACGATTCCGCGATAGAAAATTCCCCTTCTACGTCGGGCGCATCAGGTGGAAATGGTCAAATCTCACCCGTGTCAACAAAAAAGATACATTTATCCAAACAGCATCACGTACAACAACAATCGGCGAACGCGAATGCAGACGGCAGCAGTGCTAACTCTATGGAAACAGTCGGTTCGTCTTTGGGTGCTTTGGAGACATTGAACCTGCTTTCAGGCATGCAATTCCGTGTGACTCGCAATGGGACGAACGCAAATGGTGAGCAACAGTTGCTAGTTAACCTTGAATTAAATGGCATTAAATACTCCGGGGTCCTTATTGCCAATACTAGCTGTAATGTAACGACGGAAGTAGAATCAATTGACAATGCAATAGATAACAACGCTGCAACCACCAGCCATAGCAATGAGGACAACAATATCAGCTTTTGTCCCCGAAATGTGAAAGCCATTCCCAGTTCCGTTTCGCACTACAACGATGCACCAAAGGACGTAGATGCTGCTTCCGATATAGTACCGGTTATCAGAGAACGGGCAGTGTGTGATGCCGATGCGCTACCAAGGACGAAGGTCTCACTCACAAATCCTGGTGCTGCGAATGGCTCCATACCCACTGCCCTAAAGGACGCACTAATAACGTCATAG
- Protein Sequence
- MNNVSTDTQVPHWKLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMQMPTMARQSLPGGMQQMSPLALVTHAAAANNQQAQAAAAAAAAHHRLMAPTFGQVPNLVTHEIEQRMIEYLKLIQVKKEQNVMTNGGSGMGLSPHHQHQQLQHQQQQQQQQQHRQRSQSPEISPREALNALEMSRVALWQMYHNNTSPPASVNASPQGGAASGTGGNLSASSETQRSEALNLSDSPPVVAAIKRERELEPSAEINDRDDFHHQPPPAKRVGFPTNFYLPPGMSSMAAAAAAVNFHYKGDHHDSDCDEDNEDDGDHNITANSSHDDPTERQQLNGASVRPAHHDSNTSVHNDKSDDSAIENSPSTSGASGGNGQISPVSTKKIHLSKQHHVQQQSANANADGSSANSMETVGSSLGALETLNLLSGMQFRVTRNGTNANGEQQLLVNLELNGIKYSGVLIANTSCNVTTEVESIDNAIDNNAATTSHSNEDNNISFCPRNVKAIPSSVSHYNDAPKDVDAASDIVPVIRERAVCDADALPRTKVSLTNPGAANGSIPTALKDALITS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -