Basic Information

Insect: Phania funesta
Gene Symbol: -
Assembly: GCA_963932375.1
Location: OZ010653.1:114354537-114356722[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 3.9e-05 0.0036 18.5 2.8 1 23 8 31 8 31 0.96

2 14 4.8e-06 0.00044 21.3 1.6 1 23 37 60 37 60 0.92

3 14 0.0012 0.11 13.8 0.9 2 23 68 90 67 90 0.96

4 14 2.7e-05 0.0025 19.0 2.1 1 23 185 207 185 207 0.98

5 14 0.13 12 7.4 3.8 2 23 214 235 213 235 0.87

6 14 0.13 12 7.3 1.5 1 21 248 268 248 269 0.92

7 14 0.0025 0.23 12.8 2.8 1 20 277 296 277 297 0.96

8 14 0.82 76 4.8 0.3 2 23 330 351 329 351 0.95

9 14 0.0074 0.68 11.3 4.1 3 23 359 379 358 379 0.96

10 14 0.0058 0.54 11.6 9.6 1 23 385 407 385 407 0.98

11 14 0.00011 0.01 17.0 4.4 1 23 470 493 470 493 0.96

12 14 0.021 1.9 9.8 2.8 1 23 499 521 499 521 0.98

13 14 3.4e-05 0.0032 18.6 1.1 1 23 528 550 528 550 0.97

14 14 0.00029 0.026 15.7 4.3 1 23 556 579 556 579 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	3.9e-05	0.0036	18.5	2.8	1	23	8	31	8	31	0.96
2	14	4.8e-06	0.00044	21.3	1.6	1	23	37	60	37	60	0.92
3	14	0.0012	0.11	13.8	0.9	2	23	68	90	67	90	0.96
4	14	2.7e-05	0.0025	19.0	2.1	1	23	185	207	185	207	0.98
5	14	0.13	12	7.4	3.8	2	23	214	235	213	235	0.87
6	14	0.13	12	7.3	1.5	1	21	248	268	248	269	0.92
7	14	0.0025	0.23	12.8	2.8	1	20	277	296	277	297	0.96
8	14	0.82	76	4.8	0.3	2	23	330	351	329	351	0.95
9	14	0.0074	0.68	11.3	4.1	3	23	359	379	358	379	0.96
10	14	0.0058	0.54	11.6	9.6	1	23	385	407	385	407	0.98
11	14	0.00011	0.01	17.0	4.4	1	23	470	493	470	493	0.96
12	14	0.021	1.9	9.8	2.8	1	23	499	521	499	521	0.98
13	14	3.4e-05	0.0032	18.6	1.1	1	23	528	550	528	550	0.97
14	14	0.00029	0.026	15.7	4.3	1	23	556	579	556	579	0.97

Sequence Information

Coding Sequence: atGGGAAGCGATGCTCCAAGCTATATCTGTAAgttgtgtaataaatttttttcccaaaaatcttCGCGTAATCGACATGTTAGGGAACAACACATTCAATCTGGTTTATACCCTTGCAAGCAATGTGGACAAAgATTTTCAAAGAAGTACAATCTTCAAGTACATATAGGACATGTACATTCGAGAAGTCTTAACAAAGTTAAATGTTCTTTTTGCAAGGGATTTTTTACGAATTTAGCAACCTTAAAAAGACATATCAGTGTCCAGCATAAAAGTTGTGTAACAAATGATTCTTCAAGCACTGCATTAGTCCTAAAAGAGACGGACGCAGAGACTTTAGCGGAGTCTGTATTAAAAGAActtaaacaattacaaaaagaaatacagCCATTAGGGGAGACTGATATCACGAATACGAATAAAGACCAAGAACTTGTTGATATTAATAAAGAAACAGTCAAAATTATCActattaaagataatttatatCCTTTGGGTCATTTCACTTTAATAAAAGCTCAGACCGTCAAACGTGTGGAtggagtaaaatattttatatgcgaATTTTGTGGAAAAGAATTTAACAAGACATATAACTATTTAAGACACCGCCGAATTCATACTAAAGTGCGGCCCTTTATATGCATTTTATGCAAGAAATGTTTTCCCACTACGGCACAGTTAAAAGCGCATTGCTCTACACACAAACTGCATGAAAAATTTggattgttttataatttgtataattgtCCCAAATGCAATGAAGGTTTCTGTGCAGTGCGAGAATTAGATAATCATCTGTGctCATCTTCTTGCAGTAATGTTCTTTTCAAGTGTCCACAGTgtttaaaatcttataaaacTCTGAAAACGCTATTACGCCATAAGCACTTTGAAAAAGATAAGGAGTTAGAAATgcttaagaaaatattaccaACATCTTTTGGCGTTAAAACTAAACTTTCGAAAGATAAAGAAACTTATCTAGAATGTAATTTTTGTGGAATGCAAGTAAATGGAGAAATTGTATTAAAGCAACACAAAAAGCGGCAtgaaaatttattccaaaatcaTTGTACTAAATGTCAATGTTCATTTGTAACGCAGACGGCTTTAAAAATTCACGCTAAAGCTCATTTAAGTAGTAGAAACTTCAAATGTCAATATTGTAACAAATGCTTTAAAACAGATCAAAATTGTCGGAGACATATGCTAAACCATTTAAAGCTTTTGCTTAATACGAACCCATCATTACAAGATACAAATGAAACATTAGCCGTATATCCAACTTTTATAGAAAACGAGAAAAATGATCAAACAGAAACCACGGCAACatgtataataaaatcaattaaaaagtgtaaaacaCAACGAAAAGAGAAAAGCTTTGCCCTCAACCAACTTAAATTCAAATGTTCCAGATGTGAAAAGTCATTTCGCTATAAGGCTTggctaaaaaaacattttaaatattcacacaCTGACGACTTCGCCTTTGAATGCAACATTTGCATGCGAAAACTTCGCACTAAACAATGTTTACAAAGCCATTTATTAGTGCATTCGACTGAACGCGTTAAGCACATCTGTCAAGTATGTGGTAGACAATATGCCTCCAGTAAGTCCTTAAAACTGCACTTAAGAATACACACACAAGAGAAACCGTTTAACTGTGATAAATGTTCTAAGCTATTTCGTACTTCTGGTCACCTAATACAGCATCGAAAATCAAAACATAaggaataa
Protein Sequence: MGSDAPSYICKLCNKFFSQKSSRNRHVREQHIQSGLYPCKQCGQRFSKKYNLQVHIGHVHSRSLNKVKCSFCKGFFTNLATLKRHISVQHKSCVTNDSSSTALVLKETDAETLAESVLKELKQLQKEIQPLGETDITNTNKDQELVDINKETVKIITIKDNLYPLGHFTLIKAQTVKRVDGVKYFICEFCGKEFNKTYNYLRHRRIHTKVRPFICILCKKCFPTTAQLKAHCSTHKLHEKFGLFYNLYNCPKCNEGFCAVRELDNHLCSSSCSNVLFKCPQCLKSYKTLKTLLRHKHFEKDKELEMLKKILPTSFGVKTKLSKDKETYLECNFCGMQVNGEIVLKQHKKRHENLFQNHCTKCQCSFVTQTALKIHAKAHLSSRNFKCQYCNKCFKTDQNCRRHMLNHLKLLLNTNPSLQDTNETLAVYPTFIENEKNDQTETTATCIIKSIKKCKTQRKEKSFALNQLKFKCSRCEKSFRYKAWLKKHFKYSHTDDFAFECNICMRKLRTKQCLQSHLLVHSTERVKHICQVCGRQYASSKSLKLHLRIHTQEKPFNCDKCSKLFRTSGHLIQHRKSKHKE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -