Basic Information

Insect: Phania funesta
Gene Symbol: -
Assembly: GCA_963932375.1
Location: OZ010655.1:3317170-3319889[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.00012 0.011 17.0 2.1 2 23 206 228 205 232 0.97

2 14 0.017 1.6 10.1 4.7 1 23 234 256 234 256 0.91

3 14 4e-05 0.0036 18.4 4.0 1 20 262 281 262 284 0.94

4 14 0.00011 0.0099 17.1 2.1 1 23 290 312 290 312 0.96

5 14 0.00088 0.081 14.2 4.2 1 23 318 340 318 340 0.99

6 14 9.2e-05 0.0084 17.3 4.8 1 23 361 383 361 383 0.99

7 14 0.016 1.5 10.2 7.1 1 21 389 409 389 412 0.95

8 14 0.00016 0.015 16.5 1.2 2 23 505 527 504 527 0.95

9 14 7.7e-05 0.007 17.5 1.2 1 23 533 555 533 555 0.99

10 14 1.9e-06 0.00018 22.6 1.7 3 23 579 599 577 599 0.96

11 14 0.0049 0.45 11.8 1.6 1 23 605 627 605 627 0.98

12 14 0.0001 0.0095 17.1 0.2 1 23 632 654 632 654 0.99

13 14 0.00028 0.026 15.8 3.8 1 23 660 682 660 682 0.97

14 14 0.00012 0.011 16.9 4.4 1 23 688 711 688 711 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.00012	0.011	17.0	2.1	2	23	206	228	205	232	0.97
2	14	0.017	1.6	10.1	4.7	1	23	234	256	234	256	0.91
3	14	4e-05	0.0036	18.4	4.0	1	20	262	281	262	284	0.94
4	14	0.00011	0.0099	17.1	2.1	1	23	290	312	290	312	0.96
5	14	0.00088	0.081	14.2	4.2	1	23	318	340	318	340	0.99
6	14	9.2e-05	0.0084	17.3	4.8	1	23	361	383	361	383	0.99
7	14	0.016	1.5	10.2	7.1	1	21	389	409	389	412	0.95
8	14	0.00016	0.015	16.5	1.2	2	23	505	527	504	527	0.95
9	14	7.7e-05	0.007	17.5	1.2	1	23	533	555	533	555	0.99
10	14	1.9e-06	0.00018	22.6	1.7	3	23	579	599	577	599	0.96
11	14	0.0049	0.45	11.8	1.6	1	23	605	627	605	627	0.98
12	14	0.0001	0.0095	17.1	0.2	1	23	632	654	632	654	0.99
13	14	0.00028	0.026	15.8	3.8	1	23	660	682	660	682	0.97
14	14	0.00012	0.011	16.9	4.4	1	23	688	711	688	711	0.98

Sequence Information

Coding Sequence: ATGGACACTCAAATATGTTTAACGTGCCTTTGTAAACCTAACAAGGCTCACAGTGTTAATGAAATTCCcttggaaaatgttaaaatcttCGATATGATTGTTCAATTAGTACCTTTATTTTTGGAACAACATGTTCCTACACTTCCTGATAGAATATGTGCTGAGTGTTTAAAAAGTCTTTTAATATCgtataaatttcaaaagcaaTGCTTGGATTCTgtacaaattttacacaaactATTTccgaaaaatttcttaaacataGAGGGCCAACAAAAAGTATCTCAGCCAAAGTTGGAAGCTGAGGATGTGGAATATGAAACAAACGAATATAAAAGTAATGATGAAAACACAATAGAATCACTACCTGTCATTAAGGATGCTATCAAAATGCCAGCACAGGAACTTGCAATTCATTCGTTGATAGTAAATAAAGATATAGATACAgaagtttcatttaaacaagATGGGGAAAATggagaaaatcatttaaagcAAAAGAATGATGCCGAAggtacattaaatattaaattacaatgtaACGACAATAGTAACAAAAACTTACACGGAACAACGGATGGTGATGATGTTGAAGAGATATCAGTTGCCAAAATTCAATGTACActgtgcaataaaatatttaaacaatccCAAGGTTTAGCTTCGCATATGTCtaaaacacatttgaaaaagcATTTATATCAATGCCAAAAATGTGATAAAGGGTTTAGTGTAGAAGAACTCTTCATAAGACACTGTCATCGCCATTTAGGCATCAAACCTTTTCCCTGCACCCATTGTGATAAAGCTTTTGATACTAAGAGTAGCTTAAATCAACATTTACTTTGCCATTCCAAAGATTCCTCTTATTTGTGTACAATTTGTGGCAAAAAATTCCACCGCATTGATGTTTTAAAGCAGCACATGCTACGCCATGATGACGAGAAACTATTTCAATGTTCAAAATGTGATATAACCTTTAAGTCTTTCTCTGACCATATAAAACACATAAAGACACATAAAGCTGATAAACGTTTGTCCACATCCAATCAGAAAATTGTACATACTGACAAGAAATCCTTTAAATGTGGTCAATGTCATAAAGAGTTTATTTCTTCAACCACTTTCAAAATCCACCAAAAAACACATACCAGCGAAAAACATTTTCGATGTCAATTTTGTTCGAAAGCTTTTGGTCACAGCAATGATCTCAAGAAACATACTAGATGCTTCCATAATGACAAAAATTGTGAACTTGAGGATGAAATAACCATGGATTGtctaattggaaataaaaaagatctaaaaatgtcatttgaacaaattttaccagAATCTGTACCTAATAATAAAGAgggtttaattgaaaatattgaagatGTGGAAAGAGTCAATGTAAAAGTGGAAGAAGCTGAAAATGAaaataaaaaggaaacaacaGTACACCCGAAAACCCCCTTAGATAACATTAAAGAGCAGGAATCTATGTCATTAGCATCAACAGACTCAACTCAATGTGACCTATGTAATCAAACATTTAAGAATTCCCAAGGATTAGCTAGACATAGGTCTAGCACacattttaaaaagcatttataCCAGTGCGATAAATGTGATCGAGGTTTTAGTGTAGAAGAATACTACATAAAACATCGTAATCGTCATTTagCTTTTGAAACTAATAGCATCTTGAACCAACATTTAATTTCTCACTCTAAATTAACGCCACATTTATGTACAATCTGTGGCAAAAGTTTTCGTCGCATTGATGGTTTGAGACAGCATATGCTGCGGCACGGAAACGAAAGGCCATTCCAATGTGCAGTATGTCCTAAAAGCTTTAAGTGTCTCTctgataaattaaaacatatgatCATACATGATGGAAAACGTTACGAGTGTAATATTTGTGGTTCACGCTTAGCCACATCCGAATCACTATCGCAACACCAAATGACACATACGGGTGAGAAACCTTTTAAATGCAGTTATTGTGATAAGagCTTTATCTCACTTTCTAATATGCGATGTCATGAAAGAATACATACTGGCGAAAAACCCTATAAATGCCAATATTGCTGGAAAACTTTTCGCCAGAGTAACGATCGTAAGAAACATACAAACCGTATGCATAAGAATGAAACGGCTAATAGGAAATCCGAGCAAATTCAGAAAACCCAAGAACAAAACGTATAA
Protein Sequence: MDTQICLTCLCKPNKAHSVNEIPLENVKIFDMIVQLVPLFLEQHVPTLPDRICAECLKSLLISYKFQKQCLDSVQILHKLFPKNFLNIEGQQKVSQPKLEAEDVEYETNEYKSNDENTIESLPVIKDAIKMPAQELAIHSLIVNKDIDTEVSFKQDGENGENHLKQKNDAEGTLNIKLQCNDNSNKNLHGTTDGDDVEEISVAKIQCTLCNKIFKQSQGLASHMSKTHLKKHLYQCQKCDKGFSVEELFIRHCHRHLGIKPFPCTHCDKAFDTKSSLNQHLLCHSKDSSYLCTICGKKFHRIDVLKQHMLRHDDEKLFQCSKCDITFKSFSDHIKHIKTHKADKRLSTSNQKIVHTDKKSFKCGQCHKEFISSTTFKIHQKTHTSEKHFRCQFCSKAFGHSNDLKKHTRCFHNDKNCELEDEITMDCLIGNKKDLKMSFEQILPESVPNNKEGLIENIEDVERVNVKVEEAENENKKETTVHPKTPLDNIKEQESMSLASTDSTQCDLCNQTFKNSQGLARHRSSTHFKKHLYQCDKCDRGFSVEEYYIKHRNRHLAFETNSILNQHLISHSKLTPHLCTICGKSFRRIDGLRQHMLRHGNERPFQCAVCPKSFKCLSDKLKHMIIHDGKRYECNICGSRLATSESLSQHQMTHTGEKPFKCSYCDKSFISLSNMRCHERIHTGEKPYKCQYCWKTFRQSNDRKKHTNRMHKNETANRKSEQIQKTQEQNV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -