Basic Information

Insect: Phania funesta
Gene Symbol: -
Assembly: GCA_963932375.1
Location: OZ010655.1:12630623-12639872[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 3.3e-06 0.0003 21.8 2.8 1 23 12 34 12 34 0.99

2 15 3.3e-05 0.003 18.7 0.8 1 23 40 62 40 62 0.93

3 15 2.9e-05 0.0027 18.8 0.1 1 23 68 90 68 90 0.96

4 15 0.00015 0.014 16.6 1.4 1 23 97 119 97 119 0.96

5 15 3.7e-05 0.0034 18.5 1.7 1 23 125 147 125 147 0.97

6 15 2.5e-07 2.3e-05 25.3 5.0 1 23 153 175 153 175 0.99

7 15 0.027 2.4 9.5 0.9 1 23 181 203 181 203 0.98

8 15 0.00083 0.076 14.3 2.0 1 23 350 372 350 372 0.98

9 15 3.2e-06 0.00029 21.9 0.3 1 23 382 404 382 404 0.98

10 15 9.6e-06 0.00088 20.4 1.6 1 23 410 432 410 432 0.92

11 15 1.5e-06 0.00014 22.9 0.1 1 23 438 460 438 460 0.97

12 15 7.3e-05 0.0067 17.6 1.1 1 23 467 489 467 489 0.96

13 15 5.2e-07 4.8e-05 24.3 2.0 1 23 495 517 495 517 0.98

14 15 3.6e-07 3.3e-05 24.8 3.7 1 23 523 545 523 545 0.99

15 15 0.064 5.8 8.3 0.3 1 23 551 573 551 573 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	3.3e-06	0.0003	21.8	2.8	1	23	12	34	12	34	0.99
2	15	3.3e-05	0.003	18.7	0.8	1	23	40	62	40	62	0.93
3	15	2.9e-05	0.0027	18.8	0.1	1	23	68	90	68	90	0.96
4	15	0.00015	0.014	16.6	1.4	1	23	97	119	97	119	0.96
5	15	3.7e-05	0.0034	18.5	1.7	1	23	125	147	125	147	0.97
6	15	2.5e-07	2.3e-05	25.3	5.0	1	23	153	175	153	175	0.99
7	15	0.027	2.4	9.5	0.9	1	23	181	203	181	203	0.98
8	15	0.00083	0.076	14.3	2.0	1	23	350	372	350	372	0.98
9	15	3.2e-06	0.00029	21.9	0.3	1	23	382	404	382	404	0.98
10	15	9.6e-06	0.00088	20.4	1.6	1	23	410	432	410	432	0.92
11	15	1.5e-06	0.00014	22.9	0.1	1	23	438	460	438	460	0.97
12	15	7.3e-05	0.0067	17.6	1.1	1	23	467	489	467	489	0.96
13	15	5.2e-07	4.8e-05	24.3	2.0	1	23	495	517	495	517	0.98
14	15	3.6e-07	3.3e-05	24.8	3.7	1	23	523	545	523	545	0.99
15	15	0.064	5.8	8.3	0.3	1	23	551	573	551	573	0.95

Sequence Information

Coding Sequence: ATGCACGATAAAAGAGACAATGGAGAACGAACATATGAATGTAACATTTGCAATAAAGGGTTTCATTATAGTTCCCTATTAAAGGAGCACCAACGTTCGCATGTTGgCGAACGACCATATTTGTGTTCTGTGTGTGGCAAAGGATTCTCGTCGTCGGGAAGTCTAAAACAACATTCATTTCGTCATCTAGAAGAGAGGCAGTTTCCGTGCCCCGATTGTCCGAGATCTTTTCCTACTAAAACCGATATGCTCTCCCATTATGATATTCATAAGGCTAAGCCAAGAAATCACATTTGTGATGTTTGTGGTCGTGGATTCTACAAGCCTTATTTGTTGAAACAACACAAAATGTATCACAACAATGAGCGACCATTTGCTTgtgaattttgtaataaacgCTTTGTCACAAGTGAAAAAGTGAAACGTCATACCCGCATTCACACCGGCGAAAAACCCTACAAATGCAACTATTGTGAAAAATCATATTGCCAATCAAGTGAATTAATGAAACATTTGCGAACCCATTTGGGTGACAATATCTATCAATGCGAATTATGCCCACATAAATTACCAACGGTAAAACTTTTGCGCAGCCATTTTGCAACGCATAAAAATGATGATGAAGACACAAAAGCTCGAAACTTATACGCTCTGAATGCTTTAGAAATGAAGggaatGAAAGGTCAACCTCCTCTTCACATTACCGATGAAAACTGGACTCTAAATTATTTGCGCTGTGCAATTCGTGACCCGCTTAATGCTGAAGAAGCCATGTTAATACCCAATTCACCCAAGTGGAAGACTGCAATGCCCAAGAACAAAGACTTTAATGAAAACTTTGCTCCAGTCGTGAAATACAAATCCATCagaaAAGCTCAAGCAAATGACAAATCTACGAATCATAAAAGAGAAGAACTTGATGACGAAGTTTTTGAATCAGTCGGATATGAAGATGATGAAGATGTTAAAGATGATGGTGGTGACGACGAGGACTCTGAAGgtttaaacacaaaaacagtacataaaaatattactgtGGAAAAGCTTTATCCCTGCGACagatgtaaaagaaaattaaaatcgaaaccgtctttagaaaaacataaaaaaatgcatGCAAGACGTGATCATGAAGAACCAAAATTTGTGTGCAATATTTGCGAAagaggTTTTTCACAAGGCTACAATCTTAAAGACCATCTACGTATACATAGTGGTGAAAGACCATTTTTGTGTTCAGAATGTGGTAAATCATTCACATCGTCTGGCAGTTTAAAACAGCATTCGTTCCGCCATCTAAATGAAAGACAATTTCCCTGTCCGGACTGCCCTAAGTCGTTTCCAACCAAAACTGATTTGGCTTCTCATTATGATGTTCATAAAGCAAGACCCAGAACGCATATTTGTGATATTTGTGGCCGTGGTTTTCCAAAACCATTTCTtctgaaaaaacataaaatgtatcACACTAACGATCGACCGTTTTCTTGTGAATATTGTAATAAACGTTTTATAACTAATGAGAAACTAAAACGTCATGTAAGAATTCACACTGGGGAAAAGCCATATAAATGCAATTATTGTGAAAAGGCTTTCTGTCAATCGAATGAGTTAACTAAACATTTACGAGTTCATTTAGGTGGAAATGTATATCAATGCGAATTGTGCCCTCTGAGATTTCCAACAGTTAAAGTAGTTCGTGAGCACTTTTCTACGCATAAAAACGATGATGAGGAaactaaaattcgaaatttggcGGAGCTTAATGCAATGGcattaaaaggaatttattgtagataa
Protein Sequence: MHDKRDNGERTYECNICNKGFHYSSLLKEHQRSHVGERPYLCSVCGKGFSSSGSLKQHSFRHLEERQFPCPDCPRSFPTKTDMLSHYDIHKAKPRNHICDVCGRGFYKPYLLKQHKMYHNNERPFACEFCNKRFVTSEKVKRHTRIHTGEKPYKCNYCEKSYCQSSELMKHLRTHLGDNIYQCELCPHKLPTVKLLRSHFATHKNDDEDTKARNLYALNALEMKGMKGQPPLHITDENWTLNYLRCAIRDPLNAEEAMLIPNSPKWKTAMPKNKDFNENFAPVVKYKSIRKAQANDKSTNHKREELDDEVFESVGYEDDEDVKDDGGDDEDSEGLNTKTVHKNITVEKLYPCDRCKRKLKSKPSLEKHKKMHARRDHEEPKFVCNICERGFSQGYNLKDHLRIHSGERPFLCSECGKSFTSSGSLKQHSFRHLNERQFPCPDCPKSFPTKTDLASHYDVHKARPRTHICDICGRGFPKPFLLKKHKMYHTNDRPFSCEYCNKRFITNEKLKRHVRIHTGEKPYKCNYCEKAFCQSNELTKHLRVHLGGNVYQCELCPLRFPTVKVVREHFSTHKNDDEETKIRNLAELNAMALKGIYCR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -