Pfun014757.2
Basic Information
- Insect
- Phania funesta
- Gene Symbol
- lola
- Assembly
- GCA_963932375.1
- Location
- OZ010654.1:25505335-25509098[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.5e-12 2.1e-08 34.5 0.0 4 45 468 509 465 509 0.91 2 2 4.1 9.3e+03 -2.8 0.9 4 20 605 620 605 620 0.86
Sequence Information
- Coding Sequence
- ATGGTTGTAATGTACCGCCGTCAGCCGGCTGTTAAGCTGGCTCTCAAAGTACGCAAACAATTTGCACATCAAGCTTTTGGTAACTTTTCACCAGAAGATTTTCAGTATCCCATTAACCGGGCACAAAGTCCTATCTCTTCACAACCCAATATGGGTGGGCCACCAGCCACCACGTCCGCGAATGGCCCTCCAGAGGGCCAAACCTATTGCTTACGCTGGAATAATCATAGATCAAATTTAGTGGAAATATTAGATAGTCTCATTAAAGTCGAAAGCTATGTAGACTGTACCATAGTGGTAGATGATCAAGTACAATTCAAAGCTCATCGTGTAGTTCTGGCTGCCAATTCTCCGTATTTCCAATCAATCTTGCAGGACTTGCCTATGGATCATTGCAGTATTATATTTCCAGGTGTAAAAGCCTTTGAGATGCGTGCTTTGTTGGAGTATATGTATACGGGAGAAGTAAATGTCACGCAAAGTCAAATACCGAAAATAATGCGTATAGCTGAGGAATTGGAGGTAAAAGGTCTATTCGATATGGCtgacttaaaagaaaaatttaacaaattaactgAAGAACATGCTGAAATATCAGCGAGTAATCCTTATGCTAATACCACAGCACCCTCAAATCCATATTCCTCTGTTACCACCACCTCCTCACCCCTAACATCCACACCGAATCAGAAACCCAGCTCTAAGAATTCGGATAGCTTTCGCAACGATTCCTCCTATGTAATTTCTACCTCATCGAATATTTCACCTTCAGCTGCGCCCTCTAGCAGTTCGTCACCACCCTATAGTAATTACAAATCACCTTATTCGAGTTTATATACTACATCACCAGGCCCCAATATCAATCAATCCTTATCGGCTCAGCCTCAGTCCAGCCAACAAGCTTCCAGCAACCTTGCACCCACCAATGAACGTTCAGCTCAATGGCCTTTATCACCTTCGGCTGCCGCAGCTGCTGCCATGTTGAGTTCTGTTTATGAATCCGCTCCCGATATGAATCCCTTGAAACGCAAAAAGCTCTCCTCCATATCGAGTATGTTGATGAATCGTGATACTCCAATATTGCGCAACGTCTTAGCCCAAGCCAATCCTGCTGATTCTTCACAACAACTGCCACTTATTTTACCTAATGCAGTAAACAACTGCAAGGTGGATAAATCTTCAAATTTGGAAAAGAACTTAAGTGGTCAGAACAACAATCACAGTTTTAACGGTTCAGATTACAGTGATAAGaaataccATGATGAGCCACATTCTCCTTTTACCGATCGTTCCTTTGAAGATGATGGTTTTGATCCTAAGGGTAGCAATTTTGGAGGCAATTTCGGCAACAATGCCAACCAGAAACCAGAGTGGAAACGTTACAAACAATACACTCGCAGTGATATCATGTCTGCCATACAATGTGTACGTGAAGGCATGAGTGCTTTGCAAGCTTCTCGCAAATTCGGTGTGCCTTCACGTACTCTCTACGATAAAGTTAAAAAGCTGGGCATAACCACTGGCCGTCCTATGAACCGTACAATAAAACGTAGCCCCAGCAATGTAGAATCATCTGCTGCCTTCCCCTATGCTCATGGTTATGGTCAAGCTTCGGCTGCTGCTGTTATGCACGAAGCCGCTGCTCGTGAGGATCGTGAATTAAAAGATCATCACCAAAACAACGAGCATCATCACTTACCGCCCAATATTCCTCATCCAGCTGCTGCCTTATTAGACCATGCTTTCCTGCAACAGGCTTTGGAAAATCATGGTGGTGGTGATATAGCTGGACGTGAAGCTCTTCACGCTATGGCTTTAGCAGCTGCTGCTCATGCAGCCGCCAACCGTATGTCTACTAGCCCAGGACCCAATGGCAATGCTGTACGTTCTCCTAGCCCTACAAATTTTGCTTTGAAATATGGTAATTTACGTAATGCCGAGCAGGAGCTAATGGAACGTCATGAATTAGAACGCGCACGTGAGAGGGAACGGGAATATGTAGAGAGGGAAAGAGAGCGCGAAAGGGACATAGAACGTGAAAACGAGGAAGAAGAGGATCATGTCGAAGATTTATCAGTAGCACGCAAAGACAATAATCATTCCATACTAGAAACTAGAGAATTAACCGAACCTCCGTACTCACCGGAAGTGCCGGTCAATAACGAAAATGAGAAATCTGTTATAATGACTACTAAATTACCTTCAAATCCCACTGATACCGCTTTCATCAATGATACCAACATGAAACGTGAGGTGGTAATAGATGATGTCAGAGCAGACTGA
- Protein Sequence
- MVVMYRRQPAVKLALKVRKQFAHQAFGNFSPEDFQYPINRAQSPISSQPNMGGPPATTSANGPPEGQTYCLRWNNHRSNLVEILDSLIKVESYVDCTIVVDDQVQFKAHRVVLAANSPYFQSILQDLPMDHCSIIFPGVKAFEMRALLEYMYTGEVNVTQSQIPKIMRIAEELEVKGLFDMADLKEKFNKLTEEHAEISASNPYANTTAPSNPYSSVTTTSSPLTSTPNQKPSSKNSDSFRNDSSYVISTSSNISPSAAPSSSSSPPYSNYKSPYSSLYTTSPGPNINQSLSAQPQSSQQASSNLAPTNERSAQWPLSPSAAAAAAMLSSVYESAPDMNPLKRKKLSSISSMLMNRDTPILRNVLAQANPADSSQQLPLILPNAVNNCKVDKSSNLEKNLSGQNNNHSFNGSDYSDKKYHDEPHSPFTDRSFEDDGFDPKGSNFGGNFGNNANQKPEWKRYKQYTRSDIMSAIQCVREGMSALQASRKFGVPSRTLYDKVKKLGITTGRPMNRTIKRSPSNVESSAAFPYAHGYGQASAAAVMHEAAAREDRELKDHHQNNEHHHLPPNIPHPAAALLDHAFLQQALENHGGGDIAGREALHAMALAAAAHAAANRMSTSPGPNGNAVRSPSPTNFALKYGNLRNAEQELMERHELERAREREREYVERERERERDIERENEEEEDHVEDLSVARKDNNHSILETRELTEPPYSPEVPVNNENEKSVIMTTKLPSNPTDTAFINDTNMKREVVIDDVRAD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00258994;
- 90% Identity
- iTF_01174365;
- 80% Identity
- iTF_01174365;