Pfun026899.1
Basic Information
- Insect
- Phania funesta
- Gene Symbol
- ttk
- Assembly
- GCA_963932375.1
- Location
- OZ010656.1:72160352-72169468[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.5e-19 7.9e-16 58.3 0.0 2 45 596 640 595 640 0.97 2 2 5.6 1.2e+04 -3.2 0.7 3 11 673 681 673 684 0.82
Sequence Information
- Coding Sequence
- ATGTCAGTCCAACAATTTTGTCTACGCTGGAATAATCATCAACCAAATTTCATCTCGGTCTGCTCCTCTCTACTGCATAATGGCACATTGGTGGATGTTACACTGGCAGCGGAGGGAAGACAGTTACAAGCCCATAAGATTGTCTTATCAGCATGCAGTTCATATTTTCAGACTCTTTTTACAACAAATCCATGCCAACatccaattgttatattaaaagaTGTACAGTATGACGATCTTAAAACAATGGTCGATTTCATGTACTATGGGGAGGTGAATGTGTCCCAAGAGCAATTGCCGCATATACTAAAGACGGCGgaaatgcttaaaataaaagGTCTCGCAGAAATGCCCACCGATCCTGCTAACTTAACGAAATCTGATAGCAAATCATCGAATGATGGTACAGAATTGGTAGGTGGTGGAGGTAATAATGGGCAGTTGGGTGGTGGTAGTGGTGGTGGTGGTAGCGGTGGTGGTAATACGAGTAGCGGCGGTTTGGGTAACAGTAGTGGCGGCGGTAGCGTTAGCGATTCGATATGGGGTAGTACCGAATCACAATttcaacagcaacagcagcaacaacagcagcaacagcagcagcatcaacatcatcaacaattacaacaacaccatcatcaacaacagcagcaacttcAATTACACACACAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGCTGGCGCCTCACCGGCTACCAGGCGAAAACGATTAAGGAAATCCTCAAACAATgGATCTGGTGAACGTACTAATTCCGAAGAACATAATACATCTCTGGATGCTGCCACAGCTGGTGGATTAACATTGTCACAAATGAGTCAGATGTCATTTAGTGGAGCAGCTACAAATAGTGCTCTTAGTGGTTTGGCTGCACACTCCTTGCACACAGCTAAGTTACTTAAAGAAGCCTCTAATAATGACTTGGAAACAAATCCCCAAGATTCAGATAGCTTAGACGATACACATGGACATGTACACATGCAAATCaaaccaGAAGTTGATATGAGCGGAGTACCACAGTCTATGCCATTGGATATATCGGGTCCCACAACACCCTCTGAACATGATGCTCCTAATTCGCAATCCGCACATTCAGGTTTACAATGGACGGTTGTTGAACCAAATTATTCACGCTTTTCGCTGTCatcatgtcccacaaatttaattggaaataccaatcaaaacacaaataccaacaataacaacagctcGAGTAGtgatcaacaacaacaacagcagcagcaccGCCAGCAACAGGAAGCCGTTGCTagccaacagcagcaacaacaacaacacttgcaacaattacaacaatatcAACACCAACAAAACTCTGCATATTCGCCACAAATTATAACGGTCAGTGGTTACACCAATGCAGCAGCAGCTGCTGTAGCAGCGGCCCAAAATTTATCGCCGCCCTCGCCCAGCGATGGCAATATGGTACAATCAGTGTACAGCCAAGGTCCAACGCCTACACAATCACCTGTGGGTAATGCCTCAGGCTCTGGCGGTGGCAGCAACATGTCTGGAGGCAATTCAGCAAATAATGCCAATATTAAACGTAAGCGTTCCGTTAATCCACAAGgtgatgaaaattttattcggGCCCTAGAAGCAGTGCGTTCGGGAGGTATAGGTTTTTGTAAAGCAGCTCGACTCTATGGTGTTAACAATCGCACTTTATGGCTGGAGTATAAAAAACGTGGTTATCCAGTGTCCAGACCCAGTATAAAATCCCGTGTTGTCAAACAAGAACCGAATCTATCACCCTCTCCTACACCACCTGCCACCGCCGCAGATGATACAAATGAGAATTATGATCATATGGCAGCAGCGGTGGCGGCTGCACAAACTGCCGCTCTGAATATGCAAATACCACCAACCTCCGAAACACCGACACCCTCTTTAATGTGTACACCTCATCATGCTGGCACAGCGGGAGGCGCTACTACACATCCCACAATGGGTGTTATGAGTTTCTTGGATAACCGCCACATGGATTTCCCAACCAGTCTGCATTCAATGTCGCGTCAACGTTATATTGACGGCGGTGCGGGCAGTGGGGCAGGTGCGGGCACAATTAATGTTAATCCGACAGCGGCAATGAATTTACAGAGCATTAATTTTAACTCAATATAG
- Protein Sequence
- MSVQQFCLRWNNHQPNFISVCSSLLHNGTLVDVTLAAEGRQLQAHKIVLSACSSYFQTLFTTNPCQHPIVILKDVQYDDLKTMVDFMYYGEVNVSQEQLPHILKTAEMLKIKGLAEMPTDPANLTKSDSKSSNDGTELVGGGGNNGQLGGGSGGGGSGGGNTSSGGLGNSSGGGSVSDSIWGSTESQFQQQQQQQQQQQQQHQHHQQLQQHHHQQQQQLQLHTQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGASPATRRKRLRKSSNNGSGERTNSEEHNTSLDAATAGGLTLSQMSQMSFSGAATNSALSGLAAHSLHTAKLLKEASNNDLETNPQDSDSLDDTHGHVHMQIKPEVDMSGVPQSMPLDISGPTTPSEHDAPNSQSAHSGLQWTVVEPNYSRFSLSSCPTNLIGNTNQNTNTNNNNSSSSDQQQQQQQHRQQQEAVASQQQQQQQHLQQLQQYQHQQNSAYSPQIITVSGYTNAAAAAVAAAQNLSPPSPSDGNMVQSVYSQGPTPTQSPVGNASGSGGGSNMSGGNSANNANIKRKRSVNPQGDENFIRALEAVRSGGIGFCKAARLYGVNNRTLWLEYKKRGYPVSRPSIKSRVVKQEPNLSPSPTPPATAADDTNENYDHMAAAVAAAQTAALNMQIPPTSETPTPSLMCTPHHAGTAGGATTHPTMGVMSFLDNRHMDFPTSLHSMSRQRYIDGGAGSGAGAGTINVNPTAAMNLQSINFNSI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01397556;
- 90% Identity
- iTF_01174355;
- 80% Identity
- iTF_01174355;