Basic Information

Insect: Phania funesta
Gene Symbol: -
Assembly: GCA_963932375.1
Location: OZ010656.1:72142245-72144104[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 9.2e-08 0.00021 21.7 0.0 8 39 400 431 398 435 0.86

2 4 3.3e-14 7.3e-11 42.4 0.0 5 44 451 490 448 491 0.93

3 4 0.016 36 4.9 0.0 27 38 520 531 516 537 0.88

4 4 8.5e-15 1.9e-11 44.2 0.0 4 41 559 596 559 598 0.92

#	of	c-Evalue	i-Evalue	score	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	9.2e-08	0.00021	21.7	8	39	400	431	398	435	0.86
2	4	3.3e-14	7.3e-11	42.4	5	44	451	490	448	491	0.93
3	4	0.016	36	4.9	27	38	520	531	516	537	0.88
4	4	8.5e-15	1.9e-11	44.2	4	41	559	596	559	598	0.92

Sequence Information

Coding Sequence: ATGAATCATTTAAAGTGGATGGGCCATTCGGCCACAATATTAGATATACACAAAAATCTACGAGCCGATTTGAAGAGCTGTGAGGTGACATTGGTAGCCAAGGGACACTGTGTTAAAGCCCATCGTTTTGTTTTATCCTCATGCAGTGACTTGCTGCGTTGTCTTTTATCAGATGTTCCAATTGGGCAAGAATGCTGTGTGATGGTTCCCGACGTTAAGGGTCATTTGTTGGACAATGTTTtggcttttatatatttaggaGAATGTTCTTTATCATCCACAAATTTGTCAGAGTTTTTAGAAGCGATCAATGTGTTAGGAATTAAGAGTGCCATAAGTTTTGAGTGTAATACAAATGCTTTGCAGACAGCACAAAGTAACAGTAATAGCACTATCGCTTTAGATAGCAACACAACAATGGCACCAGTAAGTAATACATTAGGAAACTCTGAGGTAATAGTTGGGAGTTCTGGAGACTCTTTACATCAGgaagaaataattgaaacacAGAATGTAATGCACAGCGAGACTCATACCACAACTGCGAATAGCGTAAATAATTCTGGTGCGActagagaaataaattttttagatgTAGACGTATACCATGAACCTCAACACAAAATTACATATTCCATAGAACATGTACCGGGGTCAACGGCTggtaatgaatttattttaactgaaaacTCTGGCACTTTTACACTAACCCATAGCGGCAAATTGGAACCGACTACATCTCCGGAGGGGTCATCTAACATGGAAGTAACAGAAGATGACGGTTGCGACTCTCATATAATAGAAGAATACAGCAGCGGTGATGAGCCTTTAATTCAAATAGGTGGAACTGGACAACACCAACATAGTATCGCTGTGGCTCAATCAATAACACAACATCAGCAACAGCATACAGCACCAACAGTttcagcaacaacaactgcaacttCGATTATTCATGTGAAACCAAAAATTAAGACCCTCAAGTTGAAGCATCCCCAGGCAGCACAAAGGATCATAACTAAAATGGAAGAACTTCCTGAAGAAACAGGTATCGATGATCCCATATCGATTCTGCAAACATCAAATGAAAGTTTTACCTTGCTTAAAGATGCTTCTATAATGTCCACAGGTAACACTAGTCAAGATGATTCGACAGATTTTTCTATGAACAACTCGGGCTCTTCTGCAACTGAATTGGCATATCAAGCTATGGTTAATGAGGGCATGTCTTTACCAAAGGCTGCTGACAAATTTAATGTTTCCAAAGCGGAACTATGGCGCCGAGTGCGTAGTACCGGAGTTGAACAGATTAATAAATCAGTTAAACTGGACCCTGATAAAATTGATGTTATAGAACTAGCTAGCAAAGCAGTAATTAACGAGGGTTTGTCACTACAAAAGGCCGCCATACGATATGATATATCTAAAACAGTGCTCTGGCGTAGGGTTCGTAAACATCCGCAATATATGAAGACGGCACGAGAAAATCCTATAATAACAAAAGCATATGAACGATTAAAATCTGGCGAATCCCTCAAAAGCATATCGCAAGATTTAGATATACCCATGTCAACTTTGCACCGGCATAAGGTGCGCCTCTCGCAAACTGGCCAGTTGCCAGATTTTGTTACGTGTAAAAAACGTGATAGCATGTCGAAAGATgatcttaaattaaaactttctaaaGCAGTGCATGCCTGCGTACATGAAGGAATGTCGCAAAACCATGCTGCtaatttattccaaatttcTAAAAGCACCTTGTGGCGTCATCTGCAAAAACGTGTAGCTGAAGCTGAGGCAGCTGAGACAGAGTCTATAGGCGATGAAGATGAGATTAAACAGGAAGTCATTATTTAA
Protein Sequence: MNHLKWMGHSATILDIHKNLRADLKSCEVTLVAKGHCVKAHRFVLSSCSDLLRCLLSDVPIGQECCVMVPDVKGHLLDNVLAFIYLGECSLSSTNLSEFLEAINVLGIKSAISFECNTNALQTAQSNSNSTIALDSNTTMAPVSNTLGNSEVIVGSSGDSLHQEEIIETQNVMHSETHTTTANSVNNSGATREINFLDVDVYHEPQHKITYSIEHVPGSTAGNEFILTENSGTFTLTHSGKLEPTTSPEGSSNMEVTEDDGCDSHIIEEYSSGDEPLIQIGGTGQHQHSIAVAQSITQHQQQHTAPTVSATTTATSIIHVKPKIKTLKLKHPQAAQRIITKMEELPEETGIDDPISILQTSNESFTLLKDASIMSTGNTSQDDSTDFSMNNSGSSATELAYQAMVNEGMSLPKAADKFNVSKAELWRRVRSTGVEQINKSVKLDPDKIDVIELASKAVINEGLSLQKAAIRYDISKTVLWRRVRKHPQYMKTARENPIITKAYERLKSGESLKSISQDLDIPMSTLHRHKVRLSQTGQLPDFVTCKKRDSMSKDDLKLKLSKAVHACVHEGMSQNHAANLFQISKSTLWRHLQKRVAEAEAAETESIGDEDEIKQEVII

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00199788;
90% Identity: iTF_01174388;
80% Identity: iTF_01174388;