Basic Information

Gene Symbol
Kdm5
Assembly
GCA_963932375.1
Location
OZ010653.1:115979917-115985345[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.5e-25 6e-22 78.6 0.1 2 89 199 282 198 282 0.95

Sequence Information

Coding Sequence
ATGTCAACGAAGATATCAGCGCCAGCCGACAGTAGTACTACTACCGCAAGTCCAACCGGAAGTTCGTCTATGTCTGCAGCAGCAAATGGTTCCACAACTCCAGCCAGACGTCTTCGCACTAGAACTTCAACTGGTGGTAATGTAAGTGGTAGCGATTCAGCTCAAAAAAAATATGGGCCACTTACTGAAAGAAGTGACTCAATTTCAAATGCGGCCAGCATCACCACAGGAAATGAAGATAAACCAAGTGCaagcaaaaaatatcacaacagTTGTCCCCAACCGCCAACAAGTGCCGGACGAAAAGAAAAGAATCATTTGCAACCACATAGCTCCAGCACATTCAACATGAATAAAACGGAGGAGTTTAACTTTGACACACCGTTGGAGTGTCCAGTATTTCGTCCCACACCCGAAGAATTTAAAAACCCTTTGGCCTATATCAGCAAGATCCGACCGATCGCTGAAAAGTGTGGTATAGCTAAAATTTTGCCACCAGAATCTTGGTCGCCACCCTTTGCGGTAGATGTGgacaaattgaaatttacacCACGCGTTCAACGTCTAAACGAATTGGAAGCCAAAACTCGTGTAAAACTGAACTTTCTTGATCAAACAGCGAAATTTTGGGAACTGCAGGGATCTTCTCTTAAAATCCCTATGGTTGAGCGTAAGGCGTTGGATCTTTACACATTACATCGTATAGTACAGGAGGAAGGCGGTATGGAACAAACAACAAAGGAACGTAAATGGGCTAAAGTGGCAAATCGTATGTCTTACCCCTCTAGCAAAAGTGTTGGTGCCACCCTTAAAGCCCACTATGAAAGGATACTACATCCTTTTGAGGTATATACTTCGGGAAAAGTCTTAGGACAAGGAATTGCTGGGGCGACTGGCACAAATCCAGATGTTAAACTCGAAGATGGCACCGATTACAAGGCCCACGAGATACCAACACGTCAACAAATTGCACCTCCAAACGAGACTAATGCCCGACGTTCCAAAAGATTTGCAAATTCAAGTGCCAGTTGTGGCTTGGGTGTTAATCGTGGCGGTGTAAAGACGGAAACAAAGGAAGACTTTAAGAGAGATTTATTAAGTTGTTTCAATGCCTCTGCAATTGCAGCCGCTAACCGTGCAAATGCTGGTAATGGAATCACCGGCTCCACCCAAAAGAAAGCGCCTGATCCTAATACAGCTGTGGATCCTCTTATGAAGTACATTTGTCACATTTGCAATCGCGGTGACGTTGAAGAATCGATGTTGCTGTGTGATGGCTGCGATGACTCATATCACACCTTTTGTTTGTTGCCACCTCTATCCAGTATACCAAAAGGTGAATGGCTTTGTCCTCGTTGTGTCGTGGAGGAGGTTAGCAAACCAACGGAAGCCTTTGGATTTGAACAGGCTGAACGTGAATACACTTTACAACAATTTGGCCAAATGGCAGATCAATTTAAAATGGACTATTTCCGAAAACCGGTGCATTTGGTGCCTACAGATTTAGTGGAACGAGAGTTCTGGCGTATTGTTTCATCAATTGATGAAGATGTGACTGTAGAATATGGTGCAGATCTTCATACAATGGATCATGGTTCCGGTTTTCCTACCAAAAGTTCACTTTACTTGTTGCCAGGTGATCAGGAATACGCAGAGTCGAGTtggaatttaaacaatttgccTTTGCTAGAAGACTCTATACTGGGTCATATAAATGCGGACATCAGTGGCATGAATGCTCCTTGGATGTATGTGGGTATGTGTTTCGCCGCCTTTTGTTGGCATAACGAAGATCACTGGAGTTATTCTATAAATTATCTACATTGGGGTGAACCGAAAACATGGTACGGTGTGCCCGGAAGCTGTGCTGAACAGTTTGAAGAAACTATGAAGAAAGCAGCTCCTGAATTATTTTCATCTCAGCCAGATCTTCTACATCAACTGGTAACTATAATGAATCCAAACATATTGATGAACAATGGTGTGCCAGTATATCGTACCGACCAAAATGCTGGTGAATTTGTGATAACATTTCCTCGCGCTTATCATGCCGGTTTTAACCAGGGCTACAACTTCGCCGAAGCGGTTAATTTCGCTCCAGCCGATTGGCTTAAGATGGGTCGTGAATGTATAAATCACTATTCGATGTTACGTCGTTTTTGTGTATTCTCCCACGACGAACTCGTCTGCAAAATGGCTCTTGAGCCTGCAAAGCTAACTTTTGGCATAGCTACAGCTTGCTACATCGATATGGCTGAGATGGTAGACTCCGAAAAGAAATTGCGTAAATCTTTACTTGAATGGGGCGTCACAAGAGCAGAACGAAAAGCATTTGAATTGATACAGGACGATGAACGCCACTGCCAAGAGTGTAATACGACGTGTTTCCTTTCGGCTGTTTCTTGCGAGTGCACAAAGACAATTGTTTGCTTACGCCATTACACCGTTTTATGCACGTGTCCACCTGACAAACATACACTCTTGTATCGTTACACACTTGACGAGATGCCACTTATGTTACAAAAACTCAAATCCAAAGCTCAAAGTTTCGAGAGATGGTTGTCACGGTGTCGTGACATCGTTGATGCCAACACTCCCACGTCTGTGACCCTACAAGAGCTTCAGGAGCTGTGTAAAGAGGCCGAAATCAAAAAGTTTCCATCGTCTTTGCTAATTGATCGCCTTAATGCTGCAGTATTGGAAGCAGAAAAATGCGTAACAGTTATTCAACAATTGGGAATTAATAAGGTGCGCACTCGTTCGGATAACAATTTAGAAGCTGCTCAGTACAAACTTACAATGGAGGAACTTGAACTGTTCGTCCAAGAAATTGATAATCTTTGTTGTACCATCGAGGAGGGAGTATCAGTGCGAGAACTTTTAGTTTTGGGCAAACAGTTTGTAGAACGCACTAATGAAATGTTAAAACATAGCTTAGATGCCCTAGAGGAATCGGAATTGGAAGCAATCATCGGAGAAGGCAACTCATTGCGCATTGAGCTTCCTCAAATGCAACAGTTGAATATGCggcttaaacaattaaaatggtACAAACGATCGCAGGGCTTAAGAGCTGCCAGCGCTAAACTTACCTATGatgatgttaaaaatttattgcatgtGGCAGCAGCTGAAATTGCCCCCACTGATCCAATTATAGATTCGGAAATAAGAAAACTGCAAGAAATCGGAGCTTCCATTGAAGCCTGGGAATGTCAagccaataaatattttaactgcaGCACGCAACGCCATGAGCTGGTAGAAATTGAGCAGTTCCTTCAGACAGCTACCGAAATCGAGGGGCAAGTCCCCTCCTATGGTTTGCTTAAGGATGCTCTACGTAAGGCTAAAGATTGGCTACAATCTGTTGAACAACTTCAAGCTAACGACCACTTTCCCTATTGTCATACATTAGAAGCAATTGTTTTGCGTGGTACGAGTATTCCAATTAAACTGGAAGAACTTTTGCGTATGCAAGGTCACTTAAAAAGTGCCCATGATTGGAAAGAGAACACcgaaaaagcatttttaaaaaagactacTTTTTATACTCTTTTAGAGGTCCTTATGCCGCGCGAAGAGTCAGTAATCATAGACTCGGACCTTAAGAAGCCATTCGAGGATGATTTCGTTAAAGAAATGAATCCGGCTCAGATCGTAGACTCGTTTAAAATAGCCGAAGAAAAGGAGCTTCGTGATATGCGGGAACTCCGACGGCAAAACATGTCTAAAAATCCGCTGCGTGATGACTACTGTCTCTGCAAATCATCCTTTCAAGCCGTGATGTATAACTGTCAATTATGCAGAGATTGGTTCCATGAGGAATGTGTACCACCACCACCTCAAATGCATACTAACTGTGTTTCGAATGATGGCATTAAAATCAAGTGGTTGTGTCCTTCTTGTGTTCGTTCAAAAAGACCACGCCTTGAAACAATCCTACCACTGCTGGTTTCCCTACAAACTCTACCCATACGATTGCCCGAAGACGAAGCTCTTCGTTGCCTTGCTGAAAGGGCCATGAATTGGCAGGATCGAGCCAGAAAAGCCCTAACAAGTCCTGACGTCACAGCTGCATTAGAAGTTATTGCCGCAGCGGTTCAGCAAAGGAATAAACAGAAGAAACGCAAGGGAGCTAAAGATATTAGTACAGGTCGCAAGCCTCGTCGCAGCAGTCACCCCAACTCTAAGGACGACGGTTCAGATAATCCTGACTCAGATGATGAAGGTCGCTTACACATTGTTGAGGAACATTTAAGTAACGATGAAGACGAAGATAATGAAGCGAATGCAACGATTGAAAATGCAAACGCCCATAATGGCCTTCagctacaaaaattattgtcgGATAGCGAGACAGACAATCTCGAGGAACTTATGATGGAAGGCGACCTGCTTGAAGTATCGCTTGATGAATCAAAAGAGCTTTGGCGTGTTCTTTCCGCAGTACAACCAGCGCAGCCTTCTGAAGCAGCTGCTCTAGTTGAGCAGCATCAATCAATGATTAAACAGCATAACCAGCAGCTCCCGCAACCACCTTCTAGTGTCAATTCGGCTGCTGAAGACTCTAACGACAGTTTGTTGGTACAAAGTAGTCCCAACAGCACAAGTAATAGCGGCAGCGGAAATGGACGCAGCTCAGCTAATGTTGTCAAAAAACGTAGATCACTCGACCCAACAACGGGGTGTCCTGTACCACGAAAGAAAATTGCTACACCGAACAAACCAAACGCTTCAACTTTACCAAATGCGTCGTCAGCGAAAAAGTCTGCTAGAAAATCTGAAGCAAATAACAAAACAGCCACTGTACCAGATGACAATGCTGAGAACTATATGCCCACTAAACAGTCAAATGGCAGTTCTCAAAACCAGACCAACAGCAATAGCAATGCTGCGTCAGGATCGCAAAAAAAGCACAGAAAGCGTGTTGTTGGAAAcagtaacaacaataatacaaaCGTTTCGGCTAGTCAAAAGAAAAGCTCTCAAAGAGCTCAAATGGCCCAGCAGGAGGACGACGAAGAAGAATGTCGTGCGGAAAACTGCCACAAACCGACGGGCCGTGAAGTTGACTGGGTACAATGTGACGGCGGTTGCAACGAATGGTTTCATATGTACTGTGTCGGCCTCAATCGTAGCCAAATTAAAGCCGATGACGACTACATTTGCATACGTTGCTCTAAGAACGTAACAGTAACCGCAACGGGCGGTAGTAATGCTGGAGCTTCAGCCATGCAgacacaacaaaaatttcgcTCCCAAACGGCACGATAA
Protein Sequence
MSTKISAPADSSTTTASPTGSSSMSAAANGSTTPARRLRTRTSTGGNVSGSDSAQKKYGPLTERSDSISNAASITTGNEDKPSASKKYHNSCPQPPTSAGRKEKNHLQPHSSSTFNMNKTEEFNFDTPLECPVFRPTPEEFKNPLAYISKIRPIAEKCGIAKILPPESWSPPFAVDVDKLKFTPRVQRLNELEAKTRVKLNFLDQTAKFWELQGSSLKIPMVERKALDLYTLHRIVQEEGGMEQTTKERKWAKVANRMSYPSSKSVGATLKAHYERILHPFEVYTSGKVLGQGIAGATGTNPDVKLEDGTDYKAHEIPTRQQIAPPNETNARRSKRFANSSASCGLGVNRGGVKTETKEDFKRDLLSCFNASAIAAANRANAGNGITGSTQKKAPDPNTAVDPLMKYICHICNRGDVEESMLLCDGCDDSYHTFCLLPPLSSIPKGEWLCPRCVVEEVSKPTEAFGFEQAEREYTLQQFGQMADQFKMDYFRKPVHLVPTDLVEREFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKSSLYLLPGDQEYAESSWNLNNLPLLEDSILGHINADISGMNAPWMYVGMCFAAFCWHNEDHWSYSINYLHWGEPKTWYGVPGSCAEQFEETMKKAAPELFSSQPDLLHQLVTIMNPNILMNNGVPVYRTDQNAGEFVITFPRAYHAGFNQGYNFAEAVNFAPADWLKMGRECINHYSMLRRFCVFSHDELVCKMALEPAKLTFGIATACYIDMAEMVDSEKKLRKSLLEWGVTRAERKAFELIQDDERHCQECNTTCFLSAVSCECTKTIVCLRHYTVLCTCPPDKHTLLYRYTLDEMPLMLQKLKSKAQSFERWLSRCRDIVDANTPTSVTLQELQELCKEAEIKKFPSSLLIDRLNAAVLEAEKCVTVIQQLGINKVRTRSDNNLEAAQYKLTMEELELFVQEIDNLCCTIEEGVSVRELLVLGKQFVERTNEMLKHSLDALEESELEAIIGEGNSLRIELPQMQQLNMRLKQLKWYKRSQGLRAASAKLTYDDVKNLLHVAAAEIAPTDPIIDSEIRKLQEIGASIEAWECQANKYFNCSTQRHELVEIEQFLQTATEIEGQVPSYGLLKDALRKAKDWLQSVEQLQANDHFPYCHTLEAIVLRGTSIPIKLEELLRMQGHLKSAHDWKENTEKAFLKKTTFYTLLEVLMPREESVIIDSDLKKPFEDDFVKEMNPAQIVDSFKIAEEKELRDMRELRRQNMSKNPLRDDYCLCKSSFQAVMYNCQLCRDWFHEECVPPPPQMHTNCVSNDGIKIKWLCPSCVRSKRPRLETILPLLVSLQTLPIRLPEDEALRCLAERAMNWQDRARKALTSPDVTAALEVIAAAVQQRNKQKKRKGAKDISTGRKPRRSSHPNSKDDGSDNPDSDDEGRLHIVEEHLSNDEDEDNEANATIENANAHNGLQLQKLLSDSETDNLEELMMEGDLLEVSLDESKELWRVLSAVQPAQPSEAAALVEQHQSMIKQHNQQLPQPPSSVNSAAEDSNDSLLVQSSPNSTSNSGSGNGRSSANVVKKRRSLDPTTGCPVPRKKIATPNKPNASTLPNASSAKKSARKSEANNKTATVPDDNAENYMPTKQSNGSSQNQTNSNSNAASGSQKKHRKRVVGNSNNNNTNVSASQKKSSQRAQMAQQEDDEEECRAENCHKPTGREVDWVQCDGGCNEWFHMYCVGLNRSQIKADDDYICIRCSKNVTVTATGGSNAGASAMQTQQKFRSQTAR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01235504;
90% Identity
iTF_00899304;
80% Identity
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