Pbuc040073.1
Basic Information
- Insect
- Phalera bucephala
- Gene Symbol
- nfxl1
- Assembly
- GCA_905147815.1
- Location
- LR990631.1:1919769-1922240[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 2 5.2e+04 -7.8 5.6 15 19 134 138 133 138 0.81 2 18 0.014 3.8e+02 2.7 0.7 4 10 169 175 168 175 0.97 3 18 3.1e-07 0.0082 17.6 15.5 3 19 186 202 185 202 0.95 4 18 1.3e-06 0.034 15.7 11.9 3 19 239 255 237 255 0.92 5 18 1.7 4.4e+04 -3.9 1.9 6 10 280 284 279 284 0.83 6 18 1.3e-09 3.4e-05 25.2 12.1 1 19 290 308 290 308 0.99 7 18 1.2 3.1e+04 -3.4 0.9 5 10 332 337 332 337 0.93 8 18 1.2e-06 0.03 15.8 18.3 3 19 345 361 344 361 0.93 9 18 2 5.2e+04 -5.3 2.2 5 10 384 389 384 389 0.88 10 18 4.1e-07 0.011 17.3 17.0 1 18 395 412 395 413 0.97 11 18 8e-09 0.00021 22.7 16.9 1 19 422 440 422 440 0.99 12 18 0.0058 1.5e+02 4.0 8.8 9 19 488 498 486 498 0.89 13 18 0.051 1.3e+03 1.0 8.4 3 12 509 518 508 518 0.87 14 18 0.35 9e+03 -1.7 3.6 14 18 547 551 547 552 0.87 15 18 0.11 2.8e+03 -0.0 0.2 7 12 567 572 567 573 0.87 16 18 8.2e-06 0.21 13.1 5.6 1 11 588 598 588 599 0.97 17 18 0.00011 2.8 9.5 13.4 3 18 629 645 628 646 0.87 18 18 1.5e-05 0.38 12.3 13.0 1 18 687 705 687 706 0.90
Sequence Information
- Coding Sequence
- ATGGCTCGGCGATACAGAGACGCGGCTGCCAAACTGCAGCAAAATGTTCAGAAACATTTGAAAGACATGAAAGAACTATCCTCTTCCGAAGACGAAGAACCTTATGAGGCCAGCGTGTTAGAGGGGGTCTTCCAAAGCTATTCGAGAGGCGGCGGAGACACGAAACTACTCAACAGAACCAAGAACCTTCTAGAAGAGGCTATAAGCGGCCGTGCCGTGACGTGTCTCATTTGTATAGGCTCCATTAAAAGAACTGATCCTATTTGGACCTGCGATCATTGCTTCTCGTATTTCCACCTACCCTGTATTCAAAAATGGTCGAACGACAGCATCAGCTTACGTAGCGAGGAAACTCAAGGCCCAATAACAGTCTATAAGCCCCAAAAAATTGAATGGTGCTGTCCGAAATGCCGAAATTCGTATACTAAAGAGCAGATCCCTCGTAAGTATCGCTGTTTCTGTAGTAAAACTGATGATCCGCCGTATCACCCTTGGTTGATACCTCACACTTGTGGAGAGGTGTGTGAAAAGAGGTTGTCAACTGGTGAAAATTGTAAACATCGATGCTTGCTTCTATGTCACCCTGGTCCATGTCCACCGTGCCCACAAACTGTCAATGGCGTATGTTACTGTAAGAACGAACATAAAAGAGTGAGATGCAGTGCTGCTAAATGGTCATGTGGACAGCAGTGTAAAAAGGCATTATTGTGTAGAACacataaatgtgaaaatatttGTCATAAAGATGACTGTCCTCCATGTAGTTATACAAGTGTACAACCATGCCAGTGTGGCTCTGAGAAAGCTAAAAGACCCTGCAATGATCCATTCTGGCAGTGTAAAAAGCCATgcaataaaacattttcatgtggCTTTCATAAATGTGATAAGATCTGCCATGCAGGTAATTGCGGTCCCTGTCCTAATTCTGGTACGAAGACATGCCCCTGTGGTGCTATTGAACGATTTGTGCAATGCCCAGATGTTATGGAAACCTGCATTAGCACCTGTAATAAGAAACATGATGATTGTGAACATAATTGCCCTGAAAAATGTCATAAAGGACCTTGCCCTCCTTGCCAAGTCTTGATGCAGAAGAAATGTTTATGCTCAACACATACTAGATCCTTACCCTGCAGCAAGGAGTTTAAATGTGAGACCAAATGCCGTGGAACAAGACCGTGTGGTAAACACAGCTGTGCTAGAAAGTGCTGTAATGGAAACTGCCCCCCTTGTGAAAAAACTTGTGACAAACCCTTACAATGTGGCAGGCATAAATGCACAAATATATGCCATCACGGTCCATGCTACCCTTGTCCTTTAGAATCAAAAGTGACATGCAGATGCAAAGACACATACATAACAGTACCATGTGGCAGAGAGAGACATACCAAACCTCCAAAATGTGGGCTACCATGCAAGATTAAGTATAAATGTGGGCATGTCGATGAGAATAAACATTCCTGCCATTTTGGGCACTGCCCTCCATGTAAAGCTATTTGCTATAAAACCTATCAGAAGTGCACCCATCAGTGTAAGGCCACCTGTCATGAGTATGTTGCGGTAGTATTTAAGCAAGTTGAAAAGCCTGCTACTCCATGGGAAGTTCAACCGCCAAAGACTAAAATTATGACTTTAGACTGTCCACCATGTGATACTCCAGTACCAGTAGTTTGCTTTGGTGAACATGAAACTGATCAACAGCCATGCCATTCGGCTGCAAGAAGGTCCTGTGGAAGGGAATGTGGACGTCCATTAGCCTGTGGCAACCATAAGTGCACTGTGCTCTGTCATCTGCATTCCCGTGATCCTAATTATCCAAATGTGCCTTCTAGCTGTAAGCAGTGTGATAGAGAATGCTTAGTTCCTCGTCCCACTAAATGTACTCATAAATGTAAGATACGAGCCTGCCATCCAGGGCGGTGTCCACCTTGTGACATACTTGAAAGACTATCATGTCACTGTGGCTTAACAGAAGTGTATCTACAATGTCGAGAGATTGCCACCGCAACAGAGGAAGTGATGTCTTGCAAGCAACAGTGTCCTAAAAATTTGGAATGTGGGCACAGATGCCGTAATAACTGCCACTCCGGTCCCTGTGGTGATCAAGTGTGTACAAAGAAGACTAAAATACACTGTCCTTGTGGAAACCTTAAAAAGGATGCACCTTGTAATGCAGTCAAGAATGGGGATGTTACGATAATCTGTGATGAATCATGTGAAACTAAAAAAGTGGCAGCAAAGTTGGTGACTGAGAAAGAGAAACAGAGATTAAAGGAGTTAGAAGAAGAGAAAAATAGACGGGAACTGGCTGAGTATGAGTGGAAATTGAgtgggaaaaagaaaaaatataaggaGAAGAAGATGGTTGTCAACAAAGATGATAGGGGTATCCTAAAGAAGTACTGGTTGCTAATTTTGTCAGTTTTAGTAGGTTTGATAGCAggtatatactatatattttatgtatga
- Protein Sequence
- MARRYRDAAAKLQQNVQKHLKDMKELSSSEDEEPYEASVLEGVFQSYSRGGGDTKLLNRTKNLLEEAISGRAVTCLICIGSIKRTDPIWTCDHCFSYFHLPCIQKWSNDSISLRSEETQGPITVYKPQKIEWCCPKCRNSYTKEQIPRKYRCFCSKTDDPPYHPWLIPHTCGEVCEKRLSTGENCKHRCLLLCHPGPCPPCPQTVNGVCYCKNEHKRVRCSAAKWSCGQQCKKALLCRTHKCENICHKDDCPPCSYTSVQPCQCGSEKAKRPCNDPFWQCKKPCNKTFSCGFHKCDKICHAGNCGPCPNSGTKTCPCGAIERFVQCPDVMETCISTCNKKHDDCEHNCPEKCHKGPCPPCQVLMQKKCLCSTHTRSLPCSKEFKCETKCRGTRPCGKHSCARKCCNGNCPPCEKTCDKPLQCGRHKCTNICHHGPCYPCPLESKVTCRCKDTYITVPCGRERHTKPPKCGLPCKIKYKCGHVDENKHSCHFGHCPPCKAICYKTYQKCTHQCKATCHEYVAVVFKQVEKPATPWEVQPPKTKIMTLDCPPCDTPVPVVCFGEHETDQQPCHSAARRSCGRECGRPLACGNHKCTVLCHLHSRDPNYPNVPSSCKQCDRECLVPRPTKCTHKCKIRACHPGRCPPCDILERLSCHCGLTEVYLQCREIATATEEVMSCKQQCPKNLECGHRCRNNCHSGPCGDQVCTKKTKIHCPCGNLKKDAPCNAVKNGDVTIICDESCETKKVAAKLVTEKEKQRLKELEEEKNRRELAEYEWKLSGKKKKYKEKKMVVNKDDRGILKKYWLLILSVLVGLIAGIYYIFYV*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00932106;
- 90% Identity
- -
- 80% Identity
- -