Basic Information

Insect: Phalera bucephala
Gene Symbol: -
Assembly: GCA_905147815.1
Location: LR990638.1:2350979-2355506[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0003 0.042 15.8 0.6 1 23 107 130 107 130 0.93

2 11 0.011 1.5 10.9 0.0 1 23 245 268 245 268 0.93

3 11 0.0099 1.4 11.0 0.6 2 23 295 317 294 317 0.95

4 11 0.00016 0.022 16.7 1.7 2 23 340 361 339 361 0.97

5 11 2.1 3e+02 3.7 0.7 1 14 365 378 365 387 0.84

6 11 0.0079 1.1 11.3 3.4 1 23 392 415 392 415 0.96

7 11 0.95 1.3e+02 4.8 1.6 2 23 423 445 422 445 0.80

8 11 1.7e-05 0.0023 19.7 1.7 2 23 453 475 452 475 0.96

9 11 0.0054 0.75 11.8 1.9 1 23 481 503 481 503 0.97

10 11 7.9e-06 0.0011 20.8 1.3 1 23 509 531 509 531 0.99

11 11 6.7e-05 0.0093 17.8 4.3 1 23 537 560 537 560 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0003	0.042	15.8	0.6	1	23	107	130	107	130	0.93
2	11	0.011	1.5	10.9	0.0	1	23	245	268	245	268	0.93
3	11	0.0099	1.4	11.0	0.6	2	23	295	317	294	317	0.95
4	11	0.00016	0.022	16.7	1.7	2	23	340	361	339	361	0.97
5	11	2.1	3e+02	3.7	0.7	1	14	365	378	365	387	0.84
6	11	0.0079	1.1	11.3	3.4	1	23	392	415	392	415	0.96
7	11	0.95	1.3e+02	4.8	1.6	2	23	423	445	422	445	0.80
8	11	1.7e-05	0.0023	19.7	1.7	2	23	453	475	452	475	0.96
9	11	0.0054	0.75	11.8	1.9	1	23	481	503	481	503	0.97
10	11	7.9e-06	0.0011	20.8	1.3	1	23	509	531	509	531	0.99
11	11	6.7e-05	0.0093	17.8	4.3	1	23	537	560	537	560	0.98

Sequence Information

Coding Sequence: ATGTGCCTGGTTTTGGAAATCCGACCACCTATTTTGGTAATTTTCTTTGTAGGTCAGCTTCTCTGCTCACTGCGGGTCACAGTTTATAAAGCGGAATCATCGAACGAACAGGAAATTTCGAATGAGCAAAATATATCGAATGAACAAAATACATCGAATCAACAAGAAATTACGTGCGAAATAGATCCTAAAGACGTTACGCCAGGAGCTACAAAACAGTTCGCTAAAAAGACTGAAAAGATACACAAACATAGGCACAATATTCAAGAGGTCCTATTGTGTACTAACGCAAAGCCTATAAAGAAGTACTTAGCTGGTTTTGCCTGCTGCTTCTGCGACAAAGAATTTCCAGATCCGGCTGATTTAAAAACTCATACAATACAAGATCACAAAGATGAAGAAACAGAATTCATGAAAGACAAACATATGAACGCATTTCTAGTCAAACTCGATATTACTGACTTAAAATGCAATATTTGCCAAGGCTCTATTGATTCTTTAGAGCGTATTGCCATGGCAGGAAAATGTGTTCAGCGTAAAAAAATCAAGATTGAAAAACTAGATTCCAAATCAAAATTATTGAAACGCACAGCTGCACCTAGAAATCTCATTCGAATATCCAAACAAACTGATAGCATTAAAACTAATGAGCTGGAGAAACATCGTAACAACATTAGGATAATACTGCAATGTACGAATGCTACCCCAATAAGATGTAGAGGCGGCATCGGATACGCTTGCAGTTTCTGCGGCAACGAATACCCCGAACCAGGAGATCTTAAAAAACATACGATAGAAGACCACGACAATAAAGCAAAACTAAAATTTATGGCTGGAAAAATGATGTTTTCTTACCTCGTCAAACTTGACATCACTGATCTCACTTGTAATATATGTCATGAAAAGATAAACAGTCTCGAAGAACTAACAGATCATCTTATCAAAACTCATGAGAAACCTCTATATACAGATATCAAAAATCATATAATGCCTTTCAAATTTGACGATGATGTTCTAAAGTGTTTATATTGTCAGAATATCTTCAATAGGTTCAAGAATTTGCAGCAACACATGAATGTCCACAGCAGAAATTATGTATGCGAGTTTTGTGACGCTGGTTTCGTCAACAGACACATCCTAGCTTGCCACACAGAAGCCCACAAAACTGGTACATTTAAATGTGATTTATGCCCCAAAGTTTTCGACACCCACCGCAAGAAGAAAAGCCACGAGAAATCTGTACATATTCATGCGAATCTATTAAGCAAGTGTGGTTACTGCAGTCAGAAATTCTCGAATTTTCGAAAGAAGGACGAACATTTGGTTAAAGTGCATGGGGTTAGAATGAAGCTTATCAAATGCCATGCTTGTGATAAGTCGTTTGATAGTAAAAGTGCTTTAACGATACACACGAAGCGAGACCATTTGATGGAGCGAAGACATCAGTGTTCGTTGTGTGAGATGAGATTCTTTGGTTCGAACGAGCTAAAACTCCACATGGTGAAGCATACGGGCTTGAGAGAGTTTAAATGTGATGTGTGTTTGAAGTCGTATGGGAGGAAGAAGACTTTAACAGAGCACATGAGGATACACAACGATGATAGAAGGTTCAAGTGTGAACACTGCGGGCAGGCGTTTGTCCAGAAGTGCAGCTGGAAAGGCCACATGAGGAGCCGGCACGGGGAATTAGTTTGA
Protein Sequence: MCLVLEIRPPILVIFFVGQLLCSLRVTVYKAESSNEQEISNEQNISNEQNTSNQQEITCEIDPKDVTPGATKQFAKKTEKIHKHRHNIQEVLLCTNAKPIKKYLAGFACCFCDKEFPDPADLKTHTIQDHKDEETEFMKDKHMNAFLVKLDITDLKCNICQGSIDSLERIAMAGKCVQRKKIKIEKLDSKSKLLKRTAAPRNLIRISKQTDSIKTNELEKHRNNIRIILQCTNATPIRCRGGIGYACSFCGNEYPEPGDLKKHTIEDHDNKAKLKFMAGKMMFSYLVKLDITDLTCNICHEKINSLEELTDHLIKTHEKPLYTDIKNHIMPFKFDDDVLKCLYCQNIFNRFKNLQQHMNVHSRNYVCEFCDAGFVNRHILACHTEAHKTGTFKCDLCPKVFDTHRKKKSHEKSVHIHANLLSKCGYCSQKFSNFRKKDEHLVKVHGVRMKLIKCHACDKSFDSKSALTIHTKRDHLMERRHQCSLCEMRFFGSNELKLHMVKHTGLREFKCDVCLKSYGRKKTLTEHMRIHNDDRRFKCEHCGQAFVQKCSWKGHMRSRHGELV*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -