Basic Information

Insect: Phalera bucephala
Gene Symbol: -
Assembly: GCA_905147815.1
Location: LR990637.1:5173878-5192747[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00028 0.04 15.9 1.5 1 23 225 247 225 247 0.99

2 11 0.26 36 6.5 0.2 3 23 256 277 255 277 0.96

3 11 0.37 51 6.1 5.4 1 23 281 303 281 303 0.97

4 11 0.033 4.6 9.4 1.3 1 23 308 331 308 331 0.92

5 11 0.00057 0.08 14.9 0.3 1 23 335 358 335 358 0.96

6 11 0.031 4.4 9.4 0.9 1 20 370 389 370 391 0.94

7 11 1.6e-05 0.0022 19.8 0.2 2 23 403 424 402 424 0.97

8 11 3.4e-05 0.0047 18.8 0.5 2 23 431 453 430 453 0.96

9 11 0.0019 0.27 13.2 2.6 2 23 472 493 471 493 0.97

10 11 2.9e-06 0.00041 22.1 0.9 1 23 499 521 499 521 0.99

11 11 0.0063 0.89 11.6 4.0 1 19 527 545 527 551 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00028	0.04	15.9	1.5	1	23	225	247	225	247	0.99
2	11	0.26	36	6.5	0.2	3	23	256	277	255	277	0.96
3	11	0.37	51	6.1	5.4	1	23	281	303	281	303	0.97
4	11	0.033	4.6	9.4	1.3	1	23	308	331	308	331	0.92
5	11	0.00057	0.08	14.9	0.3	1	23	335	358	335	358	0.96
6	11	0.031	4.4	9.4	0.9	1	20	370	389	370	391	0.94
7	11	1.6e-05	0.0022	19.8	0.2	2	23	403	424	402	424	0.97
8	11	3.4e-05	0.0047	18.8	0.5	2	23	431	453	430	453	0.96
9	11	0.0019	0.27	13.2	2.6	2	23	472	493	471	493	0.97
10	11	2.9e-06	0.00041	22.1	0.9	1	23	499	521	499	521	0.99
11	11	0.0063	0.89	11.6	4.0	1	19	527	545	527	551	0.93

Sequence Information

Coding Sequence: ATGGAGGAGCTATTAGCTTGTCGCGTATGCCTCGCCACCGACGTGAAACTGCGTTATTTATATCAAGATGGTCTGAAACCGGCGTACGAAAGTATTACTGGAATCGATttattacattcaGATGGCCTGCCACAGTATCTCTGCTCCTTTTGCTCGGCTTTGATGACCAAATATGTGACATTCAAAGAAAGATGTTTGAGGAGCCAGGAACTACTGAAATATGCATTGGATGATCAGGAAGTGTTAACCACAGACTACATCCGAACCATAGACAGAGTATCCCACAACATATCACTGCCATATACCATAGACATCATAGAAAATTTTATGGAACCAGACACAAAATTGAGAGTTAAAGTTGAACCAGCATTCATAGATTCagacatattatttaaaattgaagATATTGAAAGTAAAAGTGACGAAGAGCCattatcaaagaaaattaaaaagagaaagataaaaaagaagaatacagactgtgatattaaatacgaaaataaCAGTCCTATAGACAATGATTTTGAGAGTATTGACGATTTTGACCATACTATTGTTAATAATCATGACAGTTTGAGAGAGAAAGAGATAGATATGGTGTATTTGAGTAAGCAAGAACAGTTGGAAGAAGTGCTGGCCAGAAAAAACAGCCTTAACTATCAGAATTCGTTTTATAAGTGTGATATGTGTTTTAAAGGATTTGTTACTGATGTGACATATAAGAATCATATGCTGAGGCATGATCCTTCATCTGGCCCTGAAATATGCCAAATCTGCCAAACCAGATGGCCTGATGCTCGCTCTCTCCGTGCCCACACCACGACTTCCCACGAACGGAAATATTCTTGCAAACTCTGCGATTACACTTGCAAGAGTGGCCACAAAGCGAAGGAGCATCAGAAATGGCATGAAGGTCATAAGTTCGTTTGCAAGATCTGTGGAGCAAGGTTCGCGAAGTCCACGAGTCATCTGACGCATGTTCGTTTGAGGCATCCGTCGGAGCATAGCTGCGGGCTATGTGGGGAGAGGTTCGTGAGCCGAGCGGGACTCGCTATGCATGTCAAAAAGACTCATAGAGGAGACGAGAAGTCGAACGCGACAGCACAGTACAAATGCATTATGTGCAACTTCAAATTTAGGAGCTTGGAGGCGCTAAACAAACATACAACATACTTTGACAATGGAATCTGTGATAGTAATTTAAGTCCCTGCAGGTACTGTGGAGAAAGCCTCTCCACTCCTGACCTTCTGAAAGACCATCAGAAGACTCACCAGAGCGAAACGGAAGTAAGATGTGAtgagTGTGACCGAACTTTTGCCCAAAAGAAGTCGTTTGCTGTGCACTATCAGAGAGTTCATTTGGGCATCAAATCTAAGTATAAGACGCCGGATATGAGGGGGCGAACAGCTGTGGTCTGTGAAATTTGCGGGAAGAAGTGTATTTCCAAAGCGACGTTGGTCTGCCATCAGCGAACTCATACAGGCGAGAAGCCTTTTCAATGCACAGAATGCCCCAAGAGTTTCAGCATATTCCAACTACTCAAGATACATATCCGTACGCATACAGGGGAACGCCCATTCAAGTGTATACACTGCCCTAAGGCTTTCAAACATAAGGCTGCATTAAATCGACATGATCGGgtttgtggccaccggctgttggaacttgtcaagctgcctttaaggcttccaactccgcttaacgactaccatgtggaagccgggaccaacggcttaacgtgccttccgaggcacggagacgctcgaatttga
Protein Sequence: MEELLACRVCLATDVKLRYLYQDGLKPAYESITGIDLLHSDGLPQYLCSFCSALMTKYVTFKERCLRSQELLKYALDDQEVLTTDYIRTIDRVSHNISLPYTIDIIENFMEPDTKLRVKVEPAFIDSDILFKIEDIESKSDEEPLSKKIKKRKIKKKNTDCDIKYENNSPIDNDFESIDDFDHTIVNNHDSLREKEIDMVYLSKQEQLEEVLARKNSLNYQNSFYKCDMCFKGFVTDVTYKNHMLRHDPSSGPEICQICQTRWPDARSLRAHTTTSHERKYSCKLCDYTCKSGHKAKEHQKWHEGHKFVCKICGARFAKSTSHLTHVRLRHPSEHSCGLCGERFVSRAGLAMHVKKTHRGDEKSNATAQYKCIMCNFKFRSLEALNKHTTYFDNGICDSNLSPCRYCGESLSTPDLLKDHQKTHQSETEVRCDECDRTFAQKKSFAVHYQRVHLGIKSKYKTPDMRGRTAVVCEICGKKCISKATLVCHQRTHTGEKPFQCTECPKSFSIFQLLKIHIRTHTGERPFKCIHCPKAFKHKAALNRHDRVCGHRLLELVKLPLRLPTPLNDYHVEAGTNGLTCLPRHGDARI*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -