Pbuc015590.1
Basic Information
- Insect
- Phalera bucephala
- Gene Symbol
- znf711
- Assembly
- GCA_905147815.1
- Location
- LR990614.1:35520244-35537355[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 2.4 3.4e+02 3.5 0.4 2 23 6 27 5 27 0.96 2 13 0.057 8.1 8.6 0.1 1 23 1031 1054 1031 1054 0.93 3 13 7.2e-05 0.01 17.7 1.8 2 23 1152 1173 1151 1173 0.97 4 13 0.00019 0.027 16.4 2.5 1 23 1179 1201 1179 1201 0.98 5 13 0.008 1.1 11.3 2.6 2 23 1208 1229 1207 1230 0.94 6 13 0.1 14 7.8 0.5 6 23 1244 1261 1243 1261 0.98 7 13 0.018 2.6 10.2 0.9 3 23 1268 1289 1267 1289 0.96 8 13 0.0023 0.32 13.0 0.1 2 23 1306 1326 1305 1326 0.97 9 13 0.00021 0.03 16.2 2.7 1 20 1332 1351 1332 1354 0.92 10 13 0.001 0.15 14.1 0.4 1 23 1362 1384 1362 1384 0.98 11 13 0.0062 0.87 11.6 7.2 1 23 1390 1412 1390 1412 0.98 12 13 7.2e-06 0.001 20.9 1.3 1 23 1418 1442 1418 1442 0.98 13 13 0.0011 0.16 14.0 5.1 1 23 1448 1470 1448 1471 0.95
Sequence Information
- Coding Sequence
- ATGGATCAGCTCGTGCAGTGCCCCGTCTGCACGCTGTTCCTCCACAATGGGATGACCCTTGAGTCGCATCTGGACACACATCCCAAAGATCAAGTCATAAAGGCACTGTGTAGTCTGACAGCCAAGGGTTCCAACTATGGAAGCAGGACTTCCACTCCCCTGCATTCAGAGAGATCCTACAGGAGCAGGTCTCGGACGCCTGCCACTGAGGATAGTGGGCGATGGAATGGATCCCATAGTACAGAGAAAGACCGCTACTGGCGAAGAACACCAAGTAGAACTCCTAAGACTAATCCTATGTCTACTGCGTCCAGAAACAGTACACCTGATATAAGAATGAATGAGATGAATTTTGATAGTAACTCTATTAGCAATTCAGTCTCACACTCAAGCTCACCATTTGTAATGAAAGCTGACAAAGTCCAACAGACTTACCAACCACCACCGATTACAGAATTCGATCAGCCATATGTGTATTACCAAGATCCGCAAGAGGACAGAGAGATAAAGTATTCCCGTAGTGCTGAATATAATGCAATAGACAATTCAAACAATGTATTTACATATAACATGCCAAGTATGGGAACTGGTGTGAAATTGTTACCAGCTGGACCTAGGAGAAATAATGATATTGTCAAAATTTtaccaaaacaaaacaatatactGCTCAAGGCTAATATGGGTGGTATGCAATATATTGGACCGGGAGTGAAGCCCATGCATGTTGTTGTGCCCACAGCGCCCACATTCCTTCAGAAGAATGTtcaaaataatatgataatgACAGGCAACATACCAAACACGCAGGTGCAGATCGAGACAAAAACTGTTGCACCTCCTTTAGCTACAAATTTGAACCAAATGACCTCAAACACATTCACTCCTGGCACAACAGTTGTAACACAGAACTCTCAGATAATCTACCGGGAGATGGTCCACAATATAGATGGTAAGCCTTTTATAACTAGCATGCCTACAGTACTCAGTGGTCATGATAATGTTACTAATGTTGCTCAAGCGAGTTCTATGTACCAAAATGTAATGGTTGTTGATCAGTTTGGGAACACATCTTGTATGTACACAACACCTCAACCTATCATACCCAAAGCTTGCACCACATCAATATACAATGACAGTGGTTCACTTCTTCCTAGTATACACATGGAGAAATCCGTTCAAAACTTGAATGATCCTAAAACTCTTATTATTGAGGTAGGCCCCATAGTACCCCCACAGGAACAGGCTTCAGCAGCCTCCTGCCAAACCCCAGTTACCAACATCCCACAACCAGTTACAAGTAACTCTGAGAAACATGGGAGACCTCCAAATGATGCTGATGTGAAAAATGATATGCCTGGTTCAAGTAAAGGTTTGAAGATTCTCAGTAATATAAAGGTTGAAGTTCCTGTTCAACACCACAAAAATATGGTGAACACTATCATGGACTTGACTGGGTCCAGTGAGACAGATTATCCAGTACGTTCAGCATCTCCTGAGAAGATCTTGCCAGATTTCGATGATAATCAGGTAAAGGATGAGCCTGAAAAGATTCTACCTGATTTAGATGATAATAACCACAATAATAGAATGATGGAGCCTGAGAGAATTCTGCCTGATATAGAGGATAACAATCAAATGATGTCTGATGAATCTACCCAGCCTTCTATGTCGAACGATAGTGTTGTCTCCTCCCACACATTTTCTGTGATTAAGAATGTTGGTAACCCTCCCTCTTATAAAGACTTGAACAAAAGTTCTGATAATAAAATGGACCCTGAATTTTCTGATAGCTGTCCTGTACCTGATTTAATATGCAATGAGAAACCTTCAATATCGCCCTGCAGTGAGCTGTCAGAGAATGGTGACAATTCAACCGATCGTACCTCAATGTCCCCCAAACCTGAGAGTAGTCAAATAAGCCGTAGTGTAGATGTTATAGAGAAGAAAACTCCGTGTCCGCAGAGACAATACAGACACAATACGCTAAGACTGAACAATATTTATGTGAAAAAGCATAAGAAAGTGTTGCAGATAAAAAACGTGAAGACATTTCCTGTAAGTAGTACAAGTATAATTGATGAGCCCATGCCATCATCCTCTAAATGTAGGTCGCCAGAAAATTTTACTATGAATAAGATACATCATACAGATAGATGTGAGCCTAAAGAAAAAGGGAGTGTGCTGCACACTATATCAGTTGAGGAGATAAAagacaatgatgataataatgattttgaTGCTGATACTGAAGAACAGTCTATGGATATAGAACCAGTTGGGCCATCCAGAATAAGCCACTCCAATGAGTTTTCGTCCAACGACATAGTGCAcgtaaaagaagaaataaacacTAGTAATGAAGGAGGGTACAGTAACCAGGGGCGCGTGCTCACGCCACTGGAGACTTTACGACCTATCAATGTTATAACTTACGGAAACATGTCGGGTACTGGCGAGTTCGAGGATGAGTCTAATGACAGAGAATTATTGGACCTTGAAGCTGCGtccaaaaataaacagtttGTCAGTATGATGAATGAGAATTATTTTGGGGATAATATTTACGCGGATTATTTCACTCCTGATAGGGTGGAATCCTTTGATGCTGTGCGGGAGTCTACAGGATATAAGGAGGGTCCTAAGGATGGTATGTATAACATCTGGGGTGAGCCGTCACAGAAGGAGAATGAGTTTGTGCTACCAAACTTTATACATGAGAGCTATAAGATCGCGGAAAGTAGTGGAGGGGAATATACAGACATGGGTAGTAGAGAAAGACAGGGTGATGGGGATGGGGACGGGTGTGAAAGGGACAGCAAGGCGGATGTGCTGAGTGAGAGCAGGAGTGAGAGCGAGGCGCCACTGAACATCTGCGCGGACGAGCGTATGCCGCCGCGGGGAGAGCTGAGCGGACAGGAGAGCAACGGAGATATGGAGTCGCCGTGGACTggaATGTACAGCGAGATGGCGCCGACCGAGCCGTACGACCTGATCGCGCGCGAGAGCTGGGTCTCCGACGGCTCCGAGATGGACGCCAACGAGAAGAGGGATACACtTGAGGAGGAGCTGCAGGTGGCAAAGACGCGCGTGCACACGTGCTCGCAGTGCGGCGCGCGCGCGGCGTCGGCCCGCGAGCTGCGCGCGCACCGAGCGCTCGCACACGCGCCGCCCACGCACACGTACAGCCGCCTCGTCACCGCCAGGACCATCAAGCGGGAGGAGAAGCACGACAAGATTACACTCACCAACAACCTCCTAACAATAGACTCCAAAGAATCGATAACATCAACGATCCTGCAAGTGTATGAGACAATGGACGAGTCTAAGCCGAAGATCGAAGGCCTCATAAAGCAAGAGACCAAGCGGAGGCGGAAGGACTACGTGTGCCCCACGTGCAAGGTGGACCAGCTCACCGACGTGGCGTTCCATGAACACCTGAAAATACACCCACTGGAATGCCTCACCTGCGGGAAATGCTTCTTTAAAAGAGCGAATTTAGCACTGCATATAAAAACACACTTAGGGATTAAGAATTACAAGTGCGACGTGTGCGAGAAGCGCTTTATCACGCGGCAGAAGCTGATGGAGCACCACAACGTGCACACGGGGCGCGCGCCCATCAAGTGCACCGTGTGCGACGACACATTTCGCCGGTACTCCAACATGGTGCAGCACAGGGACCGGCACCACCTGGCCAAGCGCGGCAAGGTGCGCGACTTCGTGTGCGCGTGCGGGCTGGTGTTCCACTCGCGCGCCAAGCTCCGCTGGCACCGCGAGACGCACGACGACAAGCCCAAGGCGTGCGTGTACTGCAGCGACAAGTTTGTGCACGCCGCCTCGCTCACCAGGCACGTGCGCCGCTCGCACAACGAGTACTTCCTCTCCGACCGGCTCAAGGGCAAAGCCGAGAACGTGCCCTGTCCCGTCTGCAAGCAGGTATACCTCAGATCAAACCTCCGCGCCCACCTCCAAACGCACACGGGCCAGCGCCCGTACCACTGCGTCATCTGTAACAAGTCCTTCACGACCAAATGGAACTTGAAACTTCATAAATGGACGCACATGAGCCGCTCAGCGAAACCGTTCAAATGCAACCTTTGCAAAGGCGCATTTATCCGTCAGACGGAGTACATATCACACATGAATGCTCACAAGTCGGTGAGGCCGTACACCTGTAATTACTGCGGCTGCCAGTTCATAAGGAAATATAACTGCCAGCGACACGTGCGCGAACACGAGATGGGGAAGAAATACGTGTGCAAGGTTCCCGAGTGCGGTAAGTCATTCCACCGTAGTTATTACCTGTCGGAGCATATGAAGGTGCATAGCGGAGCGAGGCCGTTCTCTTGTAACATCTGTGGGAAGACGTCTAGCAATAAGTCGAATCATAATAAGCACGTGAAGATACATCACGCGAGGGAGCCCGTCGCTACTGAGGCGTAA
- Protein Sequence
- MDQLVQCPVCTLFLHNGMTLESHLDTHPKDQVIKALCSLTAKGSNYGSRTSTPLHSERSYRSRSRTPATEDSGRWNGSHSTEKDRYWRRTPSRTPKTNPMSTASRNSTPDIRMNEMNFDSNSISNSVSHSSSPFVMKADKVQQTYQPPPITEFDQPYVYYQDPQEDREIKYSRSAEYNAIDNSNNVFTYNMPSMGTGVKLLPAGPRRNNDIVKILPKQNNILLKANMGGMQYIGPGVKPMHVVVPTAPTFLQKNVQNNMIMTGNIPNTQVQIETKTVAPPLATNLNQMTSNTFTPGTTVVTQNSQIIYREMVHNIDGKPFITSMPTVLSGHDNVTNVAQASSMYQNVMVVDQFGNTSCMYTTPQPIIPKACTTSIYNDSGSLLPSIHMEKSVQNLNDPKTLIIEVGPIVPPQEQASAASCQTPVTNIPQPVTSNSEKHGRPPNDADVKNDMPGSSKGLKILSNIKVEVPVQHHKNMVNTIMDLTGSSETDYPVRSASPEKILPDFDDNQVKDEPEKILPDLDDNNHNNRMMEPERILPDIEDNNQMMSDESTQPSMSNDSVVSSHTFSVIKNVGNPPSYKDLNKSSDNKMDPEFSDSCPVPDLICNEKPSISPCSELSENGDNSTDRTSMSPKPESSQISRSVDVIEKKTPCPQRQYRHNTLRLNNIYVKKHKKVLQIKNVKTFPVSSTSIIDEPMPSSSKCRSPENFTMNKIHHTDRCEPKEKGSVLHTISVEEIKDNDDNNDFDADTEEQSMDIEPVGPSRISHSNEFSSNDIVHVKEEINTSNEGGYSNQGRVLTPLETLRPINVITYGNMSGTGEFEDESNDRELLDLEAASKNKQFVSMMNENYFGDNIYADYFTPDRVESFDAVRESTGYKEGPKDGMYNIWGEPSQKENEFVLPNFIHESYKIAESSGGEYTDMGSRERQGDGDGDGCERDSKADVLSESRSESEAPLNICADERMPPRGELSGQESNGDMESPWTGMYSEMAPTEPYDLIARESWVSDGSEMDANEKRDTLEEELQVAKTRVHTCSQCGARAASARELRAHRALAHAPPTHTYSRLVTARTIKREEKHDKITLTNNLLTIDSKESITSTILQVYETMDESKPKIEGLIKQETKRRRKDYVCPTCKVDQLTDVAFHEHLKIHPLECLTCGKCFFKRANLALHIKTHLGIKNYKCDVCEKRFITRQKLMEHHNVHTGRAPIKCTVCDDTFRRYSNMVQHRDRHHLAKRGKVRDFVCACGLVFHSRAKLRWHRETHDDKPKACVYCSDKFVHAASLTRHVRRSHNEYFLSDRLKGKAENVPCPVCKQVYLRSNLRAHLQTHTGQRPYHCVICNKSFTTKWNLKLHKWTHMSRSAKPFKCNLCKGAFIRQTEYISHMNAHKSVRPYTCNYCGCQFIRKYNCQRHVREHEMGKKYVCKVPECGKSFHRSYYLSEHMKVHSGARPFSCNICGKTSSNKSNHNKHVKIHHAREPVATEA*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00622251;
- 90% Identity
- -
- 80% Identity
- -