Pbuc046467.1
Basic Information
- Insect
- Phalera bucephala
- Gene Symbol
- ZNF131
- Assembly
- GCA_905147815.1
- Location
- LR990638.1:12223123-12226457[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.012 1.6 10.8 0.3 3 21 108 126 108 127 0.89 2 19 7.2 1e+03 2.0 0.1 3 23 133 153 132 153 0.79 3 19 0.025 3.5 9.8 0.2 3 23 160 181 159 181 0.92 4 19 0.00048 0.068 15.1 0.3 1 23 185 207 185 207 0.95 5 19 5.4 7.6e+02 2.4 6.0 1 21 210 230 210 231 0.94 6 19 0.0006 0.084 14.8 0.3 1 23 243 266 243 266 0.94 7 19 7.6e-05 0.011 17.7 0.6 1 23 272 294 272 294 0.98 8 19 3.8 5.3e+02 2.9 0.2 5 23 304 322 301 322 0.94 9 19 4.1 5.8e+02 2.8 1.0 1 23 328 351 328 351 0.90 10 19 0.00016 0.023 16.6 0.7 2 22 477 497 476 500 0.89 11 19 5.1 7.2e+02 2.5 0.0 3 23 504 525 503 525 0.94 12 19 0.0041 0.57 12.2 0.3 1 23 530 553 530 553 0.94 13 19 5.4e-05 0.0076 18.1 0.3 2 23 559 580 558 580 0.96 14 19 0.6 84 5.4 1.8 2 20 584 602 584 604 0.93 15 19 7e-07 9.9e-05 24.1 1.1 1 23 630 653 630 653 0.95 16 19 0.00031 0.044 15.7 0.5 1 23 659 681 659 681 0.95 17 19 0.023 3.3 9.8 0.1 1 23 687 709 687 709 0.98 18 19 0.0014 0.2 13.7 0.2 1 23 715 738 715 738 0.94 19 19 3e-05 0.0041 19.0 0.8 2 23 745 767 744 767 0.95
Sequence Information
- Coding Sequence
- ATGGACCACGTATTGCCCACCGGAATATGCAGACCCTGCTCCGAAGACGTCATCGCCGCAGTCAACGTCCGAAATCTCTGTGCAAAATCGATCCAACACTGGAACGAAGCGACAACATTCCTCTCCCAAATCCACGACCCAACTGACGATGACAAAGCGTACTTCGTCTTTTATACCGACGAGCAGACGATAATTAAAGACCAGATTGATAAAGTACCCACCATAAATGATGCCCTAGAGAGGCTCAATATGAAATATAATGAAAAGCCTCAAAAAATTCGACGGCAGCGGAGAAAACGAGACAATATGTTACCTTGCTGGTGTCCTACCTGCGGCAAAGAGTTCTCAAACCCTGAATTCTTGAACTTCCATTTGAAAAACACTTTGAACCGCGCATGCGATCAATGCGGCATAGTCGTAGCCAAAAAGAAGTTAGCTAAACACTACAGCGCGGAACATGATTTGTATGTCGTtgattgcaatgtttgttataCGATATTTGACGATGAGGATTCTTTACAGCAACATTGGACTCAAAACCACACGAGCCCTCACTCGTGCAACATATGTGGCAACGGATACTCAAATTCCAGAGGTCTGAGAGCCCATATATATGCGCATACGCTATTTCATTGCAAATCTTGTAACCTCAGCTTCGACAACGTAAAGTGTTACAGGTATCACCAGAAACAGTGCAAAGAAGTCGAACAATTAGTGttcaaaaactttatttgtgaTCATTGTGGCGCTGAGTATGATAGAAAACCGTCCTTACGGATCCACATAATACAGAAGCATTTAAATGTTTTACCATATGTTTGCCAAGTTTGCGGCAAGCGAGCTTCGACCTTAGCGCACTTGAAATCGCACGAGAAAGTTCACAAGAGCGAAAGGAAGACTTACCAATGTTATTGTGGTGCAAAATTGCGTACGGAACTTGGATATCAACTGCATCTTAGAATTCATACTGGTGAGAGACCGTATGAGTGTGAATTCTGTGGCGACAGATTCCTGTCATCTTCAAGAAGGCTGGATCATATAAAAAGACGGCACAGAGGAGCGAAAGACATGCCACATGTATGCGAAAAGTGTTCGGCTAGATTTATGAAAGAAGAATCCGTCATTCCAGCAGGCGCATGCGTCAGCTGCGCCAGCACAGCTCTAGCAGCGCAAGAATTCAGACTATTCGTCAAAACATCCGACAAAATATGGCGGAAAGCGGTCAACAACATATCTATCATACCATGGACAGTTTCCCCGCCAATCAAATCTGTCTGCGCCATCTTAAAATCCAGTGATCTTTCACTCCAAACTTTCAAAGACTTCAATAGGGCTGACCCTAAATCAATTCTTAATAGACTCAAAAACCGTGTTCCTAAGAAAGTCTCCGAGAGAAGACCTAGAGGCGCCCGCACTGGTCCTTCGTGCATCTGTCCTGACTGCGGAAAGAGCTTTCTAAGTCCATACTACCTAAATATGCATCTCAGAAACAGCGGACATAAGGAAGCATGTTTAATTTGCGGTTCTGTACTCATTCGAGGCACTGAGATGAAGGAACATTTGAGCTCTGTACATAAGGATAACTCGTTCTTATGCAATCAATGTCCCATTTTGTTTTCTAATGATGTAGAATTAAAGAAACACGTCAAAAAAGCTCACAGACCGGGCGCGCTGACATGTTCCGACTGCGGCAGAACTTTCCCTAGGCAAGCTTCATTCGATTCTCATGCTCAAATGCACGCGGTAAGGACTTGTAGGTCCTGTGGGGTCCAATTTACGAATCGGGGGTGTTATAGGGAACATAGGTCTCAGTGCGAGCCGGATGCAAAACCAAACGCGCAATTGTTACCACGAAATCGCCGTTCAAACATCCGCGATCCAGCCACATTTACCTGCGACCATTGTGGAAAAACGTACACTTCTAGAGCACAATTAAAAAACCATATAATTTGGATTCATATGGATATACGGCCACACCAATGCCAATGGTGCGGGAAAAGGTTTTATACACCCGCGAGACTGGCTGAACATACAGTTGTCCATACCCGCGTCCGAAATTTCGAATGTGACATTTGTGGCGCGAAACTTgtatccaagatggcggttgtTTACCACAGACGGAGACATACAGGTGAAAGACCTTACGAGTGTCCGGATTGTGGCGAAAAATTCATTTCTGCGTCCCGTAGATCGGAACACGCTAAGAGGAGACATAATAAAGGACATAAGTTGCCTTGCTTGAAATGCCCAGCTAGTTTTGTTCGAAAACATGAGCTTAAAAAGCATATGGAGAAAGCGCATAGAGCACCGCCCGAAACTATTTTGGTTTGGTGA
- Protein Sequence
- MDHVLPTGICRPCSEDVIAAVNVRNLCAKSIQHWNEATTFLSQIHDPTDDDKAYFVFYTDEQTIIKDQIDKVPTINDALERLNMKYNEKPQKIRRQRRKRDNMLPCWCPTCGKEFSNPEFLNFHLKNTLNRACDQCGIVVAKKKLAKHYSAEHDLYVVDCNVCYTIFDDEDSLQQHWTQNHTSPHSCNICGNGYSNSRGLRAHIYAHTLFHCKSCNLSFDNVKCYRYHQKQCKEVEQLVFKNFICDHCGAEYDRKPSLRIHIIQKHLNVLPYVCQVCGKRASTLAHLKSHEKVHKSERKTYQCYCGAKLRTELGYQLHLRIHTGERPYECEFCGDRFLSSSRRLDHIKRRHRGAKDMPHVCEKCSARFMKEESVIPAGACVSCASTALAAQEFRLFVKTSDKIWRKAVNNISIIPWTVSPPIKSVCAILKSSDLSLQTFKDFNRADPKSILNRLKNRVPKKVSERRPRGARTGPSCICPDCGKSFLSPYYLNMHLRNSGHKEACLICGSVLIRGTEMKEHLSSVHKDNSFLCNQCPILFSNDVELKKHVKKAHRPGALTCSDCGRTFPRQASFDSHAQMHAVRTCRSCGVQFTNRGCYREHRSQCEPDAKPNAQLLPRNRRSNIRDPATFTCDHCGKTYTSRAQLKNHIIWIHMDIRPHQCQWCGKRFYTPARLAEHTVVHTRVRNFECDICGAKLVSKMAVVYHRRRHTGERPYECPDCGEKFISASRRSEHAKRRHNKGHKLPCLKCPASFVRKHELKKHMEKAHRAPPETILVW*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -