Basic Information

Insect: Phalera bucephala
Gene Symbol: -
Assembly: GCA_905147815.1
Location: LR990637.1:11573451-11621611[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0001 0.014 17.2 1.2 1 23 24 46 24 46 0.96

2 16 0.012 1.6 10.8 5.5 1 23 52 74 52 74 0.97

3 16 2.4e-07 3.4e-05 25.5 1.3 1 23 80 102 80 102 0.99

4 16 3.1e-06 0.00044 22.0 0.9 1 23 108 130 108 130 0.99

5 16 0.0017 0.23 13.4 4.1 1 23 136 158 136 158 0.97

6 16 0.031 4.3 9.5 4.4 1 23 165 188 165 188 0.95

7 16 2.8e-05 0.004 19.0 0.5 2 23 197 219 196 219 0.93

8 16 1.4e-05 0.0019 20.0 1.8 2 23 226 247 225 247 0.96

9 16 1.5e-06 0.00021 23.1 1.8 1 23 253 277 253 277 0.98

10 16 0.00039 0.054 15.4 0.2 1 23 283 305 283 305 0.98

11 16 0.00098 0.14 14.2 1.7 2 23 313 335 312 335 0.96

12 16 2.3 3.2e+02 3.6 0.9 1 23 342 365 342 365 0.94

13 16 0.0086 1.2 11.2 4.1 2 23 372 394 371 394 0.96

14 16 0.26 37 6.5 8.1 1 23 674 696 674 696 0.91

15 16 1.6 2.3e+02 4.0 0.6 2 23 707 727 706 727 0.72

16 16 0.005 0.7 11.9 0.8 1 23 853 875 853 875 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0001	0.014	17.2	1.2	1	23	24	46	24	46	0.96
2	16	0.012	1.6	10.8	5.5	1	23	52	74	52	74	0.97
3	16	2.4e-07	3.4e-05	25.5	1.3	1	23	80	102	80	102	0.99
4	16	3.1e-06	0.00044	22.0	0.9	1	23	108	130	108	130	0.99
5	16	0.0017	0.23	13.4	4.1	1	23	136	158	136	158	0.97
6	16	0.031	4.3	9.5	4.4	1	23	165	188	165	188	0.95
7	16	2.8e-05	0.004	19.0	0.5	2	23	197	219	196	219	0.93
8	16	1.4e-05	0.0019	20.0	1.8	2	23	226	247	225	247	0.96
9	16	1.5e-06	0.00021	23.1	1.8	1	23	253	277	253	277	0.98
10	16	0.00039	0.054	15.4	0.2	1	23	283	305	283	305	0.98
11	16	0.00098	0.14	14.2	1.7	2	23	313	335	312	335	0.96
12	16	2.3	3.2e+02	3.6	0.9	1	23	342	365	342	365	0.94
13	16	0.0086	1.2	11.2	4.1	2	23	372	394	371	394	0.96
14	16	0.26	37	6.5	8.1	1	23	674	696	674	696	0.91
15	16	1.6	2.3e+02	4.0	0.6	2	23	707	727	706	727	0.72
16	16	0.005	0.7	11.9	0.8	1	23	853	875	853	875	0.98

Sequence Information

Coding Sequence: ATGAGAAACGCACCAAAGAAAGGCAGTACTAAAGCtagatatgatgatgatgattatgagaAACCTGTCTACACTTGTCCGTATTGTAAGAAGACTTTCACGGACTACTCCTCCTGGGGCATCCACAAGCAGCTCCACACATCAACGAACATATTCGAATGCGAGCTCTGTACATACACATGCAGAATTAAAAAGTATCTTACGAGACACATGAAGTTTCACCAGCCTCCTACTGATTATAAGTGTGAAGTGTGCGGAAAAGGCTTCCGGTTTAGAGATAAACTCAGGAGCCATATGAGGGTACACACTGGCGAGAAGCCGTTTAAATGCAGTGTTTGTGGGAAGGCTTTCAGTGCGAATTACTCCTTGTCCACCCATATGTACACCCATACTGATGAGAAGCCATTCAAATGCACTTTCTGCGAGTACGCGTGTCGGGACAGCTCCACGCTCAGGAAACATGAAGAACGACACATCGGACTCCACAAAATATATCAATGCAGAATTTGCAATAAAACttaCGATTGTAAATCTAAGCTGACATCACACCAAGAAGAGAAACATTTCGGAATTGACAATAAAAAGATTCCATGTGAACAGTGCaataagttttttaaaactagacAGAATTTGGAAAAACACGTGCAAGCAATTCATGAGAAGTCTCTACAATGCGAATGCGAAGTTTGCGGACATGTTTTAAGCAACAAAGCGAATCTGACTGCGCACATGAAGAGGCACGTCGATGTAAGACCTTATAAATGCACTTTTGCGAAGTGCGGGAAGCAGTTTAAAGATAAGagCGATCTAAAACGTCACACGATCATCCATTACCCGGATAAACAGTTTCCTTGTGAGATTTGTGGAAAATTGTTCGCAAGGAAACGTCGTTTGGACCTTCACCTCAATGTACACGCGCCCAAGAAGAAATCTGTCGAGTGCGAACACTGTGGCGTGCTGTTCTACAGCAAGAGATATCTAACAAAGCACGTCAAAATGAAACACACGAAGAAGAAACAGAAATATATATGTGATTTGTGCGACTTCAAGACCCATAACAAGCCGAGTATTGTGATGCATTTGAAGTATGGCCACAGCGGGTGGAGAGACAAAAAATGCCAGTTATGTAATAAAGATTTCAAGAAACATGAATACTTGAAATTACATTACTTGAGAATTCACAACTTAAGATTTAAGATGGGGACTATTAAgCCAGAAGTAAAACCGCCAGTTGTTATTAAAGAAGAACCATTAGATGAAGAATATAAGGAAGAATTACAACCAGAAATTGATCTACTAGAAATACATAAAGAAGAATTGAAAGaagtcAAAACACCAGAACCAGAATTTTCGGACTCAGTGAAAGATTATTCAAATGCAGTATTTTCCGAGGATGTATCGCACTCTATACTGGAAGGGGGCAGCAGAGTGACCAGCGAACCGGAGAAGGAATTCGATGGGGTGTTTATAGACCATGATATGGAGAAACCAGATGTTAATATTATTGAAGACCCGCCCCCCGATCCGGAGTTGGAAACTATAACGACGTACTCCAAGAAGGTATTATCAGAGGATATATCACGCTGTTTACTGGAGAGGGACGGGAGACAGGATGAAGGGCCAGAAACAGAGATCAACCGTATATTTATCGATCATGTAACTGAAAAACCAGAGAAGCTTGGAGTGGTAAtagcaaagaaaaatataagcgCTTACAAAGAGAAATACGTCAAGAAAAAAGTTAAAGAAATGTTATTGGAAATTAGCAATAAGAAGGAAGCAGCCATTttggaggaagcgagaaagcAATATAATACCAGGATCGAAATGGCGTTGAGGAGAGCTAATAAGAAAgAgcatgtaaatattaaatatttccaaaataaaaaatctgaAGATACCACCAACGATATAACGGAAGGTGATGACATTGCTGAGCATAACGAACCAGTAACGGATGATGTTGATAATGATGGCGATGATCAAACGGtgaagaataataaaattaagtttaatacCCACCAATGTTATATCTGTTTTAAGcTGTTCCCAACTAAATCAAATCTAACAGAGCACTGCAAACATCATTTCGATATATGCAATtacaaaatgcttaaaaaatgcCCTTACTGTGGCTATGTAACTAACCTAAACATACGCCaacacttaaaaataaaacatgatgTCACTCTACAATTTCCATACAACAAAATAACTGAACGAAATAACGAGAGTGGGTCGAAATATATTTACGAAATCGACAAAGATACGGCTTTAGAAATTATACCAAGCATTAAAAATTTGAATCGGTTAGCTTCAATTAAAATAGATGAACGCAAAAGACATGATGTTAATAACAAAATTGCTAAAACCAAGCTTATTAGGAAAGGCAATCAATGGATTGTTGATAAAGAACTTATTAAACTTTCTACAGAGAATATTTTACCAGAATTTTCTTTGGATGAGTACgcgaaaatcaaaattaaaggtGATAAATACGAGAATGTGTTGAGAAAATTAGGCTTTCTGGCTAAAAAACGCGGTCTAGTTATGTTGTTTCCGTGTGATGGATGCGAAAAAATATGTCAGACTTTAAGCGGGTTAGTTCTTCATAAGAGAAAACACGAGATAAACCCGAAAGCGTTCAAACCTAAAGTATGGAAAAATAGAATTGTTAAAGCTAAAAATGTGACGAAAACTGAAAATTTGATGTTTAATAAAgaagattttaaaaatttgaaagTTATATGGAATTTGAAATTAGCGAGAAATCTTAATAAAGGCAAAGGGTTACGATAtgacaaaaatgttaaaacagCTGATAATAATCAAAATGCTAGAAATATGGACAGTGTTGCCAGTAATAGTAGAAATGATgctactaataataatgttggcAGCAACAACAACACGAAAACTACCACTAATATTGCTATTAAAAGAAATAGAGTTCCAAATGGTAGAAATAAGATTGAAAATCGTTTTGCTAAGCCAAAACCTATCGTAAACAAACATAAATGCGATAAGGAACTTATGGAATTCTACGAGAATAATATTAAAGGTGCTGATATAGAATTTTGGCAGTTTTTGAAGATCTTCAATAAAATGAGTAGAGAAAATGTTAATGATTTTAAGGATTTGGAGCATAGAAGCGATTTTGGTTTACATTTTGATGGCAGCACTGAGAGTTCTTTAAATGATAACATAGAATCCGAGAATAATCTACCGAAAGAAgtgataaaagaaaatattgcaGCTAGCACCACTGAAACGTCAAGATTACAATTTGAAAATAGAATCGGTAGATTATCTAATAAGGAGTGTGGCAATACTAGGATACTTAAAAAGGTGTCAAAGATAAATACTTACAGAAGAGTTTTGATGATAAGTAAGAAAGATAGACAGAGAAGGAATGATATTAAAAACCAATTGCGGAGAAGGATAGAAGAATCTAAAATTACTGATAAGaactaa
Protein Sequence: MRNAPKKGSTKARYDDDDYEKPVYTCPYCKKTFTDYSSWGIHKQLHTSTNIFECELCTYTCRIKKYLTRHMKFHQPPTDYKCEVCGKGFRFRDKLRSHMRVHTGEKPFKCSVCGKAFSANYSLSTHMYTHTDEKPFKCTFCEYACRDSSTLRKHEERHIGLHKIYQCRICNKTYDCKSKLTSHQEEKHFGIDNKKIPCEQCNKFFKTRQNLEKHVQAIHEKSLQCECEVCGHVLSNKANLTAHMKRHVDVRPYKCTFAKCGKQFKDKSDLKRHTIIHYPDKQFPCEICGKLFARKRRLDLHLNVHAPKKKSVECEHCGVLFYSKRYLTKHVKMKHTKKKQKYICDLCDFKTHNKPSIVMHLKYGHSGWRDKKCQLCNKDFKKHEYLKLHYLRIHNLRFKMGTIKPEVKPPVVIKEEPLDEEYKEELQPEIDLLEIHKEELKEVKTPEPEFSDSVKDYSNAVFSEDVSHSILEGGSRVTSEPEKEFDGVFIDHDMEKPDVNIIEDPPPDPELETITTYSKKVLSEDISRCLLERDGRQDEGPETEINRIFIDHVTEKPEKLGVVIAKKNISAYKEKYVKKKVKEMLLEISNKKEAAILEEARKQYNTRIEMALRRANKKEHVNIKYFQNKKSEDTTNDITEGDDIAEHNEPVTDDVDNDGDDQTVKNNKIKFNTHQCYICFKLFPTKSNLTEHCKHHFDICNYKMLKKCPYCGYVTNLNIRQHLKIKHDVTLQFPYNKITERNNESGSKYIYEIDKDTALEIIPSIKNLNRLASIKIDERKRHDVNNKIAKTKLIRKGNQWIVDKELIKLSTENILPEFSLDEYAKIKIKGDKYENVLRKLGFLAKKRGLVMLFPCDGCEKICQTLSGLVLHKRKHEINPKAFKPKVWKNRIVKAKNVTKTENLMFNKEDFKNLKVIWNLKLARNLNKGKGLRYDKNVKTADNNQNARNMDSVASNSRNDATNNNVGSNNNTKTTTNIAIKRNRVPNGRNKIENRFAKPKPIVNKHKCDKELMEFYENNIKGADIEFWQFLKIFNKMSRENVNDFKDLEHRSDFGLHFDGSTESSLNDNIESENNLPKEVIKENIAASTTETSRLQFENRIGRLSNKECGNTRILKKVSKINTYRRVLMISKKDRQRRNDIKNQLRRRIEESKITDKN*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -