Basic Information

Gene Symbol
-
Assembly
GCA_905147815.1
Location
LR990630.1:12858467-12860830[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 2.9 8.3e+03 -1.5 0.0 22 33 225 236 222 240 0.81
2 5 7.7e-10 2.2e-06 29.1 0.0 1 45 256 302 256 303 0.95
3 5 4.6e-07 0.0013 20.2 0.1 2 44 310 356 309 358 0.94
4 5 8.3e-11 2.4e-07 32.2 0.0 1 43 362 404 362 406 0.97
5 5 7.6e-05 0.22 13.1 0.0 3 45 414 458 412 459 0.92

Sequence Information

Coding Sequence
ATGGATATGGATTTCGATAGTGATGAAGACACAGAGGTACAATTGAACGATTTGAGGCACCTGACGGCGGTATTAGAGGCAGACGAGGCAAGtacaaatgaaattatttctCGAGGCCCTGCTTCGATCGCAAGTACTTCAAAAAGCACTACCACAACTTCCAACGAGCTGTTCAAAATAGAATCCGCTTTAGCACTTAACAGATTATACGATGAAAAATTGGGACGACTAGAGAAAATACTGAGCGGGCGGTTACGCGATTGCCGAAGTAAACTAAAAGTAATCCAAGGCACGGGAACTAATACCGAAAAACACGAAGTGTTCCGGTACCTCAATTGTGGCAAGCCATATTTCAGAGACAAATCGAATTTCCCAGCTCCAGATAATGATGATACCCTAATGGCTAAATCCCAAATGTATGACTTCTCACAAATAATATCAGTCCCCGGTTGGACAGTCAGAGATAAAAGTCAGTTCATAACTGTCATTCACAAAATGTCACAGGACATCAGAAAAACAGAGCTACGATCAAAGATAGCAGAGTTGAAACGACAAGAAAAATTGAAGAAAgttaaagatattaaaaaacaaattgctGTTTTAGAAGACGAAATTGATAGTTTGAGTATGAAACCTCTCACCCAATTAGCTCTCCCCTTAAGCAAAGAATATGATTGGGATACATTAGCTAACAAATTGAACCGGAGGCACACTGCACAAGAATACCAGGCTCTTTGGAAGTTGTTCTTTCATCCGTCTATTCAAAAAGACAGTTGGAGCAAGACTGAACATGCATCCTTGCAATCTATTGCTaatgaatttaatttacaaGATTGGGATGCAATAGCTAAGAAACTGAACACGGGGAGAACTGGATATCAATGCTTTGTATATTTCCGAACCAACATGGCTAACATCACTACCGGGCAAAAATGGTCAAATGAAGAAGTAGCTTACCTCAAAAGATTAATTGATTATTTCAAACAAGACAATTATATACCGTGGGGTAAAATAGCAGCAGCTATGGAGAACAGAAgtaaaattcaaatttataataaatatttacgacTCATTGAACAGAGAAAGGGTAGGTTCCTCCCTGAAGAAGATGCTGTGATACTTAACTGTGTGGAAAGATTTGGGGAGGACTTTAGGAGGATGACGAATTATCTGCCTGGCAGATCAATGAGCCAAGTGCGGATAAGATATCAGGTACTAAGTCACATGAGAATTTCAACTGTATGGACAGTTGAAGACGACAGAAAACTTGTACAAATCATGAGCAATCAAGATAGTGATATGAATTTTTCCAGTGCCACTAAATACTTTCCTGGCAAGAACAGAATGAACATAAGGTCTAGGTATCTCACATTAAAACGGTGGATGAAGAGGCATCCATACATGGACATTCAAAATGCGCCGCGCCGCGGTGCGCGCCGGTTAAACCACGGCAAAGCCACAGAAGATTTAAACAAAGCTATAGAAAACTTAAAGAATACATTGAAAACTGAAGCTGAAATTAAAACCAGCACAGGGAAGAAAAAAATCACAATGAACTCTACCGACTTTGACATAGAAGATGCAATTATAGCTACATTAATCAATGAAAGACTTAAAGAGGAGGAATGCAAGAAATATACGGATGAGGTAGAAAAAAGTTTTCTTATGACACATGACAATACATCGGCAACAAATACAAAACCATTGACCAATCTGAATAAATGTTTGATTTTCTTAGAATCGAGATTAAATAAAGAACGGTATGAAGCAAGTAATTACAGTGTACAATATCCAGAATTAGGAAAACCAGAACAAGAAATATGTAGAGTTAGTGTTAAATCATATTCTAGGAAGCCAAATACTGATGCCAAAATGAGAACTATAAAAATTGATGGTAGCCCTGATGTGTGGGGTAACTGTATGCTGACTATGAGAAAACTTGCACTTCCTCCCCATTATGCTACAATAACAGGATGCAGAGCTTTAATGGGATATGTTAACAGCACTGGCCATGACAGTATCAATATCCATGCAATGTTAAAACGAAATTGTATATTAAAGGAGCAGTATAATATACTTCTTGATCGCTTCCAAATTCTATTTCTCTGGCCAATGTTACTATCTAATGAACTCCCTGTAAAACATGTGCCATCACCGAAAGTGGTTAAAGTAAAAAGGCCAAATCTACCGTCATCACCTGCTTTTGGTACTAaagttaaaacaataaataagaaatacaaAATGAATGCATCTATAGCTCCTAATGGTATAGATATAATAGACTGCGatcaaaataaagatattacaatcGAGGAAAATATGTGTGGCATGGTTGATACtgaattgaataatatttttaaataa
Protein Sequence
MDMDFDSDEDTEVQLNDLRHLTAVLEADEASTNEIISRGPASIASTSKSTTTTSNELFKIESALALNRLYDEKLGRLEKILSGRLRDCRSKLKVIQGTGTNTEKHEVFRYLNCGKPYFRDKSNFPAPDNDDTLMAKSQMYDFSQIISVPGWTVRDKSQFITVIHKMSQDIRKTELRSKIAELKRQEKLKKVKDIKKQIAVLEDEIDSLSMKPLTQLALPLSKEYDWDTLANKLNRRHTAQEYQALWKLFFHPSIQKDSWSKTEHASLQSIANEFNLQDWDAIAKKLNTGRTGYQCFVYFRTNMANITTGQKWSNEEVAYLKRLIDYFKQDNYIPWGKIAAAMENRSKIQIYNKYLRLIEQRKGRFLPEEDAVILNCVERFGEDFRRMTNYLPGRSMSQVRIRYQVLSHMRISTVWTVEDDRKLVQIMSNQDSDMNFSSATKYFPGKNRMNIRSRYLTLKRWMKRHPYMDIQNAPRRGARRLNHGKATEDLNKAIENLKNTLKTEAEIKTSTGKKKITMNSTDFDIEDAIIATLINERLKEEECKKYTDEVEKSFLMTHDNTSATNTKPLTNLNKCLIFLESRLNKERYEASNYSVQYPELGKPEQEICRVSVKSYSRKPNTDAKMRTIKIDGSPDVWGNCMLTMRKLALPPHYATITGCRALMGYVNSTGHDSINIHAMLKRNCILKEQYNILLDRFQILFLWPMLLSNELPVKHVPSPKVVKVKRPNLPSSPAFGTKVKTINKKYKMNASIAPNGIDIIDCDQNKDITIEENMCGMVDTELNNIFK*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-