Pbuc024697.1
Basic Information
- Insect
- Phalera bucephala
- Gene Symbol
- -
- Assembly
- GCA_905147815.1
- Location
- LR990619.1:31001701-31002159[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-11 2.1e-08 35.2 0.0 2 42 16 56 15 59 0.91 2 2 8 1.3e+04 -2.5 0.0 16 22 131 137 128 137 0.81
Sequence Information
- Coding Sequence
- ATGCCCAGAAATCGCCAAAGAACAACCGCCAAAGCGGCTTGGAACGAAGAAAACCTTAACTCCGCTAAAACTGCGATTGAAAATGGGATGTCCAAGAGACAAGCCGCTAAACAATATAACATCCCATTTACTACTTTAAGGGATCGActaaaaaacgaaaatataagCAACCCAAGATTAGGTCGTAGGCCCATATTCACCCGGCACCAAGAACATGAAATTACTGAACAAGTTAAGCTGCTGGGTTCGCTATATTATAGACTCAGTGTCACAGACTTGCGTAAAGTGGTTTATAAATATGCCGTGCTCaataatatcaaaaacaatTTCAAAGAAAACAGCAAAACCTCTGGAGTGGATTGGGTACACGGCTTTATGCGACGCAACCCCTCAGTTTCTGTTCGCAAAGCTGAAGCAACGAGCTTGAATAGGGTTTCGGCTTTCAATAAGAAGAAATAA
- Protein Sequence
- MPRNRQRTTAKAAWNEENLNSAKTAIENGMSKRQAAKQYNIPFTTLRDRLKNENISNPRLGRRPIFTRHQEHEITEQVKLLGSLYYRLSVTDLRKVVYKYAVLNNIKNNFKENSKTSGVDWVHGFMRRNPSVSVRKAEATSLNRVSAFNKKK*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01173211;
- 90% Identity
- iTF_01173211;
- 80% Identity
- -