Pbuc003514.2
Basic Information
- Insect
- Phalera bucephala
- Gene Symbol
- bab1
- Assembly
- GCA_905147815.1
- Location
- LR990609.1:4026133-4032672[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.8e-17 3e-14 53.9 0.0 1 43 54 97 54 99 0.95 2 2 2 3.3e+03 -0.6 0.4 6 15 201 210 191 212 0.83
Sequence Information
- Coding Sequence
- ATGGAGAGCGTGCCTTCTCGACATTCTGATCAGGAAAGGGTTGGCGTGCCTCCGCATAGCTACCAGTACCAGCTACAATCAATGTGGCAGAAGTGCTGGAACACCCAGACCCTCGTGCACAACTTGCGGTTCCGCGAACGCGGCCCACTCAAGTCCTGGCGACCAGAGACCATGGCCGAGGCTATCTTCTCAGTGCTGAAGGAGGGACTGTCCCTCTCCCAAGCGGCGAGGAAGTATGATATCCCGTACCCGACGTTCGTATTGTACGCCAACCGGGTCCACAACATGCTGGGACCAAGCGCCGACGGCGGGGCAGATTTAAGACCAAAAGGAAGGGGGCGGCCGCAAAGGATCTTACTGGGCGTTTGGCCCGACGAGCACATTCGCGGCGTAATTCGGGCCGTTGTGTTCAGGGACACCCACGCGCCATGTCCCACTCAACCGTCAAATCTTAAAGAGCTCGAACTGCCCGGCTACCCCGCCATCGCACCGGAAGGCGTCGGCGTCGGCGTGGGCGTGGGCGTGGGCGTGGGAGTCCAGAACGCGTACATTGGGTGCGGCAACGGGCGCGAGGGCCGCATGTCGCCGAACgccgccgcggccgccgccgtgGCCGCTGTGGCGCACGGCTTGCGCCGCCAAATGTGCAACATCGTGGCGGGCCAGCGGCCGGACCACCCGCCGCACCTCGGACCCCCGATGCAGTCTTCACCGCAGCTAACGTCGCCGCTCTCTACGGGCCTCGAGTCGCCTCTCTGCTCGCCGCCGCCACCCGGCCACGCCCTGGAGCCCGCGAAACACGCCGACCCTTTCCGCCCATTCGCCTCCCCCACGGACAGCCGCTACGGAGACCGCGACACGTCGTCTGATATCACTGAGATGGGCCCGCCGAAGAACGGGCAAGGTATCGCTAGGAAAGCCCCCGTGCAGGGCGTCTCGCCCTCCGAGCTGGAGCACGCGGCTGAGGGCCGGGCGGACATCTGA
- Protein Sequence
- MESVPSRHSDQERVGVPPHSYQYQLQSMWQKCWNTQTLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGADLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDTHAPCPTQPSNLKELELPGYPAIAPEGVGVGVGVGVGVGVQNAYIGCGNGREGRMSPNAAAAAAVAAVAHGLRRQMCNIVAGQRPDHPPHLGPPMQSSPQLTSPLSTGLESPLCSPPPPGHALEPAKHADPFRPFASPTDSRYGDRDTSSDITEMGPPKNGQGIARKAPVQGVSPSELEHAAEGRADI*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01425864;
- 90% Identity
- iTF_00621941;
- 80% Identity
- -