Pchl009447.1
Basic Information
- Insect
- Petrophora chlorosata
- Gene Symbol
- stc
- Assembly
- GCA_951640565.1
- Location
- OX621195.1:15223703-15247901[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 2 3.3e+04 -4.4 1.6 15 19 547 551 546 551 0.81 2 13 0.071 1.2e+03 0.5 1.7 2 10 579 587 579 587 0.92 3 13 3.9e-05 0.64 10.9 18.1 4 19 595 610 593 610 0.93 4 13 5e-08 0.00082 20.2 11.4 1 18 646 663 646 664 0.97 5 13 7e-05 1.1 10.1 13.2 1 19 705 723 705 723 0.98 6 13 1.5e-05 0.24 12.3 11.3 1 19 764 786 764 786 0.87 7 13 2 3.3e+04 -5.4 2.2 6 10 816 820 816 820 0.94 8 13 0.0031 50 4.9 5.2 1 11 826 836 826 839 0.93 9 13 0.076 1.2e+03 0.4 0.8 4 10 841 847 840 847 0.95 10 13 6e-08 0.00097 19.9 13.6 1 19 853 871 853 871 0.99 11 13 2 3.3e+04 -6.5 15.6 9 18 917 926 910 927 0.79 12 13 2.7e-07 0.0044 17.8 13.3 1 17 963 981 963 987 0.85 13 13 0.023 3.7e+02 2.1 9.8 1 12 993 1003 993 1014 0.76
Sequence Information
- Coding Sequence
- ATGTCTCAGTGGAACAATTCCTACGCATACAACAATCAGTACCAAGGCCCCAACACCTGGAACGGTGACATGAACGGCCAGTTCGTCAATCAGGCATATTACGCTAGACCAGAATCAGGCACCCAGGCACAATATGTGAGCTTTAACGAGTTTCTTAACCAGATGCAGAACACCAACGCTGTGGCGGGAAACGCAGCTAACTACAACAATGTGCAGTACGAGGGATACCCCACCAGACAGTACAGCTACCAGAACTTACCTTCTACTTCCCAAACTCAGCTCAACAACTACAACTTTCCAACGGTGCCTGCCAACATGCCCAATGAAGGGAACACCTACCAAATGAATGTGCAAAGTCAGTACAATCATCAACCAGATTCCAATTCTTATACTAGTGAGATGATTTTAAATTCCAACCTTACGCCAACAGCGACTGAGTTTGTGCCAAAAAGTTCTATTCCACCGCCTGCAACCAGCATTCAGAACATTCCAGAAGCTTCTAACAGTCAAAATGTTGCAATTGCAAGTGACCCTCAAACAAGCGTTCAGAAAAAAGCTGGAGGTAGGTCATCTGATAAAAATTGGAGGGAACGGCCACAAAATTCACAACCCAGTGAAGCAAAAGAGAAGGCTGTTGTAAAAGAGAGTGGCTTGCCATTATCACATGAGGATAAATTCCATGGAAATAATTACAGAAACCGTGATGCATATCATCGAAATAATGAGCCTGATGGCCGTcattatgaaaataaacaaaatcaagatACTGGTAATCGTGATAATGAATCTGTAGCACAGAATCAAGTGTCTAGTAGTCGCAGTAACACTAACAGTCGTAACAATGAATCTAGTAGTCATGAATCCAATAACCGTAATTGTGAGCCTCGTGGTCGCAACTATGAATCTGGTAGTCGCAGTTATGAGTCCAACAGCCGTAACCATGAGTCTAACAGTCGGAACCAAGATCCTAACAGTCGCAACTATGACAATAGTAATCGTAATACAAGAAGTAGAAACTACGAATTGATTCGTAATCAAGAATTTAGTAGAAACCAAGAAACTAGTAACAGAAATCAAGACTCAAACTCGCGTAATTATGAACCGAACAACCGTAATGAAAGAAGGAATCAGCAGAAAGGTAATAAATTCAAGGGGAAAGATTCAGACAACCTGACTTTCTACAACAGTTCCATGGGAAAAGATCAAGATGCCAGAGAGGCAAGAGAACCCAGAGGTGGAAGGGGCGAGGGCAGTGGAAAAAACAGAAACTGGGTAGGCAGTCAAAGACTGCGAGGATCTGATCGTAACAATGTGGAAGATGAACAGTATGCCAGCAGCTACATGCCGCAGAAAGATGAAAGGGTAGAGAAAGAAAGGGAAAGGGCTCCTAGAGCACAGAATGTAGCCAGTCCTGTCAGATTTCGAAATAAACAACAAGGGGACCAAGTAAACAAAGAAATGACACAACGAGAACGGCTCACAGAGCAACTAGATAAGGGTGCACTGGAGTGCCTTGTGTGCTGCGACCGAGTCAAACAGATGGATCCGGTGTGGTCATGCAGTAACTGCTACCATGTCCTGCATCTACGTTGTATACGGAAGTGGGCTATGAGCAGTATGGTTGAGGGTAAATGGCGGTGTCCGGCTTGCCAGAATTCAAACGACACCATCCCCACGGAGTACAGATGTATGTGCGGCGCGATCCGCTCGCCGGAGTACCAGCGCGGGGCCAGCGGCGCGCACACGTGCGGAAAGTCGTGCAAGCGCGCCCGCGCGTGCCCGCATCCGTGCACGCTGCTGTGCCACCCGGGGCCGTGCCCGCCTTGCCAGGCTACTGTCACCAAGCAATGCGGCTGCGGCGCCGAGACCCGTTCGGTGATGTGCAGCAGCAAACTGGCGCAAGTGTGTGGCCGCGTGTGCGGACGCAGCTTGGAGTGCGGCGCGCACTACTGCGCCAAGGAGTGCCACGAGGGACCCTGCGATACTTGCAATGAGACTGTTGTACAAGTGTGCTACTGCCCGGCTGCCGCGGAGCGCACGCTGGCGTGCACGCGCGAGtcgggcgcgcgcgcggcgtgGTCGTGCGCGCGCGCGTGCGGGCGCGTGCTGGCGTGCGGCGCGCACGTTTGCCGCGCGCCGTGCCACGCGCCGCCGTGCGAGCCGTGCCGCCTGCTGCCCGCCGCCGTGCTCACGTGCCCCTGCGGGAAGATGAAACTAGAGGCGGACAAGCGCAAGTCGTGCTCGGACCCGATCCCGCTGTGCGGCAACATCTGCGCTAAGCCACTGCAGTGCGGGCCCGCCGGGGACAAGCACTTTTGCAAGCTTGACTGCCATGACGGTCCGTGCCCGGTGTGCCCCGACAAGACGCTAGTGCAGTGCCGCTGCGGGCACTCGAGCCGCGAAGTGCCGTGCGCTGATCTGCCCGAAATGCTCAACAACGTGCTGTGCCAGAAAAAGTGCAACAAGAAGTTGTCGTGCGGACGGCACCGCTGCCGCACAGCGTgctgcgcggcgccggcgcaccgCTGCGCCGCGACGTGCGCGCGCTCGCTGGCGTGCGGCGCGCACCGCTGCGAGGACTTCTGCCACACCGGCCACTGCGCGCCCTGCCCGCGCGTCAGTTTCTCTGAGCTGACGTGCGCGTGCGGCGCGCAGGTGATGCACCCGCCAGTGCGGTGCGGCACGCGCCCGCCCGCGTGCGACGCGCCGTGCACGCGCGCGCGCGCATGCGGGCACCCCCCGCACCACAACTGCCACTCCGACGAGTGCCCGCCGTGCGTCGTGCTCACCACCAAACGGTGCTACGGAAACCACGAGGAGCGCAAGACGATCCCGTGCTCGCAGGAGGAGTTCTCGTGCGGCCTGCCGTGCGGCAAGCCGCTGCCCTGTGGCAAGCACGCATGCATCAAGACCTGCCACAAGGGACCTTGTGATACTGGCAAATGCACGCAGCCGTGCATGGAGAAGCGACCGTCGTGCGGGCACCCGTGTGCGGCGCCGTGTCACGCGGCGCGCGGCTGCCCGTCGGCCGCGCCGTGCCGCCGCGCCGTGCGCGCCGTGTGCCCCTGCGGCCGCCGCAGTGCTGAGCGGAGCTGCAACGATAACGCGAGGGATTATGCTAAAATGATGAGTGCCCTGGCCGCAACGAAAATGCAAGAGGGCGGCTCGGTTGATTTGTCCGATGTACACCGTCCCGGAAATATGCTCAAAACGTTGGAGTGCGACGACGAGTGCCGCGTAGAGGCGCGCACGCGGCAGCTGGCGCTGGCGCTGCAGATCCGCAACCCCGACGTGTCCGCCAAGCTCGCGCCGCGCTACAGCGACAcgctgcgcgccgccgccgcgcgcgaccCCGCGCTCGCGCACCACACGCACCTCGCGCTCACGGACCTCGTGCAGCGCGCCAAGAAGTCGAAGCAGAAGACCCGGTCGCACTCGTTCCCATCGATGAACTGGCAGAAGCGGCAGTTCATCCACGAGCTGTGCGAGCACTTCGGCTGCGAGAGCGTCGCGTACGACGCCGAGCCCAACCGGAACGTCGTCGCCACCGCCGACAGGGAGAAGTCGTGGCTGCCCGCGATGAGTATCCTGGAGGTGCTGGCGCGCGAGGCGGGCAAGCGGCGCGTGCCGGGGCCCGTGctgcgcgcgccgcccgccgccgcgcccgccgcgctctccgccgcgcccgccgccaccgccggcTCCGCCAAGTCTTTCGGCGGCTGGGCCACGCTGACGTCATCGAACGCGTGGGCGGCGCGCAGCcagccgcgccccgcgcccgcccccgcgccttcgcccgcccccgccgccgcccccgccccctcCGGACCGGACACCCGGATCGACTACTTCGACAACCCGCCCGACAACTAA
- Protein Sequence
- MSQWNNSYAYNNQYQGPNTWNGDMNGQFVNQAYYARPESGTQAQYVSFNEFLNQMQNTNAVAGNAANYNNVQYEGYPTRQYSYQNLPSTSQTQLNNYNFPTVPANMPNEGNTYQMNVQSQYNHQPDSNSYTSEMILNSNLTPTATEFVPKSSIPPPATSIQNIPEASNSQNVAIASDPQTSVQKKAGGRSSDKNWRERPQNSQPSEAKEKAVVKESGLPLSHEDKFHGNNYRNRDAYHRNNEPDGRHYENKQNQDTGNRDNESVAQNQVSSSRSNTNSRNNESSSHESNNRNCEPRGRNYESGSRSYESNSRNHESNSRNQDPNSRNYDNSNRNTRSRNYELIRNQEFSRNQETSNRNQDSNSRNYEPNNRNERRNQQKGNKFKGKDSDNLTFYNSSMGKDQDAREAREPRGGRGEGSGKNRNWVGSQRLRGSDRNNVEDEQYASSYMPQKDERVEKERERAPRAQNVASPVRFRNKQQGDQVNKEMTQRERLTEQLDKGALECLVCCDRVKQMDPVWSCSNCYHVLHLRCIRKWAMSSMVEGKWRCPACQNSNDTIPTEYRCMCGAIRSPEYQRGASGAHTCGKSCKRARACPHPCTLLCHPGPCPPCQATVTKQCGCGAETRSVMCSSKLAQVCGRVCGRSLECGAHYCAKECHEGPCDTCNETVVQVCYCPAAAERTLACTRESGARAAWSCARACGRVLACGAHVCRAPCHAPPCEPCRLLPAAVLTCPCGKMKLEADKRKSCSDPIPLCGNICAKPLQCGPAGDKHFCKLDCHDGPCPVCPDKTLVQCRCGHSSREVPCADLPEMLNNVLCQKKCNKKLSCGRHRCRTACCAAPAHRCAATCARSLACGAHRCEDFCHTGHCAPCPRVSFSELTCACGAQVMHPPVRCGTRPPACDAPCTRARACGHPPHHNCHSDECPPCVVLTTKRCYGNHEERKTIPCSQEEFSCGLPCGKPLPCGKHACIKTCHKGPCDTGKCTQPCMEKRPSCGHPCAAPCHAARGCPSAAPCRRAVRAVCPCGRRSAERSCNDNARDYAKMMSALAATKMQEGGSVDLSDVHRPGNMLKTLECDDECRVEARTRQLALALQIRNPDVSAKLAPRYSDTLRAAAARDPALAHHTHLALTDLVQRAKKSKQKTRSHSFPSMNWQKRQFIHELCEHFGCESVAYDAEPNRNVVATADREKSWLPAMSILEVLAREAGKRRVPGPVLRAPPAAAPAALSAAPAATAGSAKSFGGWATLTSSNAWAARSQPRPAPAPAPSPAPAAAPAPSGPDTRIDYFDNPPDN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -