Basic Information

Insect: Petrophora chlorosata
Gene Symbol: -
Assembly: GCA_951640565.1
Location: OX621191.1:6697241-6706156[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.1 9.5 7.7 3.9 1 23 84 107 84 107 0.98

2 19 3.6 3.2e+02 2.9 4.3 1 23 190 212 190 212 0.97

3 19 0.0019 0.17 13.2 1.0 2 23 218 239 217 239 0.97

4 19 2.3 2.1e+02 3.5 1.5 1 23 245 267 245 268 0.94

5 19 0.13 11 7.5 4.3 2 22 500 520 499 520 0.95

6 19 5.4 4.9e+02 2.4 0.4 1 20 617 636 617 639 0.70

7 19 0.38 34 6.0 0.4 2 23 770 791 769 791 0.96

8 19 0.083 7.6 8.0 1.0 3 23 874 894 873 894 0.98

9 19 0.034 3 9.3 0.5 1 23 902 924 902 924 0.97

10 19 0.13 12 7.4 3.4 1 23 964 986 964 986 0.95

11 19 0.00026 0.024 15.9 4.0 1 23 994 1016 994 1016 0.99

12 19 0.33 30 6.1 0.9 1 23 1178 1200 1178 1200 0.96

13 19 0.13 12 7.4 0.0 2 23 1207 1228 1206 1228 0.96

14 19 0.03 2.8 9.4 1.6 1 23 1294 1316 1294 1316 0.94

15 19 0.016 1.4 10.3 0.9 1 23 1322 1344 1322 1344 0.95

16 19 0.0073 0.66 11.4 2.6 1 23 1434 1456 1434 1456 0.97

17 19 0.00018 0.017 16.4 1.4 1 23 1462 1484 1462 1484 0.99

18 19 0.34 31 6.1 2.0 1 23 1575 1597 1575 1597 0.96

19 19 0.0032 0.29 12.5 3.7 1 23 1608 1630 1608 1630 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.1	9.5	7.7	3.9	1	23	84	107	84	107	0.98
2	19	3.6	3.2e+02	2.9	4.3	1	23	190	212	190	212	0.97
3	19	0.0019	0.17	13.2	1.0	2	23	218	239	217	239	0.97
4	19	2.3	2.1e+02	3.5	1.5	1	23	245	267	245	268	0.94
5	19	0.13	11	7.5	4.3	2	22	500	520	499	520	0.95
6	19	5.4	4.9e+02	2.4	0.4	1	20	617	636	617	639	0.70
7	19	0.38	34	6.0	0.4	2	23	770	791	769	791	0.96
8	19	0.083	7.6	8.0	1.0	3	23	874	894	873	894	0.98
9	19	0.034	3	9.3	0.5	1	23	902	924	902	924	0.97
10	19	0.13	12	7.4	3.4	1	23	964	986	964	986	0.95
11	19	0.00026	0.024	15.9	4.0	1	23	994	1016	994	1016	0.99
12	19	0.33	30	6.1	0.9	1	23	1178	1200	1178	1200	0.96
13	19	0.13	12	7.4	0.0	2	23	1207	1228	1206	1228	0.96
14	19	0.03	2.8	9.4	1.6	1	23	1294	1316	1294	1316	0.94
15	19	0.016	1.4	10.3	0.9	1	23	1322	1344	1322	1344	0.95
16	19	0.0073	0.66	11.4	2.6	1	23	1434	1456	1434	1456	0.97
17	19	0.00018	0.017	16.4	1.4	1	23	1462	1484	1462	1484	0.99
18	19	0.34	31	6.1	2.0	1	23	1575	1597	1575	1597	0.96
19	19	0.0032	0.29	12.5	3.7	1	23	1608	1630	1608	1630	0.98

Sequence Information

Coding Sequence: ATGCTACAGCAGATGTCCTCGCCGCTGAGCGCGCAAGTCGGCGAGGTCACAGCTATCGCGCGCCCCCTCGAAGGCCGCCTCTGCGTGGACGTCCTCTCGGAGGCCTCGTCCGACGCGCCGGAAGATTTTGAATTGCCGCACTGCAAGATAAGGAGGAACTATAACTGTGCGAAGTGCACGTTCTATACGCAAAACCCGCGCGCTTATCTGTTGCACACGCGCGACGTTCATTTTGGAAAATTCAAGATATATGAGTGTCAGCTTTGTTTATATGCCTCGCGACACCACCAGAAGCTCCTGAGACATATGAAAATGGTGCACGGAGGATCACCCCTACCATCGGCCTCGGCCGCCAGAGTGGACCCGGAACCTCTCGCCAGAGCAGAAGTCGAACCACCGACTCCAGATAACACCGCAGAGATAGAGCGAATGGAAGATTTACTCGAAGAGATCGAAGAATGCGTAGACATGCAAATGGACGACGACGGCGAAGACCAGTCCGAACGGGCTGACGACTCCGACGCTAGAGGTGTGAACCCCTCAGGACCCAAAGGAAAGAGTAAATTTTTCTCGTGTGACAAATGCAACTACGTCACGCACTTAAAGGCGCGATACACTAAACACGTTAAGTACCACTCGATGCCGATGATCAAGTGCACGATGTGCGACTTCCGCACTCCATACAAATGGAATTTGGATCGCCACATGAAGAACCACGGTGGGACGGGAAGCTTCGTGTGCTCGAAATGCACCTTCACAGCGGACATCAAGCAGAGTCTGACCGTGCACGAAATGAATCATCACACACCGCCGGTGGGGCACGTCGCAAGCCGCCGCCGCAACCGGGTAGGCGCCAGTGACTTGACGGCCGCCGACCCGATGGGCACGCTGCTCCCCAAGGAGGAGGAAGGGAGCGGCGACTCGCGCTCCTCACACTCGGCCTCGGACATTATGGGCTTACAAGACGCAGAAAGAGAAATAGTCAGCTGCAACAGCGATTCAAATGATGCCAGTTCTACACACGCTGACTCCAATAGAGAAGGGTCACACGACGCGCTCGGCCAACACTCTCCGAGCTCCGCGACCGACGACTCAAAATCACAAAAACAAAGCAGGAAGGCCCCCCGGCCCATACCTCAACTGATCCCGCTAAACGCGTCAACTCCCAATCAAAAAACATCCGGCGAACCGCCAGCAAAGAAGTTCAAAGAATCATGCTCTGAATTATTCGGAACATTCGAAAACTTGCCGGAGGATATTACCTTAATACCCGTAAACAATTATCCAGCCAAAGAAACCACAGTTCGTAAGAAAAATAATTCGTTTTTTGACAAATTAAAAGAAAGGCTTTTGACCGAAACTGGAGAAGAAGGATCGCTGAAATGTAAAAACTGCGGTTTTGAAAGCAAATGTCTGTCGGAACATTCCGTGCATGAGAAAAATTGCGCCACCCCGGCCAACCGCATCACGATGGCGCTTCCAACTATGGGCTCTACTCGTTGCCAAAACTGCAGGCATAGATGTAAATCTAGTGCGGACTTGAAAATGCACATGCAGACTTGTGGTAAGAAAGATAAAGTTTCTACTGAAAACGTTACAGACACCAAACCTAACCAAGCTTCAACTTCGCAATATGAAAAAGAAGCGGAACCTCATCCGATGGAAAACGTCGTTTTTGTCTGGAATAACATCAACCAGGAATCGAACAAGTTCGACAGACCATTAGACATCAACATTAATGATGATTCAACACTTACTGACCTAAATAGACATTACGACACCGAGACCGTGGACGAGAGTGAGGGCATGAACTTATCACCAAACAGTTTGAGCCTCGGCAAGAACGTTTACAAATGTCCAGATTGTAAATTCTGGGCGGCCACCGCGTCCCGGTTTCACGTGCACATTGTCGGTCACTTGAATAAGAAGCCTTTCGAATGTTCGCTATGCAAGTACAAGTCCAATTGGCGGTGGGATATAACCAAACACATTAAGTTGAAATCAGCTAGAGACCCGGAACACAACGACGCTAAGGTACTGATGACAGACGAAACCGGCAGAAGAAACTACAGCAAGTACAACAAGTTCCTAGCTGTGCCAGTTTTGAATGAAAATGGCGAGAACGAGTTCCACTACATAGACCCGATTACAGCGGTCGACGGGTCAATGGAAGTGGATGAAGCTACGGACTTGATGCACGTGTCGTATGAGATGCAACCGTTGAACCTCCAGACTCAGCCCGGTGATAGATATAACATTATGGACAACAGGAATCAAGACCCTAAAAAACCTAAGAAGACTTTGTGGAAATgcaaaaaatgcaattacaaGGATCCGTCGAAGGATGCGTTGTTGGAGCACGTCAGACAACATTCCAGAGAGGGCGGACCGGACGAGACCCCTCacagtaacagtaacaacaAGAAGCTAGAAAACGCCCCTGATCCCGCGGACTTAGCGTACCGCTGCGGACACTGCAATCAGCTTTCTAACTGGAAACACGTCATAcagAGACACTGCCGTTTGAAGCACGATGGAATCATCAAAGTTATTACCACAGTGAAACCGAAACCAGATATGTCTCTCGTACCAGGCGGCGAAGGCGCATACAGTGATCTTTGCACCAAGTGTCCGTTCAAGGCCAACGACAAAAAGCAGCTCCAAGAACACTTGCAGCAACACCAACCTTCATCGGAATCTATCTTCAAGTGCTACTTCTGCCCATACTTTGTGAAAGATGAACAAGATTTGATCCAGCATTTGCTGTTACATGGAATAACTGACCCGGAAGATTATATCTCCAAAGCGATGGGTTGCCGGTCTCCATTACCCGATCGGATTCTCACCCATGCCGAAATACCGCCTCCATCGAGTAGTGTAACGAAACGCCACAAGTGTACTGAATGCCCTTACGAAACAAACAGCAAATCTCAGTACATGTACCACGAACAGTTCCATCGGCTTCCGGCAGACACCCCCTACAAATGTCCAGAATGCAACTATAGCGTATCGAAGAGGCACTTGCTTCATCAACACTTGAGAGTGCACGGAATTCATCCGTCTTCGGATCGCAAGAAACATGAATCGGAGGCAGATTTAGAAGCTAACACGCCTTGCCAAAGCAAACCAGATAGTAAATCTGACGTGGCTGAAGAAATTCCATTTGTGTGGGTCTCAGCGAGGAACGAATTCCACAAAATGTATAAGTGTCGCTATTGCTCTTATGTAAATTCTCAGAAATGTAAGCTACCTAACCATGAGAAGATTCATTGCCTTGAATTTGAAAATAGCGACGTTATAATTTACAAATGTTTGGAGTGTAAATTTACATGTGATGACGCCGAGAAAGGTGCAGAACATTCCAAAAAGCATGGCCTGTTGTACGGTCGCATCTATAGTTATGTAGAGGACGATCTTCCAGATGAAGACCAAATATCTAAACTACGCAGAGTCATTGAACAAGAAAAGGCCTTGGAAGAATCTACAAAAGAGGACGGTTCTGCAACTGATCaatcagaaaataaaattatgtattattgtcAGAAATGTCCAGCcaattattttactgaaagtGAAATTAAAGTACACGAGAAGTTTCATGATCTCACTCTGGAGAACAAATGCAAAATCTGTGAGTTCTCGGTACCGGATGAGGTGGAATTGGCGGCTCACGTTGCTGTACACTCGGATGATTACCACATCAGAACAAATATGTACAAATTCGTTCACAACTATCACTCCCTTTATAAACCACCTCGCCTGGAATCAATCCGGCAGCCTGATTCTTCAGAAATTACATGGATAGCTATAGCGAACAAACAAATTGAACACCTAGAGCCAGTTCATAAAAAGTTCGAATCAAAACACACACCAAAACAATATCATTGCAAAGAATGTCCGGCCAAATTCTTTAAGAGTTCGGCGCTCTCATATCACCTGGGATTACATGGCGGAGAAGGCGAACATAAATGCAAGAAATGTAGCTATGCCGTCAAAAACGTTGGTAATTTAGCCAAACATGAAATTTTGCACGAAATCGAAAACAAGCCTACGGGTTGCGATTACGACTCCGGTGAAGATATGGATTACAAAAATATTCCACTCTCTGGGACAGATTTGTTCCAAAGAAAGACTGAAGCTCTAAAAAGAGTATTGACTGACAAAGATAAATTGGTCAAGCCAAATGACCACTTTCCGCCTGTACTCCAGGCCGATCCACAGTTCGGTTATCTCATGCACGGTAATCCGGAATTCATATATCCGACGTATTTAAAAAACGGACGCCAAAAAGAGAAAAGGTACAAATGCCACAAATGCCCGTCCGCTTTCGAGAAGAGAGAACagtataaaatacatttgtCACTCCACGGTTCTAAACAGCGATATAAGTGCGAACTATGCGACTACTCTGTAAAGTATTACGCTAACTACGTCCAGCATATGAGGAAACACCAAATGAACGATGAAGCTCAGGCTGAAAGAAAAAAGGGCAGTAACGATTTTGCAGAACCTGACAATCAAGACGTGAAACAGGAAGATAGCGCAGATAACATCAAATTAGCGATCAAAACCATGCCCAAAGGCGCACCTAAGACAGATTTCCAGCAATTCTCTATAAGAGACCAGCAGACTCTAAGGCTTTTACAGCGGAGGAGATCCATGACTACCGGCGGAAAAGATGCGTGCTCTACCGAAACTTCACCGACTAAAGAACGCAAATTGCACATGTGTCTACTGTGCCCATACACGAACCAACGACAGGATGCCCTCAACAATCACTACAGGAGACACGATGGCGCCGACATTCTCAACATTGGAAATCATAAATGCTCCTACTGTGACCTAGTCGTGGTTCAATCACATTTCCTACGGGACCATTTAAAGACTCATTTCAGCTATCACAAAACTCTGACTCCTGAATGTTTTGTAGCTAACGAGAACGTGactttcaatataaataaagtggACGAAGAAGGCGAACCTCTAGATCTCAAATTAGACGTTAAAGGCAAAATTATGTTCAATGAAGAAAGgatatttgtaaatataaaaactggAGAACTTGTTGTAGAGTAA
Protein Sequence: MLQQMSSPLSAQVGEVTAIARPLEGRLCVDVLSEASSDAPEDFELPHCKIRRNYNCAKCTFYTQNPRAYLLHTRDVHFGKFKIYECQLCLYASRHHQKLLRHMKMVHGGSPLPSASAARVDPEPLARAEVEPPTPDNTAEIERMEDLLEEIEECVDMQMDDDGEDQSERADDSDARGVNPSGPKGKSKFFSCDKCNYVTHLKARYTKHVKYHSMPMIKCTMCDFRTPYKWNLDRHMKNHGGTGSFVCSKCTFTADIKQSLTVHEMNHHTPPVGHVASRRRNRVGASDLTAADPMGTLLPKEEEGSGDSRSSHSASDIMGLQDAEREIVSCNSDSNDASSTHADSNREGSHDALGQHSPSSATDDSKSQKQSRKAPRPIPQLIPLNASTPNQKTSGEPPAKKFKESCSELFGTFENLPEDITLIPVNNYPAKETTVRKKNNSFFDKLKERLLTETGEEGSLKCKNCGFESKCLSEHSVHEKNCATPANRITMALPTMGSTRCQNCRHRCKSSADLKMHMQTCGKKDKVSTENVTDTKPNQASTSQYEKEAEPHPMENVVFVWNNINQESNKFDRPLDININDDSTLTDLNRHYDTETVDESEGMNLSPNSLSLGKNVYKCPDCKFWAATASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSARDPEHNDAKVLMTDETGRRNYSKYNKFLAVPVLNENGENEFHYIDPITAVDGSMEVDEATDLMHVSYEMQPLNLQTQPGDRYNIMDNRNQDPKKPKKTLWKCKKCNYKDPSKDALLEHVRQHSREGGPDETPHSNSNNKKLENAPDPADLAYRCGHCNQLSNWKHVIQRHCRLKHDGIIKVITTVKPKPDMSLVPGGEGAYSDLCTKCPFKANDKKQLQEHLQQHQPSSESIFKCYFCPYFVKDEQDLIQHLLLHGITDPEDYISKAMGCRSPLPDRILTHAEIPPPSSSVTKRHKCTECPYETNSKSQYMYHEQFHRLPADTPYKCPECNYSVSKRHLLHQHLRVHGIHPSSDRKKHESEADLEANTPCQSKPDSKSDVAEEIPFVWVSARNEFHKMYKCRYCSYVNSQKCKLPNHEKIHCLEFENSDVIIYKCLECKFTCDDAEKGAEHSKKHGLLYGRIYSYVEDDLPDEDQISKLRRVIEQEKALEESTKEDGSATDQSENKIMYYCQKCPANYFTESEIKVHEKFHDLTLENKCKICEFSVPDEVELAAHVAVHSDDYHIRTNMYKFVHNYHSLYKPPRLESIRQPDSSEITWIAIANKQIEHLEPVHKKFESKHTPKQYHCKECPAKFFKSSALSYHLGLHGGEGEHKCKKCSYAVKNVGNLAKHEILHEIENKPTGCDYDSGEDMDYKNIPLSGTDLFQRKTEALKRVLTDKDKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQMNDEAQAERKKGSNDFAEPDNQDVKQEDSADNIKLAIKTMPKGAPKTDFQQFSIRDQQTLRLLQRRRSMTTGGKDACSTETSPTKERKLHMCLLCPYTNQRQDALNNHYRRHDGADILNIGNHKCSYCDLVVVQSHFLRDHLKTHFSYHKTLTPECFVANENVTFNINKVDEEGEPLDLKLDVKGKIMFNEERIFVNIKTGELVVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00927143;
90% Identity: -
80% Identity: -