Basic Information

Insect: Petrophora chlorosata
Gene Symbol: -
Assembly: GCA_951640565.1
Location: OX621200.1:14500128-14512590[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 1.9 1.7e+02 3.8 0.1 3 23 112 132 110 132 0.95

2 16 0.011 1 10.8 0.2 2 23 136 158 135 158 0.93

3 16 1.1 1e+02 4.5 2.3 3 23 377 398 375 398 0.94

4 16 0.0055 0.5 11.8 0.7 2 23 437 458 436 458 0.94

5 16 0.13 12 7.5 2.6 1 23 506 529 506 529 0.94

6 16 5.8 5.2e+02 2.3 0.5 2 23 603 625 602 625 0.87

7 16 0.043 3.9 9.0 0.6 1 23 630 653 630 653 0.96

8 16 0.00041 0.037 15.3 1.7 1 23 659 681 659 681 0.97

9 16 0.0031 0.28 12.6 0.6 1 23 688 710 688 710 0.98

10 16 9.3e-05 0.0084 17.3 2.3 1 23 715 737 715 737 0.96

11 16 0.008 0.73 11.2 2.1 1 23 743 765 743 765 0.97

12 16 1.6e-06 0.00015 22.9 1.2 1 23 771 793 771 793 0.98

13 16 0.00062 0.056 14.7 2.3 2 23 800 821 800 821 0.97

14 16 0.0013 0.11 13.8 0.2 2 23 831 853 830 853 0.97

15 16 0.00033 0.03 15.6 3.9 1 23 858 880 858 880 0.99

16 16 0.36 32 6.0 4.9 1 23 886 909 886 909 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	1.9	1.7e+02	3.8	0.1	3	23	112	132	110	132	0.95
2	16	0.011	1	10.8	0.2	2	23	136	158	135	158	0.93
3	16	1.1	1e+02	4.5	2.3	3	23	377	398	375	398	0.94
4	16	0.0055	0.5	11.8	0.7	2	23	437	458	436	458	0.94
5	16	0.13	12	7.5	2.6	1	23	506	529	506	529	0.94
6	16	5.8	5.2e+02	2.3	0.5	2	23	603	625	602	625	0.87
7	16	0.043	3.9	9.0	0.6	1	23	630	653	630	653	0.96
8	16	0.00041	0.037	15.3	1.7	1	23	659	681	659	681	0.97
9	16	0.0031	0.28	12.6	0.6	1	23	688	710	688	710	0.98
10	16	9.3e-05	0.0084	17.3	2.3	1	23	715	737	715	737	0.96
11	16	0.008	0.73	11.2	2.1	1	23	743	765	743	765	0.97
12	16	1.6e-06	0.00015	22.9	1.2	1	23	771	793	771	793	0.98
13	16	0.00062	0.056	14.7	2.3	2	23	800	821	800	821	0.97
14	16	0.0013	0.11	13.8	0.2	2	23	831	853	830	853	0.97
15	16	0.00033	0.03	15.6	3.9	1	23	858	880	858	880	0.99
16	16	0.36	32	6.0	4.9	1	23	886	909	886	909	0.95

Sequence Information

Coding Sequence: ATGGCTTCAGATGATTCTGAGGACGAGCCTCTGTCCGTTTTGGCAGCGTTAAAGAAACGAGATAATTTAGGGCTTGAAATATTACCGGTGTTCGAATCAGCAGAAGGATCCACCGAAACAAAGTCTGTAAAAAAGTACTGTGATGTGTCAATAGAGCTGCAACCCTTAGTGGGAAATGCAATAACGCCTAAGGTGGAAAGGCCTGCGGATGTCTGGTTGTATATGACAGAGCTGAAGCAAACTGGGCCGTATAGCTGCTTACTCTGCTCAGAGTGGTTCATAAATAAAACCAGAATTGTAATCCACTATATAGTAGATCACAAGAAAGATTTCTGTGGGATCTGCAGGTATTTTGTGCCAAACAGAGAAGCTTGGTGGGAGCACCTTAAATTCCACATGCCATGGAAATGCTCACAGTGTGAAGAAAGCTTCATGTCACAAATAGCTTTGCGTGAACATTTTAGTAGTGTTCATAAACTTGTTCACTGTCGTCTGTGCCACTTGCGTCTACCTGATGATGAGCAGTATCGTAATCATCTGTATCAAAAACATTGCATTACAACATTTGCAAGTATTTATGGGGAGACTTTCTGGGATTTTGAGTATGAAGGCAGCCAAAAATTCTTATGCTTACTGTGTTCAAAATCTATCAGCGTGGGTCGAGCATTTGCTGATCATTTTATGGCATATCATCACTTGACTCTGAAATGTTTTGCGGTCGTCCTTTCTGGTACTGATTTACCATTCAGCATTAAGGGTGTAGACTTGTCCtcagattttatttatacacaGTTGAAAGATTACAGTAGTTACGGCTATGTCGACTTTgtacaaaatatgaaaattgAGCCAGAACCTGTTCATGATGAAGTTACAATAACAGTTGATTGTGATCCAGGAATTAAAGAGTCTATTCTCATTCATCAAGAGCAAAATTTTAAGTTCAATGAGGATATAAAAGGTTATAGAGGAGATGAAGATTTTGACATCACCCTTATGGAGTTGGTTACAATGCAGAAATGTTACTTCAAGTATCTAAATGAAACGCTCCACAACATATGCTCTAAAGTTATGCCGCAGTCCTCAAACATTACTTACGTAAATGCTGACGGGTTACAAAAGATAAACTGCTGCTTGTGCAAAGACGTATTTAAAACTGTAAATACATTTGAGACACACATGACCAAAGTgcattgtttaaaaatattgccGTTATATTGGTGCAGAGTGTGTGCTGCAGTTTTTGACAGCATAGATAAACTAGAGGGCCATTCCAAACAAGAACTCGGAGAATTTGAAGATCTGTGGATATGTCAGTTTTGTGACAAGGAGTTTGATACTAGAGAGGACACACGAAAACATTTGACTGAGCATTGGAATGTGCTAGAGTATGACAATTGCTTCAGTCCACATTTGGGGTTCAAATGCAAGTTTTGTCCAACTCTCTTTTGGAACGAGACTGATAGAGAGGCTCACCATGTTAGGGTGCATTTCCAAACGCACATAAGcgatttttataaatgtacaaGTTGTCGAGAAGTATTTGGTGACAAGgtttttttcattcatcattACCTCGAGAAACATAGCAGCAACAATCCTTCATATCTCCTCAAATGCAGTTTGTGCAGCATCGTACTGCATACTGTAGAGGAAATGCGGTGTCATTTTGAAGCTGGTCACCCTGAAGCTAGGAGGTTATTCTGCTCCTTGGACCCATGTAAATTCAAACCTTTCAGTCATAGGAAGTCATTCCTCTTGCATTTAAAGGGCATGCACGACCCGGCCGCCCGGCCGCCGCGCACTACGTGCCTGGTGTGCGGGCTAGAGTTCGGCAGCGCGAAAGCTTGTACTTTACACACGACTATGGCACACGGTCCCGGCAAGTTCAAGTGTACGATATGTAATGAAATGCTGCAAACTAGTGATGAGAGGAAGATCCACTACCTAATCCGTCACCCAGGCCGTTATCAGTACCAATGTGACGCTTGCGATAAGTCCTTTCAATATAAATCATCGCTCTACATGCATAGACAAGACCACTCACCTAATAAGAAGGATTTTACCTGCGGCTTCTGTGGAAAAGTGTTTTTGAAAAGGGATTCGTACCGGGAACACGTAATGATCCACCAAGCGCCGCGCCACGCTTGCTCCTACTGTCCCATGCGCTTCGTGCAGCGCTCCAACATGCTTCGCCACGAGCgcagacacacaggagagaggCCTTACGCCTGCAAGTTCTGTCCGAGAACCTTCGCCGACAAGGGAGCTTGCACTTCCCATTCTAGGACTCATCTCAAAAATACGTCGTATGCGTGCGTGTATTGTGGCCAAACATTCGTGCAGAAGTCCAAGTTGACGTATCACATTCGGAAACACACCGGTGAAAATCTAGAAACGTGTTCGCTCTGCTCAAAGATATTCACGAGCGCGTGTTCGTTGCGGGAACATTTGAAAGTGCATCAGAGGAAGAAGATGAAGAAAACCGTCAAGTGTCCACTTTGCAAAAACATGTACCCAGATGAGAAGGATATGATGCGCCACATGCGCAGCGCACATACGGGAGCGCAGTTCAAGTGTCCACTGTGCCGGAAGTGTCTCTGTTCGGCGAGTTCCTTACGGGAACATGTTTTGACCCACAGCCGGGTGAAGACCTATATGTGCCAGTTGTGCCCAAAGTCTTACCACGCGAAAAAATCAATAACGAAACACTTGCAGCATCGCCACGGCCTTAAACCTATCGACATCAATGCCAAACTGCACTACCGGCATCTCGACCCCAAAGAATGCAACCTTGGTCTGGACGAAGAAGTCATGAATAAGATCTTCGGGAACACGAAGAAGAAACCCAACACAGACTTACTCATCGGAGACTTTGTTACCTTCAACAATAGTCTGAAACTCGCAGAATCTCAAAACTCGCAAATTCAAGGATCAAGCAAAGGCGTTGATCCTTCGGAAAGTCACCAGAGTAAAGAAGAGATAGTAAGAACGGATAAAATGCGGATAAAGCTGGAGCCGgtcgacgatgatgatgatgacatggaAAGGGAGGAGCTTCCTCCACCAGATTTTGTGAATGTGAAGATTGAGTGCGTGGAAGAACCTGATGCTGAAATGGACTAG
Protein Sequence: MASDDSEDEPLSVLAALKKRDNLGLEILPVFESAEGSTETKSVKKYCDVSIELQPLVGNAITPKVERPADVWLYMTELKQTGPYSCLLCSEWFINKTRIVIHYIVDHKKDFCGICRYFVPNREAWWEHLKFHMPWKCSQCEESFMSQIALREHFSSVHKLVHCRLCHLRLPDDEQYRNHLYQKHCITTFASIYGETFWDFEYEGSQKFLCLLCSKSISVGRAFADHFMAYHHLTLKCFAVVLSGTDLPFSIKGVDLSSDFIYTQLKDYSSYGYVDFVQNMKIEPEPVHDEVTITVDCDPGIKESILIHQEQNFKFNEDIKGYRGDEDFDITLMELVTMQKCYFKYLNETLHNICSKVMPQSSNITYVNADGLQKINCCLCKDVFKTVNTFETHMTKVHCLKILPLYWCRVCAAVFDSIDKLEGHSKQELGEFEDLWICQFCDKEFDTREDTRKHLTEHWNVLEYDNCFSPHLGFKCKFCPTLFWNETDREAHHVRVHFQTHISDFYKCTSCREVFGDKVFFIHHYLEKHSSNNPSYLLKCSLCSIVLHTVEEMRCHFEAGHPEARRLFCSLDPCKFKPFSHRKSFLLHLKGMHDPAARPPRTTCLVCGLEFGSAKACTLHTTMAHGPGKFKCTICNEMLQTSDERKIHYLIRHPGRYQYQCDACDKSFQYKSSLYMHRQDHSPNKKDFTCGFCGKVFLKRDSYREHVMIHQAPRHACSYCPMRFVQRSNMLRHERRHTGERPYACKFCPRTFADKGACTSHSRTHLKNTSYACVYCGQTFVQKSKLTYHIRKHTGENLETCSLCSKIFTSACSLREHLKVHQRKKMKKTVKCPLCKNMYPDEKDMMRHMRSAHTGAQFKCPLCRKCLCSASSLREHVLTHSRVKTYMCQLCPKSYHAKKSITKHLQHRHGLKPIDINAKLHYRHLDPKECNLGLDEEVMNKIFGNTKKKPNTDLLIGDFVTFNNSLKLAESQNSQIQGSSKGVDPSESHQSKEEIVRTDKMRIKLEPVDDDDDDMEREELPPPDFVNVKIECVEEPDAEMD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -